Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0011415

Physical Location & Seq

Genomic Coordinates Forward (+)

14780810 .. 14783199

Gene Structure 2390 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0178000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1185 bp

ATGACGTCGTATTTTGAGGATCAAGAAGACGACGGAGGAGGAGGCGGTTCCGATCACAGCACCAGCACCGGCACCGGCGACCCGGAGGATAACCGGAACAGTGAGGACAACAGGAACCGAGTCTTTTCGAGGCAGCTGGTTAATTTTGACGAAACGGCGATGCCGCTGAAGATGGAGCCCATTGACTCTGACCCACCGTCGGACTCTGACCACCGGGCCCACCCGCAACCGCCGCAGGCTCCGTCCGTCGGAATGGTCCCCATGGCGGCGATGCAGATGCAAATGCCCGTGCCGGTGTCCTCCTCCTCCGCCGCCGCCGCCGCGAGGCGCTCCTCCACCAAGGACCGCCACACGAAGGTCGAGGGCCGCGGCCGCAGGATCCGAATACCCGCCACGTGCGCGGCTCGGATCTTCCAGCTGACCCGGGAGCTGGGGCACAAGTCCGACGGCGAAACGGTGCGGTGGCTCCTCGAACACGCCGAGCAGGCCATAATCGAAGCCACCGGCACCGGCACCGTCCCGGCCATCGCCGTCTCCGTCGGTGGGACCCTCAAGATCCCCACCACGCCCAGCTACCACAACCCGACCGACGACTCGCAGACCTCCGCGGCCAAGAAGCGGAAGCGCCCCTCCAACAGCGAGTTCGTGGACCTAAGCGACGCCGTATCGCAGTCCTCGGGGCTCGCTCCGGTGGGGCCCTCGACTCCCCAGCCCGTCCCTCAAGGCCTGGTCCCCGTCTGGGCCGTGGGCAACGCCGGCGTGATGGTCCCTGCCAACGCCTTCTGGATGATTCCACCGAACGGGTCGGGACAGGTCGTCCCCGCCGCCGGCCCGTCCAGCCAAGCACCGCAAATTTGGGCCTTGTCCCCGACTATGACGCCGGTGTTCAACGTGGCCGCGGCCCGGCCCATATCGACGAGTACGTTCGTGGCGAACGGCGGAGTGGAGGTTCGCGCTCCGTCGCCGGCGCTGTCGAACTCGGCGGTGAGCACGAGCACGGTGGGGTCGAAGGCGGCGAAGAAGTCGTCGTCGACAATGGCGCCGAGCGTGAGCTCGAGTGGTAGTGGTAACAGTAACAACGGTAGTGGCACGAAAGCTCAGATGCTTAGGGATTTTACTCTAGAGATTTACGACAAGCAGGAGCTGCAGTTCATGGGTCGACCCGCAGGCCCAGGAAGCCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0030544 GO:0031072 GO:0031974 GO:0031981 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044421 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045171 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ

Protein Analysis

394

Amino Acids

41.11

Weight (kDa)

6.4

Isoelectric Point (pI)

