Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0012278

Physical Location & Seq

Genomic Coordinates Reverse (-)

8476478 .. 8481142

Gene Structure 4665 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0108700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2046 bp

ATGCAACTCCTCCAAACCCCTCACCAATTCCTCTTCACCTTCCCTCCCCCTAAAACCCTAAACCCTTCTCCCCACTCCAAACCCCAACCTCCCAAATGGACGACCATTCCTTATCTCTTCCCCCTCACCCATTCCCCTCCCACCAACCCCTTCAAACCCAAAGCCTTGAGCTCCGACGAGTTCCCCGTCGACGAGACCTTCCTCCAGAACTTCGGCCCAAAGGACAAGGAAACCGAAGACGAGGCCCGCAAGCGCAACTGGGTCGAGCGCGGCTGGGCCCCCTGGGAGGAGGTCCTCACCCCCGAGGCCGATTTCGCGCGCAAATCCCTCAACGAAGGCGAAGAGGTCGCCCTCCAGTCCCCCGAGGCCATCGAGGCCTTCAAGATGCTCCGGCCGAGTTACCGGAAGAAGAAGATGGAGGAGATGGGGCTCACGGAGGACGACTACTACCGGAAACAGTTCCAGATTAAGGGGAATATTCCGGAGCCGTTGGAGACGGTCTGGGCCGGCCCGCTCGTGGTGAGACAGGTGCCGCCCAGGGATTGGCCGCCCAGGGATTGGGAGGTGGATAAGGAGGAGCTGGAGTATATAAGAGGAGCTCATAAGTTGCAAGCAGTGAGGGTAAAGCTGAGAGATTTGGAGAGTGGGGCTAAAGTGGAAAATGATGAGCTGTGTTTGGATAGGTATAAGGTGTTTTTGAAGCAGTATAAGGAGTGGGTCGCCGCGAATAAGGATCGATTGGAGGAGGAGTCTTATAAGTATGACCAAGATTACCATCCGGGAAGGAGGAAGAGAGGCAAGGACTACAAAGAGGGCATGTATGAACTTCCGTTTTATTACCCCGGACAAATCTGTGAAGGAAAAGTGACATCTATACATCTGTATCAAGGAGCATTTGTGGACATCGGAGGTGTATATGATGGGTGGGTTCCTATAAAAAATAACGACTGGTACTGGATCCGCCATCACATAAAAGTTGGTATGCGTGTCATGGTTGAAATTCTGGCAAAACGAGATCCTTATCGCTTTCGGTTTCCAATTGAATTGCGTTTTGTCTATCCGAATATAGACCACCTTATCTTTAACAGGTTTGACTTTCCACCAATATTTCATCATGATGAAGATACTAATCCAGACGAATTACGGCGTGATTGTGGAAGACCTCCTGTGCCCAGGAAGGATCCAAAAGATAAGCCCGTAGAGGAACCGTTATTGTCAAATCACCCTTATGTTGATAAGTTGTGGCAGATACATGTTGCTGAACAGATGATTTTGGATGATGTGGAGGCTAATCCTGGGAAATATAAAGACAAAAAACTATCAGAGTTAACTGATACTGAAGATTTGAATGAAGAAAATAGTATTGAATATACAAAAGCTTATTATAAGAAAACCTTAGTACCAAAAGTGATTCTGAAAACAAGCGTTAAAGAACTTGACCTGGAGGCTGCCTTTGCTGAGCGTCAGCTACGTAACACACTAAGAAGGGAGACAGAAGAGAGAGGAGAGGAATACAAAGTTACCAAAATGAGGCGCAATGTTGAGATGGATGAGTATGACTTCTTACATTGGCGTCGATCATTGGAGGAAAGAGAAGCTTTGATCAGAGATATAAGCTGCCGTAAAGCTCTTGGTCTATCACTGGAAGAGCCGGGGAGGTATGTGGAAGACAGCTATTTTGGAAAGGATCAATATGACCCGGACAACGCTCTATACCGGTATGACTACTGGGGAGAACCGAAAAACTCAGAGAAGAGCAAGCAAGAACGGCTGACAGATGCTCACAACAAAGCTATTGTTGGAAAGAGTACCGTGTGGTATGAAATGTCATATGACGATTGCATCAAACAGCGGATGCAAAGAGAAGCCAAGGGGATAAAACCAAGAGAATATGAGGAAGATACAAACACAGGTGACGATGATGAAGACGACGATGACGACTTTGATTTCAGCTTCTTGAATGAAACTGTTGATATGACCTCCCAGCCCCATGTTAATGGGACAGAATCTCCTACAATTTCCGATGAGGGCATATTTGAGGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0009507 GO:0009536 GO:0009579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00260 ko00630 ko01100 ko01110 ko01130 ko01200 map00260 map00630 map01100 map01110 map01130 map01200

