Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0008740

Physical Location & Seq

Genomic Coordinates Reverse (-)

15128026 .. 15130341

Gene Structure 2316 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0180900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2316 bp

ATGGAGAACAAAAAGTTTGTAGCCCTGCAGATCATATATCTTCTTGGCTTGAGTCTCATATTTTGCCTATCACTAGCTATTACCGATGGAGGCATGGGAATACTAAACCCGAAAGCTGAATCCGAGGCAGAAGAGGAAAATAGTGGCATGCAAACTTACATTGTTTGGGTGAAAAAGCCGGTGAGGAGGCTATTTTCAGAATCTCATCATGAACATTTAGAGAGTTGGTACAAGTCATTTTTGCCCAAAAGTTTTGCAAACTCAAAGGAGGCGATGGACCAGCGAATGGTTTACGCATACCACCATGTGGCTACTGGCTTTGCAGCAAAGCTTACAGCGGAGGAAGTAAAAGAAATGGAGACCAAGGATGGTTTTATATCAGCTCATCAAGATAGGATTCTCCCTCTGCACACTACCCACAGTCCGAACTTCTTGGGGTTGTACCAAGATTTGGGACTTTGGAAAGGGTCTAATTATGGTGAAGGAATCATTATTGGAGTTTTGGATACTGGAATAACACCAGGTCATCCCTCATTCAGCGATGAAGGAGTGGGACCTCCTCCGGCTAAATGGAAAGGCAAGTGTGATTTCAATGGCACATTCTGCAACAACAAGCTTATTGGTGCCAGAAGTTTCCAGGGTGGTAAAACTACCGGAGCTCCACCAGTTGACCTTGAAGGCCATGGAACCCACACGTCGAGCACAGCTGGAGGAAATTTTGTGAAAGGCGCCAACGTGTTTGGAATGGCAAAGGGAACAGCCTCTGGCATGGCACCTTATGCTCACTTGGCAATGTACCAAGTTTGTTCTGAACAGGGTTGTTCTGAAAGTGACATTGTAGCTGCTATGGACACTGCTGTTGCCGATGGAGTGGACGTGCTCTCCCTCTCACTTGGCGGTGGCTCAGCTCCTTTCTATGCAGACGGAATCGCAGTCGGTGCATTTGGAGCAATTCAGAAGGGAATTTTTGTTAGCTGCTCAGCTGGAAATGAGGGTCCTGTATATGGTTCTTTATCCAATGAAGCGCCATGGATTCTAACCGTCGGAGCAAGCACCATTGACAGAAGCATAAAGGCAACAGCAAAACTTGGAAATGGGCAGGAATATGATGGGGAATCGTTATTCCAGGATCAAAATTTTAGTTCAAATTTGTTACCTCTTGTTTATGCCGGTGCATATAGCAATGATTCAACAGCTCTGTGCGATGTAGGAACCCTTAATGGAGTTGAAGGGAAAGTGGTGCTGTGTGAAAGAGGTGGAGGAATTGGAAGAATTGCCAAAGGAGAAGAAGTCAAAAGAGCAGGTGGTGCTGCCATGATCCTCATGAACGAAGACATTGATGGCTATAGCACCTTAGCTGATGCTCATGTGCTTCCTGCAACACATGTGAGTTATGCTGCAGGTTTGAGCATCAAAGCCTACATAAACTCCACCTCAACACCTATGGCCACAATCTTGTTCAAAGGCACTGTCATCGGTGATCAAAATGCTCCCGCAGTCACTTCCTTTTCATCAAGAGGACCAAGCCTAGCGAGCACAGGAATTTTGAAACCTGACATCATTGGTCCCGGTGTTAGCATCATAGCTGCATGGCCTGTTTCGGTGGACAATGGCACAGAATCTACGGCAACATTTAACATGGTTTCAGGTACTTCAATGTCATGCCCTCACCTGAGTGGCATTGCAGCTTTGCTCAAGAGCTCACACCCCGACTGGTCACCGGCTGCCATCAAGTCTGCAATTGTGACAACCGCTGACATAGTAAACCTCGGAGGCAAACCTATTATTGATGAAACACTTGCTCCAGCAGACATCTTTGCCACTGGTGCAGGACATGTTAATCCTCCAAAAGCAGATGACCCCGGGCTAATCTATGACACAAAACCAGTGGATTACATTCCCTACCTGTGCGGTTTGAACTACACAGACGATCAGATACAGATAATCACCCAACAAACAGTGAAGTGCTCTGAAGTAGGAGTCATACCAGAAGCGCAGCTAAATTATCCTTCATTTTCTATTATATTCCAGGACTTGTCTCAGTCTCAAGATTACACAAGGACGGTGACAAATGTTGGACCAGCTAATTCAACTTACAACTTGGATCTTAAGTTACCAGGTAAAATCGGCATGAGTGTGAGTCCTTCGCAGCTTAAGTTTACAGAAGTTGGCCAGACAATTACATACCGAGCAGAGTTTCTCCCGGAAGATGGGGCAGGGAAGGATGCACCATTTTCTCAGGGATATTTGAGATGGTTCTCTGATCAGCATTCTGTTACTAGCCCCATATCTGTGATCTTCGACACCCAGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