60.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCP	PF03634	112 - 200	2.1e-25	TCP family transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011415)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22080 AT5G22080
fragaria_vesca	FvH4_5g27361
malus_domestica	MD03G1156500.v1.1 MD11G1174000.v1.1
prunus_persica	Prupe.6G145600_v2.0.a1
pyrus_communis	pycom11g14850
rosa_chinensis	RchiOBHm_Chr7g0218521
rosa_laevigata	RLG00000002363
rosa_multiflora	Rmu_sc0001301.1_g000039
rosa_roxburghii	Rroxscaffold_3G00240870
rosa_rugosa	Rorug07G0177800 Rorug07G0177900 Rorug07G0178000 Rorug07G0178100
rosa_samantha	Rh7AG319300 Rh7BG311100 Rh7CG336100 Rh7DG318400
rosa_wichuraiana	Rw7G027200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	8
AccB1I	GGYRCC	4 cut(s)	71, 506, 512, 1039
AccI	GTMKAC	2 cut(s)	1031, 1159
AccII	CGCG	6 cut(s)	323, 369, 401, 608, 899, 954
AclWI	GGATC	5 cut(s)	27, 373, 386, 416, 550
AcoI	YGGCCR	4 cut(s)	370, 522, 609, 894
AcsI	RAATTY	1 cut(s)	852
AcuI	CTGAAG	1 cut(s)	188
AcvI	CACGTG	1 cut(s)	396
AcyI	GRCGYC	4 cut(s)	5, 660, 878, 1040
AfaI	GTAC	1 cut(s)	922
AgsI	TTSAA	1 cut(s)	889
AhdI	GACNNNNNGTC	2 cut(s)	196, 815
AjnI	CCWGG	2 cut(s)	726, 1171
AjuI	GAANNNNNNNTTGG	2 cut(s)	626, 658
AloI	GAACNNNNNNTCC	4 cut(s)	933, 965, 1133, 1165
AluBI	AGCT	7 cut(s)	136, 418, 430, 573, 1053, 1097, 1144
AluI	AGCT	7 cut(s)	136, 418, 430, 573, 1053, 1097, 1144
Alw21I	GWGCWC	3 cut(s)	992, 998, 1055
Alw26I	GTCTC	1 cut(s)	538
AlwI	GGATC	5 cut(s)	27, 373, 386, 416, 550
AlwNI	CAGNNNCTG	1 cut(s)	1144
Ama87I	CYCGRG	3 cut(s)	423, 676, 1054
ApaI	GGGCCC	2 cut(s)	220, 699
ApeKI	GCWGC	2 cut(s)	133, 1144
ApoI	RAATTY	1 cut(s)	852
ArsI	GACNNNNNNTTYG	2 cut(s)	1010, 1042
AspLEI	GCGC	6 cut(s)	330, 401, 627, 956, 970, 1042
AsuC2I	CCSGG	6 cut(s)	83, 215, 424, 425, 521, 904
AsuHPI	GGTGA	1 cut(s)	997
AvaI	CYCGRG	3 cut(s)	423, 676, 1054
AvaII	GGWCC	6 cut(s)	256, 343, 546, 649, 730, 766
BaeGI	GKGCMC	3 cut(s)	220, 438, 699
BamHI	GGATCC	1 cut(s)	378
BanI	GGYRCC	4 cut(s)	71, 506, 512, 1039
BanII	GRGCYC	5 cut(s)	180, 220, 684, 699, 1055
BauI	CACGAG	1 cut(s)	991
BbrPI	CACGTG	1 cut(s)	396
BbsI	GAAGAC	1 cut(s)	33
