Beta-carotene isomerase D27
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G64680 AT1G64680 |
| fragaria_vesca | FvH4_5g10820 |
| malus_domestica | MD14G1137300.v1.1 |
| prunus_persica | Prupe.5G131200_v2.0.a1 |
| pyrus_communis | pycom14g11240 |
| rosa_chinensis | RchiOBHm_Chr7g0187341 |
| rosa_laevigata | RLG00000004793 |
| rosa_roxburghii | Rroxscaffold_3G00267590 |
| rosa_rugosa | Rorug06G0480700 |
| rosa_samantha | Rh7AG085200 Rh7BG077400 Rh7CG086200 Rh7DG087300 |
| rosa_wichuraiana | Rw7G007490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 530 |
| AfaI | GTAC | 1 cut(s) | 85 |
| AgsI | TTSAA | 2 cut(s) | 20, 430 |
| AhlI | ACTAGT | 1 cut(s) | 86 |
| AjnI | CCWGG | 1 cut(s) | 370 |
| AluBI | AGCT | 3 cut(s) | 128, 218, 579 |
| AluI | AGCT | 3 cut(s) | 128, 218, 579 |
| Alw26I | GTCTC | 1 cut(s) | 321 |
| AoxI | GGCC | 1 cut(s) | 470 |
| ApeKI | GCWGC | 4 cut(s) | 328, 419, 434, 588 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 176 |
| AspLEI | GCGC | 1 cut(s) | 379 |
| AspS9I | GGNCC | 1 cut(s) | 470 |
| BbsI | GAAGAC | 1 cut(s) | 506 |
| BbvI | GCAGC | 3 cut(s) | 340, 406, 421 |
| BccI | CCATC | 2 cut(s) | 121, 152 |
| BciT130I | CCWGG | 1 cut(s) | 372 |
| BciVI | GTATCC | 1 cut(s) | 301 |
| BcoDI | GTCTC | 1 cut(s) | 321 |
| BcuI | ACTAGT | 1 cut(s) | 86 |
| BfaI | CTAG | 1 cut(s) | 87 |
| BfmI | CTRYAG | 1 cut(s) | 420 |
| BfuI | GTATCC | 1 cut(s) | 301 |
| BisI | GCNGC | 4 cut(s) | 329, 420, 435, 589 |
| BlsI | GCNGC | 4 cut(s) | 330, 421, 436, 590 |
| BmcAI | AGTACT | 1 cut(s) | 85 |
| Bme1390I | CCNGG | 1 cut(s) | 372 |
| BmgT120I | GGNCC | 1 cut(s) | 470 |
| BmrFI | CCNGG | 1 cut(s) | 372 |
| BpiI | GAAGAC | 1 cut(s) | 506 |
| BpmI | CTGGAG | 2 cut(s) | 204, 354 |
| BsaI | GGTCTC | 1 cut(s) | 321 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 338, 368 |
| Bse1I | ACTGG | 3 cut(s) | 79, 221, 464 |
| BseBI | CCWGG | 1 cut(s) | 372 |
| BseMII | CTCAG | 3 cut(s) | 228, 398, 468 |
| BseNI | ACTGG | 3 cut(s) | 79, 221, 464 |
| BseXI | GCAGC | 3 cut(s) | 340, 406, 421 |
| BshFI | GGCC | 1 cut(s) | 472 |
| BsmAI | GTCTC | 1 cut(s) | 321 |
| BsmI | GAATGC | 2 cut(s) | 176, 321 |
| BsnI | GGCC | 1 cut(s) | 472 |
| Bso31I | GGTCTC | 1 cut(s) | 321 |
| BspANI | GGCC | 1 cut(s) | 472 |
| BspCNI | CTCAG | 3 cut(s) | 229, 397, 469 |