Pfam Domains

Protein Families

GCV_H

Protein Analysis

681

Amino Acids

80.69

Weight (kDa)

5.15

Isoelectric Point (pI)

47.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012278)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32470 AT2G35370
fragaria_vesca	FvH4_5g21610 FvH4_5g21610
malus_domestica	MD06G1031000.v1.1 MD16G1277700.v1.1
prunus_persica	Prupe.5G041300_v2.0.a1
pyrus_communis	pycom06g02580 pycom16g24690
rosa_chinensis	RchiOBHm_Chr7g0209071
rosa_laevigata	RLG00000003170
rosa_multiflora	Rmu_co8473347.1_g000001
rosa_roxburghii	Rroxscaffold_3G00249780
rosa_rugosa	Rorug07G0108700
rosa_samantha	Rh7AG243200 Rh7BG238200 Rh7CG258400 Rh7DG250200
rosa_wichuraiana	Rw7G020610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	756, 1386
AccB1I	GGYRCC	1 cut(s)	529
AccB7I	CCANNNNNTGG	2 cut(s)	543, 558
AccBSI	CCGCTC	1 cut(s)	514
AccI	GTMKAC	1 cut(s)	189
AccII	CGCG	4 cut(s)	270, 317, 319, 725
AccIII	TCCGGA	1 cut(s)	481
AciI	CCGC	8 cut(s)	247, 270, 512, 533, 548, 723, 961, 1852
AclWI	GGATC	7 cut(s)	741, 952, 965, 1010, 1175, 1188, 1695
AcoI	YGGCCR	2 cut(s)	392, 545
AcsI	RAATTY	1 cut(s)	999
AcuI	CTGAAG	1 cut(s)	1359
AcyI	GRCGYC	1 cut(s)	1573
AfaI	GTAC	3 cut(s)	953, 1401, 1810
AfiI	CCNNNNNNNGG	6 cut(s)	286, 469, 517, 543, 558, 1530
AflIII	ACRYGT	1 cut(s)	1252
AgeI	ACCGGT	1 cut(s)	1716
AgsI	TTSAA	8 cut(s)	154, 382, 700, 998, 1043, 1348, 1367, 1960
AjnI	CCWGG	6 cut(s)	281, 536, 551, 1172, 1294, 1440
Alw21I	GWGCWC	2 cut(s)	173, 601
Alw26I	GTCTC	4 cut(s)	188, 488, 517, 1484
AlwI	GGATC	7 cut(s)	741, 952, 965, 1010, 1175, 1188, 1695
Ama87I	CYCGRG	2 cut(s)	302, 362
Aor13HI	TCCGGA	1 cut(s)	481
ApaI	GGGCCC	1 cut(s)	280
ApeKI	GCWGC	2 cut(s)	1448, 1617
ApoI	RAATTY	1 cut(s)	999
ArsI	GACNNNNNNTTYG	2 cut(s)	1661, 1693
AsiGI	ACCGGT	1 cut(s)	1716
Asp700I	GAANNNNTTC	1 cut(s)	458
AspLEI	GCGC	5 cut(s)	255, 270, 319, 321, 1536
AspS9I	GGNCC	7 cut(s)	215, 244, 276, 277, 292, 504, 509
AsuC2I	CCSGG	4 cut(s)	780, 843, 1653, 1700
AsuHPI	GGTGA	7 cut(s)	14, 28, 118, 289, 532, 1214, 1925
AvaI	CYCGRG	2 cut(s)	302, 362
AvaII	GGWCC	1 cut(s)	292
BaeGI	GKGCMC	2 cut(s)	280, 1173