Bbv12I	GWGCWC	3 cut(s)	992, 998, 1055
BbvI	GCAGC	2 cut(s)	145, 1131
BccI	CCATC	3 cut(s)	166, 533, 757
BceAI	ACGGC	6 cut(s)	171, 463, 515, 647, 728, 952
BcgI	CGANNNNNNTGC	2 cut(s)	259, 293
BciT130I	CCWGG	2 cut(s)	728, 1173
BcnI	CCSGG	6 cut(s)	83, 215, 424, 425, 521, 904
BcoDI	GTCTC	1 cut(s)	538
BfaI	CTAG	1 cut(s)	1121
BfmI	CTRYAG	1 cut(s)	1145
BfoI	RGCGCY	4 cut(s)	331, 628, 971, 1043
BglI	GCCNNNNNGGC	1 cut(s)	485
Bme1390I	CCNGG	8 cut(s)	83, 215, 424, 425, 521, 728, 904, 1173
Bme18I	GGWCC	6 cut(s)	256, 343, 546, 649, 730, 766
BmeRI	GACNNNNNGTC	2 cut(s)	196, 815
BmeT110I	CYCGRG	3 cut(s)	423, 676, 1054
BmrFI	CCNGG	8 cut(s)	83, 215, 424, 425, 521, 728, 904, 1173
BmsI	GCATC	4 cut(s)	150, 261, 267, 1092
BpiI	GAAGAC	1 cut(s)	33
Bpu10I	CCTNAGC	2 cut(s)	653, 1106
BpuEI	CTTGAG	2 cut(s)	536, 705
BpuMI	CCSGG	6 cut(s)	83, 215, 424, 425, 521, 904
BsaAI	YACGTR	1 cut(s)	396
BsaHI	GRCGYC	4 cut(s)	5, 660, 878, 1040
BsaJI	CCNNGG	9 cut(s)	261, 339, 367, 423, 606, 675, 744, 897, 1171
BsaWI	WCCGGW	2 cut(s)	93, 688
BsaXI	ACNNNNNCTCC	4 cut(s)	933, 963, 1133, 1163
Bse118I	RCCGGY	9 cut(s)	68, 74, 292, 503, 509, 755, 827, 880, 964
Bse1I	ACTGG	1 cut(s)	1180
BseBI	CCWGG	2 cut(s)	728, 1173
BseDI	CCNNGG	9 cut(s)	261, 339, 367, 423, 606, 675, 744, 897, 1171
BseGI	GGATG	1 cut(s)	792
BseMII	CTCAG	1 cut(s)	1112
BseNI	ACTGG	1 cut(s)	1180
BseRI	GAGGAG	6 cut(s)	51, 54, 292, 295, 322, 458
BseSI	GKGCMC	3 cut(s)	220, 438, 699
BseX3I	CGGCCG	1 cut(s)	370
BseXI	GCAGC	2 cut(s)	145, 1131
BseYI	CCCAGC	3 cut(s)	430, 569, 708
Bsh1236I	CGCG	6 cut(s)	323, 369, 401, 608, 899, 954
Bsh1285I	CGRYCG	2 cut(s)	373, 588
BshNI	GGYRCC	4 cut(s)	71, 506, 512, 1039
BsiEI	CGRYCG	2 cut(s)	373, 588
BsiHKAI	GWGCWC	3 cut(s)	992, 998, 1055
BsiHKCI	CYCGRG	3 cut(s)	423, 676, 1054
BslFI	GGGAC	9 cut(s)	242, 503, 559, 701, 716, 752, 803, 822, 850
BsmAI	GTCTC	1 cut(s)	538
BsmBI	CGTCTC	1 cut(s)	538
BsmFI	GGGAC	9 cut(s)	242, 503, 559, 701, 716, 752, 803, 822, 850
BsoBI	CYCGRG	3 cut(s)	423, 676, 1054
Bsp120I	GGGCCC	2 cut(s)	216, 695
Bsp1286I	GDGCHC	8 cut(s)	180, 220, 438, 684, 699, 992, 998, 1055
Bsp143I	GATC	5 cut(s)	19, 52, 378, 408, 555