mTERF

Protein Analysis

771

Amino Acids

81.48

Weight (kDa)

5.09

Isoelectric Point (pI)

30.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	52 - 137	1.5e-10	Peptidase inhibitor I9
Peptidase_S8	PF00082	160 - 585	1.2e-46	Subtilase family
PA	PF02225	386 - 471	4.1e-13	PA domain
fn3_6	PF17766	666 - 765	1.4e-24	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008740)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G09620 AT4G09620 AT4G09620
fragaria_vesca	FvH4_5g27630
malus_domestica	MD05G1041300.v1.1
prunus_persica	Prupe.8G057100_v2.0.a1 Prupe.8G057100_v2.0.a1 Prupe.8G057100_v2.0.a1 Prupe.8G057100_v2.0.a1 Prupe.8G057100_v2.0.a1 Prupe.8G057100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0219041
rosa_laevigata	RLG00000002307
rosa_multiflora	Rmu_sc0011122.1_g000002 Rmu_sc0042351.1_g000001
rosa_roxburghii	Rroxscaffold_3G00240220
rosa_rugosa	Rorug07G0180900 Rorug07G0181000
rosa_samantha	Rh7AG324100 Rh7BG315600 Rh7CG341100 Rh7DG321100
rosa_wichuraiana	Rw7G027450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1292
Acc36I	ACCTGC	2 cut(s)	1292, 1391
AccB1I	GGYRCC	3 cut(s)	623, 728, 772
AccB7I	CCANNNNNTGG	3 cut(s)	286, 307, 451
AciI	CCGC	5 cut(s)	338, 897, 1494, 1752, 1911
AclWI	GGATC	3 cut(s)	1137, 1312, 2112
AcoI	YGGCCR	2 cut(s)	1446, 2170
AcsI	RAATTY	5 cut(s)	715, 963, 1135, 1147, 1542
AcuI	CTGAAG	1 cut(s)	1992
AcyI	GRCGYC	1 cut(s)	729
AdeI	CACNNNGTG	1 cut(s)	307
AfaI	GTAC	4 cut(s)	230, 443, 797, 1651
AfiI	CCNNNNNNNGG	5 cut(s)	286, 307, 451, 1004, 2210
AflII	CTTAAG	2 cut(s)	2108, 2153
AflIII	ACRYGT	4 cut(s)	693, 735, 1384, 1834
AjiI	CACGTC	2 cut(s)	696, 877
AjnI	CCWGG	5 cut(s)	520, 636, 1125, 2028, 2116
AleI	CACNNNNGTG	1 cut(s)	1674
Alw21I	GWGCWC	6 cut(s)	661, 704, 882, 1538, 1703, 1970
Alw26I	GTCTC	4 cut(s)	59, 353, 2043, 2049
AlwI	GGATC	3 cut(s)	1137, 1312, 2112
AlwNI	CAGNNNCTG	1 cut(s)	764
Ama87I	CYCGRG	1 cut(s)	1862
AoxI	GGCC	4 cut(s)	679, 1446, 1592, 2170
ApoI	RAATTY	5 cut(s)	715, 963, 1135, 1147, 1542
ArsI	GACNNNNNNTTYG	2 cut(s)	1455, 1487
AspLEI	GCGC	3 cut(s)	731, 1027, 1996
AspS9I	GGNCC	6 cut(s)	277, 554, 995, 1520, 1565, 2078