BaeI	ACNNNNGTAYC	4 cut(s)	866, 899, 1383, 1416
BamHI	GGATCC	2 cut(s)	957, 1180
BanI	GGYRCC	1 cut(s)	529
BanII	GRGCYC	4 cut(s)	173, 280, 432, 601
BauI	CACGAG	1 cut(s)	515
BbsI	GAAGAC	4 cut(s)	243, 1165, 1674, 1932
Bbv12I	GWGCWC	2 cut(s)	173, 601
BbvI	GCAGC	2 cut(s)	1435, 1604
BccI	CCATC	7 cut(s)	377, 409, 418, 783, 914, 972, 1540
BceAI	ACGGC	4 cut(s)	472, 1160, 1605, 1784
BcgI	CGANNNNNNTGC	2 cut(s)	244, 278
BciT130I	CCWGG	6 cut(s)	283, 538, 553, 1174, 1296, 1442
BclI	TGATCA	1 cut(s)	1602
BcnI	CCSGG	4 cut(s)	780, 843, 1653, 1700
BcoDI	GTCTC	4 cut(s)	188, 488, 517, 1484
BglI	GCCNNNNNGGC	1 cut(s)	374
BisI	GCNGC	6 cut(s)	271, 533, 548, 723, 1449, 1618
BlpI	GCTNAGC	1 cut(s)	1458
BlsI	GCNGC	6 cut(s)	272, 534, 549, 724, 1450, 1619
Bme18I	GGWCC	1 cut(s)	292
BmeT110I	CYCGRG	2 cut(s)	302, 362
BmgT120I	GGNCC	7 cut(s)	215, 244, 276, 277, 292, 504, 509
BmiI	GGNNCC	8 cut(s)	278, 279, 486, 531, 930, 959, 1182, 1206
BmrI	ACTGGG	2 cut(s)	268, 1738
BmsI	GCATC	4 cut(s)	375, 1768, 1845, 1851
BmuI	ACTGGG	2 cut(s)	268, 1738
BpiI	GAAGAC	4 cut(s)	243, 1165, 1674, 1932
BpmI	CTGGAG	4 cut(s)	188, 338, 602, 1463
Bpu1102I	GCTNAGC	1 cut(s)	1458
BpuEI	CTTGAG	1 cut(s)	187
BpuMI	CCSGG	4 cut(s)	780, 843, 1653, 1700
Bsa29I	ATCGAT	1 cut(s)	736
BsaAI	YACGTR	1 cut(s)	1472
BsaBI	GATNNNNATC	3 cut(s)	774, 1020, 1128
BsaHI	GRCGYC	1 cut(s)	1573
BsaI	GGTCTC	1 cut(s)	188
BsaWI	WCCGGW	4 cut(s)	402, 450, 481, 1716
Bsc4I	CCNNNNNNNGG	6 cut(s)	286, 469, 517, 543, 558, 1530
Bse118I	RCCGGY	2 cut(s)	506, 1716
Bse1I	ACTGG	6 cut(s)	263, 355, 953, 959, 1647, 1733
Bse3DI	GCAATG	1 cut(s)	1543
Bse8I	GATNNNNATC	3 cut(s)	774, 1020, 1128
BseAI	TCCGGA	1 cut(s)	481
BseBI	CCWGG	6 cut(s)	283, 538, 553, 1174, 1296, 1442
BseCI	ATCGAT	1 cut(s)	736
BseGI	GGATG	4 cut(s)	775, 1282, 1555, 1860
BseJI	GATNNNNATC	3 cut(s)	774, 1020, 1128
BseLI	CCNNNNNNNGG	6 cut(s)	286, 469, 517, 543, 558, 1530
BseMI	GCAATG	1 cut(s)	1543
BseMII	CTCAG	3 cut(s)	620, 1449, 1761
BseNI	ACTGG	6 cut(s)	263, 355, 953, 959, 1647, 1733
BsePI	GCGCGC	1 cut(s)	317
BseRI	GAGGAG	7 cut(s)	302, 434, 590, 609, 758, 761, 1518