Bsp19I	CCATGG	1 cut(s)	261
BspCNI	CTCAG	1 cut(s)	1111
BspFNI	CGCG	6 cut(s)	323, 369, 401, 608, 899, 954
BspMAI	CTGCAG	1 cut(s)	1149
BspPI	GGATC	5 cut(s)	27, 373, 386, 416, 550
BspT107I	GGYRCC	4 cut(s)	71, 506, 512, 1039
BsrFI	RCCGGY	9 cut(s)	68, 74, 292, 503, 509, 755, 827, 880, 964
BsrI	ACTGG	1 cut(s)	1180
BssAI	RCCGGY	9 cut(s)	68, 74, 292, 503, 509, 755, 827, 880, 964
BssECI	CCNNGG	9 cut(s)	261, 339, 367, 423, 606, 675, 744, 897, 1171
BssMI	GATC	5 cut(s)	19, 52, 378, 408, 555
BssNI	GRCGYC	4 cut(s)	5, 660, 878, 1040
BssSI	CACGAG	1 cut(s)	991
BssT1I	CCWWGG	2 cut(s)	261, 339
Bst2BI	CACGAG	1 cut(s)	991
Bst2UI	CCWGG	2 cut(s)	728, 1173
Bst4CI	ACNGT	7 cut(s)	101, 198, 457, 517, 1000, 1073, 1082
BstACI	GRCGYC	4 cut(s)	5, 660, 878, 1040
BstAPI	GCANNNNNTGC	1 cut(s)	1144
BstBAI	YACGTR	1 cut(s)	396
BstC8I	GCNNGC	7 cut(s)	237, 486, 684, 757, 829, 966, 1168
BstDEI	CTNAG	3 cut(s)	653, 1098, 1106
BstDSI	CCRYGG	5 cut(s)	261, 367, 606, 744, 897
BstF5I	GGATG	1 cut(s)	792
BstFNI	CGCG	6 cut(s)	323, 369, 401, 608, 899, 954
BstH2I	RGCGCY	4 cut(s)	331, 628, 971, 1043
BstHHI	GCGC	6 cut(s)	330, 401, 627, 956, 970, 1042
BstKTI	GATC	5 cut(s)	22, 55, 381, 411, 558
BstMAI	GTCTC	1 cut(s)	538
BstMBI	GATC	5 cut(s)	19, 52, 378, 408, 555
BstMCI	CGRYCG	2 cut(s)	373, 588
BstNI	CCWGG	2 cut(s)	728, 1173
BstSCI	CCNGG	8 cut(s)	81, 213, 422, 423, 519, 726, 902, 1171
BstSFI	CTRYAG	1 cut(s)	1145
BstSLI	GKGCMC	3 cut(s)	220, 438, 699
BstUI	CGCG	6 cut(s)	323, 369, 401, 608, 899, 954
BstV1I	GCAGC	2 cut(s)	145, 1131
BstV2I	GAAGAC	1 cut(s)	33
BstX2I	RGATCY	3 cut(s)	378, 408, 555
BstYI	RGATCY	3 cut(s)	378, 408, 555
BstZI	CGGCCG	1 cut(s)	370
BtgI	CCRYGG	5 cut(s)	261, 367, 606, 744, 897
BtgZI	GCGATG	3 cut(s)	173, 284, 511
BtsCI	GGATG	1 cut(s)	792
BtsIMutI	CAGTG	1 cut(s)	106
Cac8I	GCNNGC	7 cut(s)	237, 486, 684, 757, 829, 966, 1168
CaiI	CAGNNNCTG	1 cut(s)	1144
CciNI	GCGGCCGC	1 cut(s)	370
CfoI	GCGC	6 cut(s)	330, 401, 627, 956, 970, 1042
Cfr10I	RCCGGY	9 cut(s)	68, 74, 292, 503, 509, 755, 827, 880, 964
Cfr42I	CCGCGG	3 cut(s)	370, 609, 900
Cfr9I	CCCGGG	1 cut(s)	423
CseI	GACGC	2 cut(s)	668, 886
Csp6I	GTAC	1 cut(s)	921
CspCI	CAANNNNNGTGG	2 cut(s)	1066, 1101