AsuC2I	CCSGG	4 cut(s)	1569, 1863, 1864, 2204
AsuHPI	GGTGA	8 cut(s)	181, 193, 491, 1490, 1661, 1710, 1939, 2077
AvaI	CYCGRG	1 cut(s)	1862
AvaII	GGWCC	6 cut(s)	277, 554, 995, 1520, 1565, 2078
BalI	TGGCCA	2 cut(s)	1448, 2172
BanI	GGYRCC	3 cut(s)	623, 728, 772
BanII	GRGCYC	2 cut(s)	661, 1703
BbsI	GAAGAC	1 cut(s)	1338
Bbv12I	GWGCWC	6 cut(s)	661, 704, 882, 1538, 1703, 1970
BccI	CCATC	9 cut(s)	80, 268, 362, 860, 1103, 1334, 1736, 2204, 2247
BceAI	ACGGC	1 cut(s)	1641
BcgI	CGANNNNNNTGC	2 cut(s)	1456, 1490
BciT130I	CCWGG	5 cut(s)	522, 638, 1127, 2030, 2118
BciVI	GTATCC	1 cut(s)	499
BclI	TGATCA	2 cut(s)	1480, 2263
BcnI	CCSGG	4 cut(s)	1569, 1863, 1864, 2204
BcoDI	GTCTC	4 cut(s)	59, 353, 2043, 2049
BfaI	CTAG	3 cut(s)	74, 1529, 2280
BfmI	CTRYAG	3 cut(s)	26, 1345, 1398
BfoI	RGCGCY	2 cut(s)	732, 1028
BfrI	CTTAAG	2 cut(s)	2108, 2153
BfuAI	ACCTGC	2 cut(s)	1292, 1391
BfuI	GTATCC	1 cut(s)	499
BlpI	GCTNAGC	2 cut(s)	904, 979
Bme1390I	CCNGG	9 cut(s)	522, 638, 1127, 1569, 1863, 1864, 2030, 2118, 2204
Bme18I	GGWCC	6 cut(s)	277, 554, 995, 1520, 1565, 2078
BmeT110I	CYCGRG	1 cut(s)	1862
BmgBI	CACGTC	2 cut(s)	696, 877
BmgT120I	GGNCC	6 cut(s)	277, 554, 995, 1520, 1565, 2078
BmiI	GGNNCC	8 cut(s)	555, 625, 688, 730, 774, 996, 1213, 1567
BmrFI	CCNGG	9 cut(s)	522, 638, 1127, 1569, 1863, 1864, 2030, 2118, 2204
BmsI	GCATC	4 cut(s)	1351, 1419, 1587, 2215
BpiI	GAAGAC	1 cut(s)	1338
BpmI	CTGGAG	2 cut(s)	729, 1788
Bpu10I	CCTNAGC	1 cut(s)	1354
Bpu1102I	GCTNAGC	2 cut(s)	904, 979
BpuEI	CTTGAG	3 cut(s)	70, 1679, 2031
BpuMI	CCSGG	4 cut(s)	1569, 1863, 1864, 2204
BsaHI	GRCGYC	1 cut(s)	729
BsaI	GGTCTC	1 cut(s)	353
BsaJI	CCNNGG	8 cut(s)	123, 363, 637, 682, 1028, 1768, 1861, 1862
BsaWI	WCCGGW	1 cut(s)	653
Bsc4I	CCNNNNNNNGG	5 cut(s)	286, 307, 451, 1004, 2210
Bse118I	RCCGGY	3 cut(s)	178, 1169, 1720
Bse1I	ACTGG	6 cut(s)	319, 514, 665, 1718, 1828, 1886
Bse3DI	GCAATG	3 cut(s)	798, 1189, 1680
BseBI	CCWGG	5 cut(s)	522, 638, 1127, 2030, 2118
BseDI	CCNNGG	8 cut(s)	123, 363, 637, 682, 1028, 1768, 1861, 1862
BseGI	GGATG	3 cut(s)	373, 526, 2230
BseLI	CCNNNNNNNGG	5 cut(s)	286, 307, 451, 1004, 2210
BseMI	GCAATG	3 cut(s)	798, 1189, 1680