BseSI	GKGCMC	2 cut(s)	280, 1173
BseX3I	CGGCCG	1 cut(s)	392
BseXI	GCAGC	2 cut(s)	1435, 1604
BseYI	CCCAGC	2 cut(s)	273, 1983
Bsh1236I	CGCG	4 cut(s)	270, 317, 319, 725
Bsh1285I	CGRYCG	1 cut(s)	395
BshNI	GGYRCC	1 cut(s)	529
BshTI	ACCGGT	1 cut(s)	1716
BshVI	ATCGAT	1 cut(s)	736
BsiEI	CGRYCG	1 cut(s)	395
BsiHKAI	GWGCWC	2 cut(s)	173, 601
BsiHKCI	CYCGRG	2 cut(s)	302, 362
BslFI	GGGAC	2 cut(s)	343, 2014
BslI	CCNNNNNNNGG	6 cut(s)	286, 469, 517, 543, 558, 1530
BsmAI	GTCTC	4 cut(s)	188, 488, 517, 1484
BsmBI	CGTCTC	1 cut(s)	488
BsmFI	GGGAC	2 cut(s)	343, 2014
Bso31I	GGTCTC	1 cut(s)	188
BsoBI	CYCGRG	2 cut(s)	302, 362
Bsp120I	GGGCCC	1 cut(s)	276
Bsp1286I	GDGCHC	5 cut(s)	173, 280, 432, 601, 1173
Bsp13I	TCCGGA	1 cut(s)	481
Bsp143I	GATC	7 cut(s)	733, 957, 1015, 1180, 1577, 1602, 1687
Bsp1720I	GCTNAGC	1 cut(s)	1458
BspACI	CCGC	8 cut(s)	247, 270, 512, 533, 548, 723, 961, 1852
BspCNI	CTCAG	3 cut(s)	621, 1450, 1760
BspDI	ATCGAT	1 cut(s)	736
BspEI	TCCGGA	1 cut(s)	481
BspFNI	CGCG	4 cut(s)	270, 317, 319, 725
BspHI	TCATGA	1 cut(s)	1114
BspLI	GGNNCC	8 cut(s)	278, 279, 486, 531, 930, 959, 1182, 1206
BspPI	GGATC	7 cut(s)	741, 952, 965, 1010, 1175, 1188, 1695
BspQI	GCTCTTC	2 cut(s)	1641, 1748
BspT107I	GGYRCC	1 cut(s)	529
BspTNI	GGTCTC	1 cut(s)	188
BsrBI	CCGCTC	1 cut(s)	514
BsrDI	GCAATG	1 cut(s)	1543
BsrFI	RCCGGY	2 cut(s)	506, 1716
BsrI	ACTGG	6 cut(s)	263, 355, 953, 959, 1647, 1733
BssAI	RCCGGY	2 cut(s)	506, 1716
BssHII	GCGCGC	1 cut(s)	317
BssMI	GATC	7 cut(s)	733, 957, 1015, 1180, 1577, 1602, 1687
BssNI	GRCGYC	1 cut(s)	1573
BssSI	CACGAG	1 cut(s)	515
BssT1I	CCWWGG	1 cut(s)	1869
Bst2BI	CACGAG	1 cut(s)	515
Bst2UI	CCWGG	6 cut(s)	283, 538, 553, 1174, 1296, 1442
Bst4CI	ACNGT	5 cut(s)	459, 499, 1209, 1813, 1969
Bst6I	CTCTTC	7 cut(s)	38, 122, 336, 785, 1491, 1641, 1748
BstACI	GRCGYC	1 cut(s)	1573
BstBAI	YACGTR	1 cut(s)	1472
BstC8I	GCNNGC	7 cut(s)	247, 251, 319, 508, 512, 612, 1760
BstDEI	CTNAG	5 cut(s)	629, 1396, 1458, 1481, 1747
BstF5I	GGATG	4 cut(s)	775, 1282, 1555, 1860
BstFNI	CGCG	4 cut(s)	270, 317, 319, 725
BstHHI	GCGC	5 cut(s)	255, 270, 319, 321, 1536
BstKTI	GATC	7 cut(s)	736, 960, 1018, 1183, 1580, 1605, 1690