CviAII	CATG	2 cut(s)	262, 1153
CviQI	GTAC	1 cut(s)	921
DdeI	CTNAG	3 cut(s)	653, 1098, 1106
DinI	GGCGCC	1 cut(s)	1041
DpnI	GATC	5 cut(s)	21, 54, 380, 410, 557
DpnII	GATC	5 cut(s)	19, 52, 378, 408, 555
DriI	GACNNNNNGTC	2 cut(s)	196, 815
EaeI	YGGCCR	4 cut(s)	370, 522, 609, 894
EagI	CGGCCG	1 cut(s)	370
Eam1105I	GACNNNNNGTC	2 cut(s)	196, 815
EciI	GGCGGA	2 cut(s)	298, 954
Ecl136II	GAGCTC	1 cut(s)	1053
EclXI	CGGCCG	1 cut(s)	370
Eco130I	CCWWGG	2 cut(s)	261, 339
Eco147I	AGGCCT	1 cut(s)	726
Eco24I	GRGCYC	5 cut(s)	180, 220, 684, 699, 1055
Eco47I	GGWCC	6 cut(s)	256, 343, 546, 649, 730, 766
Eco52I	CGGCCG	1 cut(s)	370
Eco53kI	GAGCTC	1 cut(s)	1053
Eco57I	CTGAAG	1 cut(s)	188
Eco72I	CACGTG	1 cut(s)	396
Eco88I	CYCGRG	3 cut(s)	423, 676, 1054
EcoICRI	GAGCTC	1 cut(s)	1053
EcoO109I	RGGNCCY	3 cut(s)	546, 695, 696
EcoRII	CCWGG	2 cut(s)	726, 1171
EcoT14I	CCWWGG	2 cut(s)	261, 339
EcoT38I	GRGCYC	5 cut(s)	180, 220, 684, 699, 1055
EgeI	GGCGCC	1 cut(s)	1041
EheI	GGCGCC	1 cut(s)	1041
ErhI	CCWWGG	2 cut(s)	261, 339
Esp3I	CGTCTC	1 cut(s)	538
FaeI	CATG	2 cut(s)	265, 1156
FaiI	YATR	5 cut(s)	263, 491, 875, 911, 1154
FaqI	GGGAC	9 cut(s)	242, 503, 559, 701, 716, 752, 803, 822, 850
FatI	CATG	2 cut(s)	261, 1152
FauI	CCCGC	4 cut(s)	231, 397, 829, 1171
FblI	GTMKAC	2 cut(s)	1031, 1159
FokI	GGATG	1 cut(s)	799
FriOI	GRGCYC	5 cut(s)	180, 220, 684, 699, 1055
FspBI	CTAG	1 cut(s)	1121
GlaI	GCGC	6 cut(s)	329, 400, 626, 955, 969, 1041
GsaI	CCCAGC	3 cut(s)	434, 573, 712
HaeII	RGCGCY	4 cut(s)	331, 628, 971, 1043
HgaI	GACGC	2 cut(s)	668, 886
HhaI	GCGC	6 cut(s)	330, 401, 627, 956, 970, 1042
Hin1I	GRCGYC	4 cut(s)	5, 660, 878, 1040
Hin1II	CATG	2 cut(s)	265, 1156
Hin6I	GCGC	6 cut(s)	328, 399, 625, 954, 968, 1040
HinP1I	GCGC	6 cut(s)	328, 399, 625, 954, 968, 1040
HincII	GTYRAC	2 cut(s)	1032, 1160
HindII	GTYRAC	2 cut(s)	1032, 1160
HinfI	GANTC	6 cut(s)	120, 185, 203, 593, 703, 790
HphI	GGTGA	1 cut(s)	997
Hpy166II	GTNNAC	3 cut(s)	649, 1032, 1160
Hpy188I	TCNGA	9 cut(s)	52, 190, 202, 208, 251, 383, 408, 445, 1101
Hpy188III	TCNNGA	5 cut(s)	23, 553, 784, 807, 1121
Hpy8I	GTNNAC	3 cut(s)	649, 1032, 1160
HpyAV	CCTTC	3 cut(s)	349, 790, 1003