BseMII	CTCAG	5 cut(s)	918, 993, 1664, 2054, 2252
BseNI	ACTGG	6 cut(s)	319, 514, 665, 1718, 1828, 1886
BseRI	GAGGAG	2 cut(s)	199, 549
BseYI	CCCAGC	1 cut(s)	2307
BsgI	GTGCAG	2 cut(s)	392, 1848
BshFI	GGCC	4 cut(s)	681, 1448, 1594, 2172
BshNI	GGYRCC	3 cut(s)	623, 728, 772
BsiHKAI	GWGCWC	6 cut(s)	661, 704, 882, 1538, 1703, 1970
BsiHKCI	CYCGRG	1 cut(s)	1862
BsiSI	CCGG	8 cut(s)	179, 563, 654, 1170, 1569, 1721, 1863, 2204
BslFI	GGGAC	3 cut(s)	468, 567, 1551
BslI	CCNNNNNNNGG	5 cut(s)	286, 307, 451, 1004, 2210
BsmAI	GTCTC	4 cut(s)	59, 353, 2043, 2049
BsmFI	GGGAC	3 cut(s)	468, 567, 1551
BsmI	GAATGC	1 cut(s)	2269
BsnI	GGCC	4 cut(s)	681, 1448, 1594, 2172
Bso31I	GGTCTC	1 cut(s)	353
BsoBI	CYCGRG	1 cut(s)	1862
Bsp1286I	GDGCHC	6 cut(s)	661, 704, 882, 1538, 1703, 1970
Bsp143I	GATC	8 cut(s)	30, 1129, 1317, 1480, 1930, 2104, 2263, 2295
Bsp1720I	GCTNAGC	2 cut(s)	904, 979
Bsp19I	CCATGG	2 cut(s)	682, 1028
BspACI	CCGC	5 cut(s)	338, 897, 1494, 1752, 1911
BspANI	GGCC	4 cut(s)	681, 1448, 1594, 2172
BspCNI	CTCAG	5 cut(s)	917, 992, 1665, 2053, 2251
BspHI	TCATGA	2 cut(s)	208, 1323
BspLI	GGNNCC	8 cut(s)	555, 625, 688, 730, 774, 996, 1213, 1567
BspMAI	CTGCAG	2 cut(s)	30, 1402
BspMI	ACCTGC	2 cut(s)	1292, 1391
BspPI	GGATC	3 cut(s)	1137, 1312, 2112
BspT107I	GGYRCC	3 cut(s)	623, 728, 772
BspTI	CTTAAG	2 cut(s)	2108, 2153
BspTNI	GGTCTC	1 cut(s)	353
BsrDI	GCAATG	3 cut(s)	798, 1189, 1680
BsrFI	RCCGGY	3 cut(s)	178, 1169, 1720
BsrI	ACTGG	6 cut(s)	319, 514, 665, 1718, 1828, 1886
BssAI	RCCGGY	3 cut(s)	178, 1169, 1720
BssECI	CCNNGG	8 cut(s)	123, 363, 637, 682, 1028, 1768, 1861, 1862
BssMI	GATC	8 cut(s)	30, 1129, 1317, 1480, 1930, 2104, 2263, 2295
BssNI	GRCGYC	1 cut(s)	729
BssT1I	CCWWGG	3 cut(s)	363, 682, 1028
Bst2UI	CCWGG	5 cut(s)	522, 638, 1127, 2030, 2118
Bst4CI	ACNGT	5 cut(s)	422, 1042, 1471, 1960, 2065
Bst6I	CTCTTC	1 cut(s)	126
BstACI	GRCGYC	1 cut(s)	729
BstAFI	CTTAAG	2 cut(s)	2108, 2153
BstAPI	GCANNNNNTGC	4 cut(s)	603, 779, 938, 1307
BstC8I	GCNNGC	3 cut(s)	149, 1051, 1534
BstDEI	CTNAG	6 cut(s)	904, 979, 1354, 1673, 2040, 2238
BstDSI	CCRYGG	2 cut(s)	682, 1028
BstEII	GGTNACC	1 cut(s)	1716
BstF5I	GGATG	3 cut(s)	373, 526, 2230