BstMAI	GTCTC	4 cut(s)	188, 488, 517, 1484
BstMBI	GATC	7 cut(s)	733, 957, 1015, 1180, 1577, 1602, 1687
BstMCI	CGRYCG	1 cut(s)	395
BstMWI	GCNNNNNNNGC	4 cut(s)	314, 374, 1454, 1768
BstNI	CCWGG	6 cut(s)	283, 538, 553, 1174, 1296, 1442
BstNSI	RCATGY	2 cut(s)	820, 1256
BstSLI	GKGCMC	2 cut(s)	280, 1173
BstSNI	TACGTA	1 cut(s)	1472
BstUI	CGCG	4 cut(s)	270, 317, 319, 725
BstV1I	GCAGC	2 cut(s)	1435, 1604
BstV2I	GAAGAC	4 cut(s)	243, 1165, 1674, 1932
BstX2I	RGATCY	3 cut(s)	957, 1015, 1180
BstXI	CCANNNNNNTGG	1 cut(s)	1997
BstYI	RGATCY	3 cut(s)	957, 1015, 1180
BstZI	CGGCCG	1 cut(s)	392
Bsu15I	ATCGAT	1 cut(s)	736
BsuTUI	ATCGAT	1 cut(s)	736
BtsCI	GGATG	4 cut(s)	775, 1282, 1555, 1860
BtsI	GCAGTG	1 cut(s)	621
BtsIMutI	CAGTG	2 cut(s)	621, 1640
Cac8I	GCNNGC	7 cut(s)	247, 251, 319, 508, 512, 612, 1760
CciI	TCATGA	1 cut(s)	1114
CfoI	GCGC	5 cut(s)	255, 270, 319, 321, 1536
Cfr10I	RCCGGY	2 cut(s)	506, 1716
Cfr13I	GGNCC	7 cut(s)	215, 244, 276, 277, 292, 504, 509
ClaI	ATCGAT	1 cut(s)	736
CseI	GACGC	2 cut(s)	1451, 1562
Csp6I	GTAC	3 cut(s)	952, 1400, 1809
CspAI	ACCGGT	1 cut(s)	1716
CviAII	CATG	5 cut(s)	817, 991, 1115, 1253, 1991
CviQI	GTAC	3 cut(s)	952, 1400, 1809
DdeI	CTNAG	5 cut(s)	629, 1396, 1458, 1481, 1747
DpnI	GATC	7 cut(s)	735, 959, 1017, 1182, 1579, 1604, 1689
DpnII	GATC	7 cut(s)	733, 957, 1015, 1180, 1577, 1602, 1687
EaeI	YGGCCR	2 cut(s)	392, 545
EagI	CGGCCG	1 cut(s)	392
Eam1104I	CTCTTC	7 cut(s)	38, 122, 336, 785, 1491, 1641, 1748
EarI	CTCTTC	7 cut(s)	38, 122, 336, 785, 1491, 1641, 1748
EciI	GGCGGA	1 cut(s)	950
Ecl136II	GAGCTC	2 cut(s)	171, 599
EclXI	CGGCCG	1 cut(s)	392
Eco105I	TACGTA	1 cut(s)	1472
Eco130I	CCWWGG	1 cut(s)	1869
Eco147I	AGGCCT	1 cut(s)	377
Eco24I	GRGCYC	4 cut(s)	173, 280, 432, 601
Eco31I	GGTCTC	1 cut(s)	188
Eco47I	GGWCC	1 cut(s)	292
Eco52I	CGGCCG	1 cut(s)	392
Eco53kI	GAGCTC	2 cut(s)	171, 599
Eco57I	CTGAAG	1 cut(s)	1359
Eco88I	CYCGRG	2 cut(s)	302, 362
EcoICRI	GAGCTC	2 cut(s)	171, 599
EcoO109I	RGGNCCY	2 cut(s)	277, 292
EcoRII	CCWGG	6 cut(s)	281, 536, 551, 1172, 1294, 1440
EcoT14I	CCWWGG	1 cut(s)	1869
EcoT38I	GRGCYC	4 cut(s)	173, 280, 432, 601