HpyCH4III	ACNGT	7 cut(s)	101, 198, 457, 517, 1000, 1073, 1082
HpyCH4IV	ACGT	4 cut(s)	5, 395, 891, 923
HpyCH4V	TGCA	3 cut(s)	274, 280, 1147
HpyF3I	CTNAG	3 cut(s)	653, 1098, 1106
HpySE526I	ACGT	4 cut(s)	5, 395, 891, 923
Hsp92I	GRCGYC	4 cut(s)	5, 660, 878, 1040
Hsp92II	CATG	2 cut(s)	265, 1156
HspAI	GCGC	6 cut(s)	328, 399, 625, 954, 968, 1040
KasI	GGCGCC	1 cut(s)	1039
KflI	GGGWCCC	1 cut(s)	546
KroI	GCCGGC	3 cut(s)	755, 827, 964
KroNI	GCCGGC	3 cut(s)	757, 829, 966
KspI	CCGCGG	3 cut(s)	370, 609, 900
Kzo9I	GATC	5 cut(s)	19, 52, 378, 408, 555
LmnI	GCTCC	8 cut(s)	175, 244, 335, 427, 471, 691, 961, 1141
Lsp1109I	GCAGC	2 cut(s)	145, 1131
LweI	GCATC	4 cut(s)	150, 261, 267, 1092
MaeI	CTAG	1 cut(s)	1121
MaeII	ACGT	4 cut(s)	5, 395, 891, 923
MaeIII	GTNAC	2 cut(s)	1067, 1073
MalI	GATC	5 cut(s)	21, 54, 380, 410, 557
MboI	GATC	5 cut(s)	19, 52, 378, 408, 555
MboII	GAAGA	4 cut(s)	38, 181, 403, 1030
MflI	RGATCY	3 cut(s)	378, 408, 555
MhlI	GDGCHC	8 cut(s)	180, 220, 438, 684, 699, 992, 998, 1055
MluCI	AATT	2 cut(s)	142, 852
Mly113I	GGCGCC	1 cut(s)	1040
MlyI	GAGTC	5 cut(s)	129, 179, 197, 587, 697
MmeI	TCCRAC	4 cut(s)	180, 229, 468, 657
MreI	CGCCGGCG	2 cut(s)	755, 964
MroNI	GCCGGC	3 cut(s)	755, 827, 964
MseI	TTAA	1 cut(s)	141
MspA1I	CMGCKG	6 cut(s)	136, 166, 369, 418, 608, 899
MspR9I	CCNGG	8 cut(s)	83, 215, 424, 425, 521, 728, 904, 1173
MvaI	CCWGG	2 cut(s)	728, 1173
MvnI	CGCG	6 cut(s)	323, 369, 401, 608, 899, 954
NaeI	GCCGGC	3 cut(s)	757, 829, 966
NarI	GGCGCC	1 cut(s)	1040
NciI	CCSGG	6 cut(s)	83, 215, 424, 425, 521, 904
NcoI	CCATGG	1 cut(s)	261
NdeII	GATC	5 cut(s)	19, 52, 378, 408, 555
NgoMIV	GCCGGC	3 cut(s)	755, 827, 964
NlaIII	CATG	2 cut(s)	265, 1156
NmeAIII	GCCGAG	3 cut(s)	505, 959, 1068
NotI	GCGGCCGC	1 cut(s)	370
PaeR7I	CTCGAG	1 cut(s)	1054
PceI	AGGCCT	1 cut(s)	726
PcsI	WCGNNNNNNNCGW	6 cut(s)	477, 534, 920, 929, 1004, 1013
PdiI	GCCGGC	3 cut(s)	757, 829, 966
PfeI	GAWTC	1 cut(s)	790
PleI	GAGTC	5 cut(s)	128, 179, 197, 587, 697
PluTI	GGCGCC	1 cut(s)	1043
PmaCI	CACGTG	1 cut(s)	396
PmlI	CACGTG	1 cut(s)	396
PpsI	GAGTC	5 cut(s)	128, 179, 197, 587, 697
Ppu21I	YACGTR	1 cut(s)	396
PpuMI	RGGWCCY	1 cut(s)	546