| BspHI | TCATGA | 1 cut(s) | 180 |
| BspMAI | CTGCAG | 1 cut(s) | 424 |
| BspTNI | GGTCTC | 1 cut(s) | 321 |
| BsrI | ACTGG | 3 cut(s) | 79, 221, 464 |
| Bst2UI | CCWGG | 1 cut(s) | 372 |
| Bst4CI | ACNGT | 1 cut(s) | 445 |
| Bst6I | CTCTTC | 2 cut(s) | 194, 200 |
| BstC8I | GCNNGC | 2 cut(s) | 196, 381 |
| BstDEI | CTNAG | 3 cut(s) | 237, 384, 477 |
| BstHHI | GCGC | 1 cut(s) | 379 |
| BstMAI | GTCTC | 1 cut(s) | 321 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 585 |
| BstNI | CCWGG | 1 cut(s) | 372 |
| BstSCI | CCNGG | 1 cut(s) | 370 |
| BstSFI | CTRYAG | 1 cut(s) | 420 |
| BstV1I | GCAGC | 3 cut(s) | 340, 406, 421 |
| BstV2I | GAAGAC | 1 cut(s) | 506 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 414 |
| BsuI | GTATCC | 1 cut(s) | 301 |
| BsuRI | GGCC | 1 cut(s) | 472 |
| BtsIMutI | CAGTG | 5 cut(s) | 72, 228, 450, 457, 590 |
| Cac8I | GCNNGC | 2 cut(s) | 196, 381 |
| CciI | TCATGA | 1 cut(s) | 180 |
| CfoI | GCGC | 1 cut(s) | 379 |
| Cfr13I | GGNCC | 1 cut(s) | 470 |
| Csp6I | GTAC | 1 cut(s) | 84 |
| CviAII | CATG | 2 cut(s) | 181, 522 |
| CviJI | RGCY | 8 cut(s) | 15, 112, 128, 218, 419, 472, 507, 579 |
| CviKI_1 | RGCY | 8 cut(s) | 15, 112, 128, 218, 419, 472, 507, 579 |
| CviQI | GTAC | 1 cut(s) | 84 |
| DdeI | CTNAG | 3 cut(s) | 237, 384, 477 |
| Eam1104I | CTCTTC | 2 cut(s) | 194, 200 |
| EarI | CTCTTC | 2 cut(s) | 194, 200 |
| Eco31I | GGTCTC | 1 cut(s) | 321 |
| EcoRII | CCWGG | 1 cut(s) | 370 |
| FaeI | CATG | 2 cut(s) | 184, 525 |
| FatI | CATG | 2 cut(s) | 180, 521 |
| Fnu4HI | GCNGC | 4 cut(s) | 329, 420, 435, 589 |
| Fsp4HI | GCNGC | 4 cut(s) | 329, 420, 435, 589 |
| FspBI | CTAG | 1 cut(s) | 87 |
| GlaI | GCGC | 1 cut(s) | 378 |
| GluI | GCNGC | 4 cut(s) | 329, 420, 435, 589 |
| GsuI | CTGGAG | 2 cut(s) | 204, 354 |
| HaeIII | GGCC | 1 cut(s) | 472 |
| HhaI | GCGC | 1 cut(s) | 379 |
| Hin1II | CATG | 2 cut(s) | 184, 525 |
| Hin6I | GCGC | 1 cut(s) | 377 |
| HinP1I | GCGC | 1 cut(s) | 377 |
| Hpy166II | GTNNAC | 1 cut(s) | 286 |
| Hpy188I | TCNGA | 1 cut(s) | 478 |
| Hpy188III | TCNNGA | 2 cut(s) | 117, 181 |
| Hpy8I | GTNNAC | 1 cut(s) | 286 |
| HpyAV | CCTTC | 3 cut(s) | 26, 306, 483 |
| HpyCH4III | ACNGT | 1 cut(s) | 445 |
| HpyCH4IV | ACGT | 1 cut(s) | 288 |
| HpyCH4V | TGCA | 5 cut(s) | 107, 307, 422, 437, 588 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 585 |