ErhI	CCWWGG	1 cut(s)	1869
Esp3I	CGTCTC	1 cut(s)	488
FaeI	CATG	5 cut(s)	820, 994, 1118, 1256, 1994
FalI	AAGNNNNNCTT	4 cut(s)	1379, 1411, 1582, 1614
FaqI	GGGAC	2 cut(s)	343, 2014
FatI	CATG	5 cut(s)	816, 990, 1114, 1252, 1990
FauI	CCCGC	2 cut(s)	254, 519
FauNDI	CATATG	1 cut(s)	1831
FbaI	TGATCA	1 cut(s)	1602
FblI	GTMKAC	1 cut(s)	189
Fnu4HI	GCNGC	6 cut(s)	271, 533, 548, 723, 1449, 1618
FokI	GGATG	4 cut(s)	762, 1289, 1562, 1867
FriOI	GRGCYC	4 cut(s)	173, 280, 432, 601
FseI	GGCCGGCC	1 cut(s)	510
Fsp4HI	GCNGC	6 cut(s)	271, 533, 548, 723, 1449, 1618
GlaI	GCGC	5 cut(s)	254, 269, 318, 320, 1535
GluI	GCNGC	6 cut(s)	271, 533, 548, 723, 1449, 1618
GsaI	CCCAGC	2 cut(s)	277, 1987
GsuI	CTGGAG	4 cut(s)	188, 338, 602, 1463
HgaI	GACGC	2 cut(s)	1451, 1562
HhaI	GCGC	5 cut(s)	255, 270, 319, 321, 1536
Hin1I	GRCGYC	1 cut(s)	1573
Hin1II	CATG	5 cut(s)	820, 994, 1118, 1256, 1994
Hin6I	GCGC	5 cut(s)	253, 268, 317, 319, 1534
HinP1I	GCGC	5 cut(s)	253, 268, 317, 319, 1534
HincII	GTYRAC	2 cut(s)	190, 1329
HindII	GTYRAC	2 cut(s)	190, 1329
HindIII	AAGCTT	2 cut(s)	1377, 1596
HinfI	GANTC	3 cut(s)	749, 1411, 2006
HpaI	GTTAAC	1 cut(s)	1329
HphI	GGTGA	7 cut(s)	14, 28, 118, 289, 532, 1214, 1925
Hpy166II	GTNNAC	3 cut(s)	190, 901, 1329
Hpy188I	TCNGA	8 cut(s)	175, 908, 1062, 1324, 1416, 1607, 1750, 2023
Hpy188III	TCNNGA	7 cut(s)	205, 382, 463, 482, 1115, 1133, 1957
Hpy8I	GTNNAC	3 cut(s)	190, 901, 1329
Hpy99I	CGWCG	5 cut(s)	179, 191, 194, 1578, 1934
HpyCH4III	ACNGT	5 cut(s)	459, 499, 1209, 1813, 1969
HpyCH4IV	ACGT	1 cut(s)	1471
HpyCH4V	TGCA	4 cut(s)	4, 610, 1842, 1858
HpyF10VI	GCNNNNNNNGC	4 cut(s)	314, 374, 1454, 1768
HpyF3I	CTNAG	5 cut(s)	629, 1396, 1458, 1481, 1747
HpySE526I	ACGT	1 cut(s)	1471
Hsp92I	GRCGYC	1 cut(s)	1573
Hsp92II	CATG	5 cut(s)	820, 994, 1118, 1256, 1994
HspAI	GCGC	5 cut(s)	253, 268, 317, 319, 1534
Kpn2I	TCCGGA	1 cut(s)	481
KroI	GCCGGC	1 cut(s)	506
KroNI	GCCGGC	1 cut(s)	508
Ksp22I	TGATCA	1 cut(s)	1602
KspAI	GTTAAC	1 cut(s)	1329
Kzo9I	GATC	7 cut(s)	733, 957, 1015, 1180, 1577, 1602, 1687
LguI	GCTCTTC	2 cut(s)	1641, 1748
LmnI	GCTCC	6 cut(s)	176, 393, 484, 577, 596, 890