Psp124BI	GAGCTC	1 cut(s)	1055
Psp5II	RGGWCCY	1 cut(s)	546
Psp6I	CCWGG	2 cut(s)	726, 1171
PspCI	CACGTG	1 cut(s)	396
PspFI	CCCAGC	3 cut(s)	430, 569, 708
PspGI	CCWGG	2 cut(s)	726, 1171
PspOMI	GGGCCC	2 cut(s)	216, 695
PspPPI	RGGWCCY	1 cut(s)	546
PspXI	VCTCGAGB	1 cut(s)	1054
PstI	CTGCAG	1 cut(s)	1149
PstNI	CAGNNNCTG	1 cut(s)	1144
PsuI	RGATCY	3 cut(s)	378, 408, 555
PvuII	CAGCTG	2 cut(s)	136, 418
RsaI	GTAC	1 cut(s)	922
RsaNI	GTAC	1 cut(s)	921
SacI	GAGCTC	1 cut(s)	1055
SacII	CCGCGG	3 cut(s)	370, 609, 900
SalI	GTCGAC	2 cut(s)	1030, 1158
SaqAI	TTAA	1 cut(s)	141
Sau3AI	GATC	5 cut(s)	19, 52, 378, 408, 555
SchI	GAGTC	5 cut(s)	129, 179, 197, 587, 697
ScrFI	CCNGG	8 cut(s)	83, 215, 424, 425, 521, 728, 904, 1173
SduI	GDGCHC	8 cut(s)	180, 220, 438, 684, 699, 992, 998, 1055
SfaNI	GCATC	4 cut(s)	150, 261, 267, 1092
SfcI	CTRYAG	1 cut(s)	1145
SfoI	GGCGCC	1 cut(s)	1041
Sfr274I	CTCGAG	1 cut(s)	1054
Sfr303I	CCGCGG	3 cut(s)	370, 609, 900
SgrAI	CRCCGGYG	4 cut(s)	74, 755, 880, 964
SgrBI	CCGCGG	3 cut(s)	370, 609, 900
SinI	GGWCC	6 cut(s)	256, 343, 546, 649, 730, 766
SlaI	CTCGAG	1 cut(s)	1054
SmaI	CCCGGG	1 cut(s)	425
SmlI	CTYRAG	3 cut(s)	551, 720, 1054
SmoI	CTYRAG	3 cut(s)	551, 720, 1054
Sse9I	AATT	2 cut(s)	142, 852
SseBI	AGGCCT	1 cut(s)	726
SspDI	GGCGCC	1 cut(s)	1039
SspMI	CTAG	1 cut(s)	1121
SstI	GAGCTC	1 cut(s)	1055
StuI	AGGCCT	1 cut(s)	726
StyD4I	CCNGG	8 cut(s)	81, 213, 422, 423, 519, 726, 902, 1171
StyI	CCWWGG	2 cut(s)	261, 339
TaaI	ACNGT	7 cut(s)	101, 198, 457, 517, 1000, 1073, 1082
TaiI	ACGT	4 cut(s)	8, 398, 894, 926
TaqII	GACCGA	1 cut(s)	602
TasI	AATT	2 cut(s)	142, 852
TfiI	GAWTC	1 cut(s)	790
Tru1I	TTAA	1 cut(s)	141
Tru9I	TTAA	1 cut(s)	141
TscAI	CASTG	1 cut(s)	106
TseI	GCWGC	2 cut(s)	133, 1144
TspDTI	ATGAA	1 cut(s)	1141
TspGWI	ACGGA	5 cut(s)	48, 231, 235, 526, 948
TspMI	CCCGGG	1 cut(s)	423
TspRI	CASTG	1 cut(s)	106
VpaK11BI	GGWCC	6 cut(s)	256, 343, 546, 649, 730, 766
XapI	RAATTY	1 cut(s)	852
XbaI	TCTAGA	1 cut(s)	1120
XhoI	CTCGAG	1 cut(s)	1054
XmaI	CCCGGG	1 cut(s)	423
XmiI	GTMKAC	2 cut(s)	1031, 1159
XspI	CTAG	1 cut(s)	1121
ZraI	GACGTC	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.