| HpyF3I | CTNAG | 3 cut(s) | 237, 384, 477 |
| HpySE526I | ACGT | 1 cut(s) | 288 |
| Hsp92II | CATG | 2 cut(s) | 184, 525 |
| HspAI | GCGC | 1 cut(s) | 377 |
| LmnI | GCTCC | 2 cut(s) | 133, 223 |
| Lsp1109I | GCAGC | 3 cut(s) | 340, 406, 421 |
| MaeI | CTAG | 1 cut(s) | 87 |
| MaeII | ACGT | 1 cut(s) | 288 |
| MaeIII | GTNAC | 2 cut(s) | 481, 493 |
| MboII | GAAGA | 4 cut(s) | 181, 217, 445, 506 |
| MluCI | AATT | 3 cut(s) | 29, 395, 562 |
| MnlI | CCTC | 5 cut(s) | 201, 238, 340, 378, 472 |
| MroXI | GAANNNNTTC | 1 cut(s) | 176 |
| MseI | TTAA | 2 cut(s) | 11, 440 |
| MspR9I | CCNGG | 1 cut(s) | 372 |
| Mva1269I | GAATGC | 2 cut(s) | 176, 321 |
| MvaI | CCWGG | 1 cut(s) | 372 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 585 |
| NlaIII | CATG | 2 cut(s) | 184, 525 |
| NmuCI | GTSAC | 1 cut(s) | 493 |
| PagI | TCATGA | 1 cut(s) | 180 |
| PctI | GAATGC | 2 cut(s) | 176, 321 |
| PdmI | GAANNNNTTC | 1 cut(s) | 176 |
| PkrI | GCNGC | 4 cut(s) | 330, 421, 436, 590 |
| PsiI | TTATAA | 1 cut(s) | 530 |
| Psp6I | CCWGG | 1 cut(s) | 370 |
| PspGI | CCWGG | 1 cut(s) | 370 |
| PspPI | GGNCC | 1 cut(s) | 470 |
| PstI | CTGCAG | 1 cut(s) | 424 |
| RsaI | GTAC | 1 cut(s) | 85 |
| RsaNI | GTAC | 1 cut(s) | 84 |
| SaqAI | TTAA | 2 cut(s) | 11, 440 |
| SatI | GCNGC | 4 cut(s) | 329, 420, 435, 589 |
| Sau96I | GGNCC | 1 cut(s) | 470 |
| ScaI | AGTACT | 1 cut(s) | 85 |
| ScrFI | CCNGG | 1 cut(s) | 372 |
| SfcI | CTRYAG | 1 cut(s) | 420 |
| SpeI | ACTAGT | 1 cut(s) | 86 |
| Sse9I | AATT | 3 cut(s) | 29, 395, 562 |
| SspMI | CTAG | 1 cut(s) | 87 |
| StyD4I | CCNGG | 1 cut(s) | 370 |
| TaaI | ACNGT | 1 cut(s) | 445 |
| TaiI | ACGT | 1 cut(s) | 291 |
| TaqI | TCGA | 1 cut(s) | 94 |
| TasI | AATT | 3 cut(s) | 29, 395, 562 |
| TatI | WGTACW | 1 cut(s) | 83 |
| Tru1I | TTAA | 2 cut(s) | 11, 440 |
| Tru9I | TTAA | 2 cut(s) | 11, 440 |
| TscAI | CASTG | 5 cut(s) | 79, 228, 450, 464, 590 |
| TseFI | GTSAC | 1 cut(s) | 493 |
| TseI | GCWGC | 4 cut(s) | 328, 419, 434, 588 |
| Tsp45I | GTSAC | 1 cut(s) | 493 |
| TspDTI | ATGAA | 2 cut(s) | 169, 218 |
| TspRI | CASTG | 5 cut(s) | 79, 228, 450, 464, 590 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 411, 464 |
| XmnI | GAANNNNTTC | 1 cut(s) | 176 |
| XspI | CTAG | 1 cut(s) | 87 |
| ZrmI | AGTACT | 1 cut(s) | 85 |