BstH2I	RGCGCY	2 cut(s)	732, 1028
BstHHI	GCGC	3 cut(s)	731, 1027, 1996
BstKTI	GATC	8 cut(s)	33, 1132, 1320, 1483, 1933, 2107, 2266, 2298
BstMAI	GTCTC	4 cut(s)	59, 353, 2043, 2049
BstMBI	GATC	8 cut(s)	30, 1129, 1317, 1480, 1930, 2104, 2263, 2295
BstMWI	GCNNNNNNNGC	8 cut(s)	603, 779, 788, 938, 947, 1307, 1533, 1826
BstNI	CCWGG	5 cut(s)	522, 638, 1127, 2030, 2118
BstNSI	RCATGY	3 cut(s)	151, 1388, 1838
BstPI	GGTNACC	1 cut(s)	1716
BstSCI	CCNGG	9 cut(s)	520, 636, 1125, 1567, 1861, 1862, 2028, 2116, 2202
BstSFI	CTRYAG	3 cut(s)	26, 1345, 1398
BstV2I	GAAGAC	1 cut(s)	1338
BstX2I	RGATCY	1 cut(s)	2104
BstYI	RGATCY	1 cut(s)	2104
BsuI	GTATCC	1 cut(s)	499
BsuRI	GGCC	4 cut(s)	681, 1448, 1594, 2172
BtgI	CCRYGG	2 cut(s)	682, 1028
BtgZI	GCGATG	3 cut(s)	287, 555, 1218
BtrI	CACGTC	2 cut(s)	696, 877
BtsCI	GGATG	3 cut(s)	373, 526, 2230
BtsI	GCAGTG	1 cut(s)	852
BtsIMutI	CAGTG	5 cut(s)	852, 1467, 1821, 1893, 1965
BveI	ACCTGC	2 cut(s)	1292, 1391
Cac8I	GCNNGC	3 cut(s)	149, 1051, 1534
CaiI	CAGNNNCTG	1 cut(s)	764
CciI	TCATGA	2 cut(s)	208, 1323
CfoI	GCGC	3 cut(s)	731, 1027, 1996
Cfr10I	RCCGGY	3 cut(s)	178, 1169, 1720
Cfr13I	GGNCC	6 cut(s)	277, 554, 995, 1520, 1565, 2078
Cfr9I	CCCGGG	1 cut(s)	1862
CsiI	ACCWGGT	2 cut(s)	520, 2116
Csp6I	GTAC	4 cut(s)	229, 442, 796, 1650
CspCI	CAANNNNNGTGG	2 cut(s)	1869, 1904
CviQI	GTAC	4 cut(s)	229, 442, 796, 1650
DdeI	CTNAG	6 cut(s)	904, 979, 1354, 1673, 2040, 2238
DinI	GGCGCC	1 cut(s)	730
DpnI	GATC	8 cut(s)	32, 1131, 1319, 1482, 1932, 2106, 2265, 2297
DpnII	GATC	8 cut(s)	30, 1129, 1317, 1480, 1930, 2104, 2263, 2295
DraIII	CACNNNGTG	1 cut(s)	307
EaeI	YGGCCR	2 cut(s)	1446, 2170
Eam1104I	CTCTTC	1 cut(s)	126
EarI	CTCTTC	1 cut(s)	126
Ecl136II	GAGCTC	2 cut(s)	659, 1701
Eco130I	CCWWGG	3 cut(s)	363, 682, 1028
Eco24I	GRGCYC	2 cut(s)	661, 1703
Eco31I	GGTCTC	1 cut(s)	353
Eco47I	GGWCC	6 cut(s)	277, 554, 995, 1520, 1565, 2078
Eco53kI	GAGCTC	2 cut(s)	659, 1701
Eco57I	CTGAAG	1 cut(s)	1992
Eco88I	CYCGRG	1 cut(s)	1862
Eco91I	GGTNACC	1 cut(s)	1716
EcoICRI	GAGCTC	2 cut(s)	659, 1701
EcoO109I	RGGNCCY	2 cut(s)	554, 995
EcoO65I	GGTNACC	1 cut(s)	1716