Lsp1109I	GCAGC	2 cut(s)	1435, 1604
LweI	GCATC	4 cut(s)	375, 1768, 1845, 1851
MaeII	ACGT	1 cut(s)	1471
MaeIII	GTNAC	5 cut(s)	398, 865, 1472, 1519, 1913
MalI	GATC	7 cut(s)	735, 959, 1017, 1182, 1579, 1604, 1689
MbiI	CCGCTC	1 cut(s)	514
MboI	GATC	7 cut(s)	733, 957, 1015, 1180, 1577, 1602, 1687
MfeI	CAATTG	1 cut(s)	1038
MflI	RGATCY	3 cut(s)	957, 1015, 1180
MhlI	GDGCHC	5 cut(s)	173, 280, 432, 601, 1173
MluCI	AATT	6 cut(s)	26, 999, 1038, 1043, 1139, 2016
MlyI	GAGTC	1 cut(s)	758
MmeI	TCCRAC	3 cut(s)	198, 471, 1780
MroI	TCCGGA	1 cut(s)	481
MroNI	GCCGGC	1 cut(s)	506
MroXI	GAANNNNTTC	1 cut(s)	458
MseI	TTAA	6 cut(s)	468, 1083, 1328, 1428, 1995, 2044
MslI	CAYNNNNRTG	3 cut(s)	1116, 1227, 1995
MspA1I	CMGCKG	1 cut(s)	1852
MunI	CAATTG	1 cut(s)	1038
MvaI	CCWGG	6 cut(s)	283, 538, 553, 1174, 1296, 1442
MvnI	CGCG	4 cut(s)	270, 317, 319, 725
MwoI	GCNNNNNNNGC	4 cut(s)	314, 374, 1454, 1768
NaeI	GCCGGC	1 cut(s)	508
NciI	CCSGG	4 cut(s)	780, 843, 1653, 1700
NdeI	CATATG	1 cut(s)	1831
NdeII	GATC	7 cut(s)	733, 957, 1015, 1180, 1577, 1602, 1687
NgoMIV	GCCGGC	1 cut(s)	506
NlaIII	CATG	5 cut(s)	820, 994, 1118, 1256, 1994
NlaIV	GGNNCC	8 cut(s)	278, 279, 486, 531, 930, 959, 1182, 1206
NmeAIII	GCCGAG	1 cut(s)	420
NmuCI	GTSAC	2 cut(s)	865, 1913
NspI	RCATGY	2 cut(s)	820, 1256
PagI	TCATGA	1 cut(s)	1114
PasI	CCCWGGG	3 cut(s)	282, 537, 552
PauI	GCGCGC	1 cut(s)	317
PceI	AGGCCT	1 cut(s)	377
PciI	ACATGT	1 cut(s)	1252
PciSI	GCTCTTC	2 cut(s)	1641, 1748
PcsI	WCGNNNNNNNCGW	2 cut(s)	183, 1935
PdiI	GCCGGC	1 cut(s)	508
PdmI	GAANNNNTTC	1 cut(s)	458
PfeI	GAWTC	2 cut(s)	1411, 2006
PflMI	CCANNNNNTGG	2 cut(s)	543, 558
PfoI	TCCNGGA	1 cut(s)	778
PinAI	ACCGGT	1 cut(s)	1716
PkrI	GCNGC	6 cut(s)	272, 534, 549, 724, 1450, 1619
PleI	GAGTC	1 cut(s)	757
PpsI	GAGTC	1 cut(s)	757
Ppu21I	YACGTR	1 cut(s)	1472
PpuMI	RGGWCCY	1 cut(s)	292
PscI	ACATGT	1 cut(s)	1252
PsiI	TTATAA	2 cut(s)	756, 1386
Psp124BI	GAGCTC	2 cut(s)	173, 601
Psp5II	RGGWCCY	1 cut(s)	292
Psp6I	CCWGG	6 cut(s)	281, 536, 551, 1172, 1294, 1440
PspFI	CCCAGC	2 cut(s)	273, 1983
PspGI	CCWGG	6 cut(s)	281, 536, 551, 1172, 1294, 1440