EcoRII	CCWGG	5 cut(s)	520, 636, 1125, 2028, 2116
EcoT14I	CCWWGG	3 cut(s)	363, 682, 1028
EcoT38I	GRGCYC	2 cut(s)	661, 1703
EgeI	GGCGCC	1 cut(s)	730
EheI	GGCGCC	1 cut(s)	730
ErhI	CCWWGG	3 cut(s)	363, 682, 1028
FaqI	GGGAC	3 cut(s)	468, 567, 1551
FauI	CCCGC	1 cut(s)	1501
FbaI	TGATCA	2 cut(s)	1480, 2263
FokI	GGATG	3 cut(s)	380, 513, 2237
FriOI	GRGCYC	2 cut(s)	661, 1703
FspBI	CTAG	3 cut(s)	74, 1529, 2280
GlaI	GCGC	3 cut(s)	730, 1026, 1995
GsaI	CCCAGC	1 cut(s)	2311
GsuI	CTGGAG	2 cut(s)	729, 1788
HaeII	RGCGCY	2 cut(s)	732, 1028
HaeIII	GGCC	4 cut(s)	681, 1448, 1594, 2172
HapII	CCGG	8 cut(s)	179, 563, 654, 1170, 1569, 1721, 1863, 2204
HhaI	GCGC	3 cut(s)	731, 1027, 1996
Hin1I	GRCGYC	1 cut(s)	729
Hin6I	GCGC	3 cut(s)	729, 1025, 1994
HinP1I	GCGC	3 cut(s)	729, 1025, 1994
HincII	GTYRAC	1 cut(s)	670
HindII	GTYRAC	1 cut(s)	670
HindIII	AAGCTT	2 cut(s)	329, 614
HpaII	CCGG	8 cut(s)	179, 563, 654, 1170, 1569, 1721, 1863, 2204
HphI	GGTGA	8 cut(s)	181, 193, 491, 1490, 1661, 1710, 1939, 2077
Hpy166II	GTNNAC	6 cut(s)	292, 670, 874, 1606, 1765, 2160
Hpy188III	TCNNGA	6 cut(s)	209, 389, 1324, 1515, 1696, 2048
Hpy8I	GTNNAC	6 cut(s)	292, 670, 874, 1606, 1765, 2160
Hpy99I	CGWCG	2 cut(s)	700, 1046
HpyAV	CCTTC	8 cut(s)	476, 539, 671, 952, 1223, 2019, 2154, 2215
HpyCH4III	ACNGT	5 cut(s)	422, 1042, 1471, 1960, 2065
HpyCH4IV	ACGT	3 cut(s)	695, 735, 876
HpyF10VI	GCNNNNNNNGC	8 cut(s)	603, 779, 788, 938, 947, 1307, 1533, 1826
HpyF3I	CTNAG	6 cut(s)	904, 979, 1354, 1673, 2040, 2238
HpySE526I	ACGT	3 cut(s)	695, 735, 876
Hsp92I	GRCGYC	1 cut(s)	729
HspAI	GCGC	3 cut(s)	729, 1025, 1994
KasI	GGCGCC	1 cut(s)	728
Ksp22I	TGATCA	2 cut(s)	1480, 2263
Kzo9I	GATC	8 cut(s)	30, 1129, 1317, 1480, 1930, 2104, 2263, 2295
LmnI	GCTCC	7 cut(s)	656, 664, 913, 947, 1046, 1495, 1807
LweI	GCATC	4 cut(s)	1351, 1419, 1587, 2215
MabI	ACCWGGT	2 cut(s)	520, 2116
MaeI	CTAG	3 cut(s)	74, 1529, 2280
MaeII	ACGT	3 cut(s)	695, 735, 876
MaeIII	GTNAC	8 cut(s)	830, 1152, 1498, 1716, 1744, 2065, 2112, 2275
MalI	GATC	8 cut(s)	32, 1131, 1319, 1482, 1932, 2106, 2265, 2297
MboI	GATC	8 cut(s)	30, 1129, 1317, 1480, 1930, 2104, 2263, 2295
MboII	GAAGA	7 cut(s)	32, 143, 1281, 1298, 1343, 2219, 2290
MfeI	CAATTG	1 cut(s)	1740
MflI	RGATCY	1 cut(s)	2104
MhlI	GDGCHC	6 cut(s)	661, 704, 882, 1538, 1703, 1970
MlsI	TGGCCA	2 cut(s)	1448, 2172
MluNI	TGGCCA	2 cut(s)	1448, 2172
Mly113I	GGCGCC	1 cut(s)	729
MlyI	GAGTC	3 cut(s)	61, 1989, 2149
MmeI	TCCRAC	2 cut(s)	1024, 2056
Mox20I	TGGCCA	2 cut(s)	1448, 2172
MscI	TGGCCA	2 cut(s)	1448, 2172
MseI	TTAA	5 cut(s)	1218, 1635, 1839, 2109, 2154
MslI	CAYNNNNRTG	3 cut(s)	1674, 2135, 2291
Msp20I	TGGCCA	2 cut(s)	1448, 2172
MspA1I	CMGCKG	4 cut(s)	338, 707, 983, 1754
MspCI	CTTAAG	2 cut(s)	2108, 2153
MspI	CCGG	8 cut(s)	179, 563, 654, 1170, 1569, 1721, 1863, 2204
MspR9I	CCNGG	9 cut(s)	522, 638, 1127, 1569, 1863, 1864, 2030, 2118, 2204
MunI	CAATTG	1 cut(s)	1740
Mva1269I	GAATGC	1 cut(s)	2269
MvaI	CCWGG	5 cut(s)	522, 638, 1127, 2030, 2118
MwoI	GCNNNNNNNGC	8 cut(s)	603, 779, 788, 938, 947, 1307, 1533, 1826
NarI	GGCGCC	1 cut(s)	729
NciI	CCSGG	4 cut(s)	1569, 1863, 1864, 2204
NcoI	CCATGG	2 cut(s)	682, 1028
NdeII	GATC	8 cut(s)	30, 1129, 1317, 1480, 1930, 2104, 2263, 2295
NlaIV	GGNNCC	8 cut(s)	555, 625, 688, 730, 774, 996, 1213, 1567
NmuCI	GTSAC	5 cut(s)	830, 1498, 1716, 1744, 2065
NspI	RCATGY	3 cut(s)	151, 1388, 1838
OliI	CACNNNNGTG	1 cut(s)	1674
PaeI	GCATGC	1 cut(s)	151
PagI	TCATGA	2 cut(s)	208, 1323
PaqCI	CACCTGC	1 cut(s)	1292
PciI	ACATGT	2 cut(s)	1384, 1834
PctI	GAATGC	1 cut(s)	2269
PfeI	GAWTC	9 cut(s)	119, 200, 397, 486, 927, 1033, 1115, 1187, 1619
PflMI	CCANNNNNTGG	3 cut(s)	286, 307, 451
PfoI	TCCNGGA	3 cut(s)	1125, 2028, 2202
PleI	GAGTC	3 cut(s)	60, 1988, 2148
PluTI	GGCGCC	1 cut(s)	732
PpsI	GAGTC	3 cut(s)	60, 1988, 2148
PpuMI	RGGWCCY	2 cut(s)	554, 995
PscI	ACATGT	2 cut(s)	1384, 1834
Psp124BI	GAGCTC	2 cut(s)	661, 1703
Psp5II	RGGWCCY	2 cut(s)	554, 995
Psp6I	CCWGG	5 cut(s)	520, 636, 1125, 2028, 2116
PspEI	GGTNACC	1 cut(s)	1716
PspFI	CCCAGC	1 cut(s)	2307
PspGI	CCWGG	5 cut(s)	520, 636, 1125, 2028, 2116
PspN4I	GGNNCC	8 cut(s)	555, 625, 688, 730, 774, 996, 1213, 1567
PspPI	GGNCC	6 cut(s)	277, 554, 995, 1520, 1565, 2078
PspPPI	RGGWCCY	2 cut(s)	554, 995
PstI	CTGCAG	2 cut(s)	30, 1402
PstNI	CAGNNNCTG	1 cut(s)	764
PsuI	RGATCY	1 cut(s)	2104