PspN4I	GGNNCC	8 cut(s)	278, 279, 486, 531, 930, 959, 1182, 1206
PspOMI	GGGCCC	1 cut(s)	276
PspPI	GGNCC	7 cut(s)	215, 244, 276, 277, 292, 504, 509
PspPPI	RGGWCCY	1 cut(s)	292
PsuI	RGATCY	3 cut(s)	957, 1015, 1180
PteI	GCGCGC	1 cut(s)	317
RigI	GGCCGGCC	1 cut(s)	510
RsaI	GTAC	3 cut(s)	953, 1401, 1810
RsaNI	GTAC	3 cut(s)	952, 1400, 1809
RseI	CAYNNNNRTG	3 cut(s)	1116, 1227, 1995
SacI	GAGCTC	2 cut(s)	173, 601
SalI	GTCGAC	1 cut(s)	188
SapI	GCTCTTC	2 cut(s)	1641, 1748
SaqAI	TTAA	6 cut(s)	468, 1083, 1328, 1428, 1995, 2044
SatI	GCNGC	6 cut(s)	271, 533, 548, 723, 1449, 1618
Sau3AI	GATC	7 cut(s)	733, 957, 1015, 1180, 1577, 1602, 1687
Sau96I	GGNCC	7 cut(s)	215, 244, 276, 277, 292, 504, 509
SchI	GAGTC	1 cut(s)	758
SduI	GDGCHC	5 cut(s)	173, 280, 432, 601, 1173
SfaNI	GCATC	4 cut(s)	375, 1768, 1845, 1851
SfiI	GGCCNNNNNGGCC	1 cut(s)	374
SgrDI	CGTCGACG	1 cut(s)	188
SinI	GGWCC	1 cut(s)	292
SmiMI	CAYNNNNRTG	3 cut(s)	1116, 1227, 1995
SmlI	CTYRAG	1 cut(s)	166
SmoI	CTYRAG	1 cut(s)	166
SnaBI	TACGTA	1 cut(s)	1472
Sse9I	AATT	6 cut(s)	26, 999, 1038, 1043, 1139, 2016
SseBI	AGGCCT	1 cut(s)	377
SsiI	CCGC	8 cut(s)	247, 270, 512, 533, 548, 723, 961, 1852
SspI	AATATT	2 cut(s)	478, 1107
SstI	GAGCTC	2 cut(s)	173, 601
StuI	AGGCCT	1 cut(s)	377
StyI	CCWWGG	1 cut(s)	1869
TaaI	ACNGT	5 cut(s)	459, 499, 1209, 1813, 1969
TaiI	ACGT	1 cut(s)	1474
TaqI	TCGA	5 cut(s)	189, 264, 372, 736, 1576
TasI	AATT	6 cut(s)	26, 999, 1038, 1043, 1139, 2016
TauI	GCSGC	4 cut(s)	273, 535, 550, 725
TfiI	GAWTC	2 cut(s)	1411, 2006
Tru1I	TTAA	6 cut(s)	468, 1083, 1328, 1428, 1995, 2044
Tru9I	TTAA	6 cut(s)	468, 1083, 1328, 1428, 1995, 2044
TscAI	CASTG	2 cut(s)	621, 1647
TseFI	GTSAC	2 cut(s)	865, 1913
TseI	GCWGC	2 cut(s)	1448, 1617
Tsp45I	GTSAC	2 cut(s)	865, 1913
TspDTI	ATGAA	7 cut(s)	837, 1100, 1134, 1365, 1836, 1938, 1977
TspGWI	ACGGA	2 cut(s)	449, 819
TspRI	CASTG	2 cut(s)	621, 1647
Van91I	CCANNNNNTGG	2 cut(s)	543, 558
VpaK11BI	GGWCC	1 cut(s)	292
XapI	RAATTY	1 cut(s)	999
XceI	RCATGY	2 cut(s)	820, 1256
XmiI	GTMKAC	1 cut(s)	189
XmnI	GAANNNNTTC	1 cut(s)	458

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.