PvuII	CAGCTG	2 cut(s)	707, 983
RsaI	GTAC	4 cut(s)	230, 443, 797, 1651
RsaNI	GTAC	4 cut(s)	229, 442, 796, 1650
RseI	CAYNNNNRTG	3 cut(s)	1674, 2135, 2291
SacI	GAGCTC	2 cut(s)	661, 1703
SaqAI	TTAA	5 cut(s)	1218, 1635, 1839, 2109, 2154
Sau3AI	GATC	8 cut(s)	30, 1129, 1317, 1480, 1930, 2104, 2263, 2295
Sau96I	GGNCC	6 cut(s)	277, 554, 995, 1520, 1565, 2078
SchI	GAGTC	3 cut(s)	61, 1989, 2149
ScrFI	CCNGG	9 cut(s)	522, 638, 1127, 1569, 1863, 1864, 2030, 2118, 2204
SduI	GDGCHC	6 cut(s)	661, 704, 882, 1538, 1703, 1970
SexAI	ACCWGGT	2 cut(s)	520, 2116
SfaNI	GCATC	4 cut(s)	1351, 1419, 1587, 2215
SfcI	CTRYAG	3 cut(s)	26, 1345, 1398
SfoI	GGCGCC	1 cut(s)	730
SinI	GGWCC	6 cut(s)	277, 554, 995, 1520, 1565, 2078
SmaI	CCCGGG	1 cut(s)	1864
SmiMI	CAYNNNNRTG	3 cut(s)	1674, 2135, 2291
SmlI	CTYRAG	5 cut(s)	49, 1694, 2046, 2108, 2153
SmoI	CTYRAG	5 cut(s)	49, 1694, 2046, 2108, 2153
SphI	GCATGC	1 cut(s)	151
SsiI	CCGC	5 cut(s)	338, 897, 1494, 1752, 1911
SspDI	GGCGCC	1 cut(s)	728
SspMI	CTAG	3 cut(s)	74, 1529, 2280
SstI	GAGCTC	2 cut(s)	661, 1703
StyD4I	CCNGG	9 cut(s)	520, 636, 1125, 1567, 1861, 1862, 2028, 2116, 2202
StyI	CCWWGG	3 cut(s)	363, 682, 1028
TaaI	ACNGT	5 cut(s)	422, 1042, 1471, 1960, 2065
TaiI	ACGT	3 cut(s)	698, 738, 879
TaqI	TCGA	2 cut(s)	698, 2301
TfiI	GAWTC	9 cut(s)	119, 200, 397, 486, 927, 1033, 1115, 1187, 1619
Tru1I	TTAA	5 cut(s)	1218, 1635, 1839, 2109, 2154
Tru9I	TTAA	5 cut(s)	1218, 1635, 1839, 2109, 2154
TscAI	CASTG	5 cut(s)	859, 1474, 1828, 1893, 1965
TseFI	GTSAC	5 cut(s)	830, 1498, 1716, 1744, 2065
Tsp45I	GTSAC	5 cut(s)	830, 1498, 1716, 1744, 2065
TspDTI	ATGAA	7 cut(s)	225, 558, 1035, 1340, 1500, 1806, 2001
TspGWI	ACGGA	1 cut(s)	939
TspMI	CCCGGG	1 cut(s)	1862
TspRI	CASTG	5 cut(s)	859, 1474, 1828, 1893, 1965
Van91I	CCANNNNNTGG	3 cut(s)	286, 307, 451
Vha464I	CTTAAG	2 cut(s)	2108, 2153
VpaK11BI	GGWCC	6 cut(s)	277, 554, 995, 1520, 1565, 2078
XapI	RAATTY	5 cut(s)	715, 963, 1135, 1147, 1542
XceI	RCATGY	3 cut(s)	151, 1388, 1838
XcmI	CCANNNNNNNNNTGG	1 cut(s)	311
XmaI	CCCGGG	1 cut(s)	1862
XspI	CTAG	3 cut(s)	74, 1529, 2280

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.