Rorug07G0252900

ADP binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0018131
Physical Location & Seq
Forward (+)
23526001 .. 23532107
6107 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0252900.1

Sequence Viewer

Length: 2499 bp
ATGGCTGTTGTATCCCAAAGCCCCAACTTTGAAAGAATTCAACGCACATTGGCAGATTTATTGGGCGTTCAATTGCGGTCGATGACAGAAATTGGAACAGCTGCTGAACTGAATAGGGAGATAATGAGAAGAGAAAAGATCCTTATAATCTTGGACGATGTTTGGAACAGAATAGAATTGTCATCCATAGGAATTCCTAGCTACGAGGAGCTTCAAAAGTGCAATTCCAAAGTCATACTCACCACACGGAGAAGGAATGTCTGTCATGCAATGAAGTGCCAAGAAAAGATCACCCTCAATATCCTCTCAGAAGAAGATTCTTGGACCTTGTTTGTGAGAAATGCAAGAAGGTCTTTTGAATCGACCACTTTTGAGGGTGTAGCGAGGAAAGTAGCTGGAGAATGCAGGGGTCTACCCATTGCATTGGTAGCGGTTGCAAGGGCACTCGGAGATAAAGATCAGGTGGAATGGCAAAAAGCAGCTCGAAGATTAGAGAAGTCGCAATCTGCAACCGTTGAGGATGAGCAAGATGCCTTCAAATGTATAAAATTGAGCTATGATTACTTGAAAGATGAGGATTCCAAGTCATGCTTCTTGCTCTGTTGCCTATTCCCAGAAGACAAGAACATCCGACTAGAAAAGTTATTCAAGTATGCAATCGGGACAGGATTGTTTCTAAGAGATGCCGAAACAATCGAAGAAGCCAGAGGAACAGCAGATTCTGTGGTCAAGTACCTGAAAGATTCTAGCTTGCTTTTGGATAGCGAGAAAAATGGATGTGTAAAGATGCATGATGTCATACGGGATACAGCCCTGAATATTGCAAAATCTAAAGATGGGCACGGGTTTCTGGTAAAAGCTGGCTGTGGTTTAAAGGATTGGCGGCCATGTGGATCATATCAAGGCTACTCTGCGATCTCACTGATGAGGAACGAAATTCGCAAGCTGCCCGAAGAAGAGTTGGTGTGTCCGAATCTCCAGATTTTGTTACTAGACCGCAACATTTATTTAACCAAGATCCCTGAAAAGTTTATCCAAAGTCTGAATGAATTAAGGCTCTTGGATCTTAGCGCCACTGGTATTTCCTATCTACCCCAATCATTCGGTCTCCTTACCAATCTCCAAGCTTTGTATTTAGACTCTTGCTATAAGTTGATTGACATTTCTATAGTGGGAAAACTGAAGAAACTTGAAATTCTTGGTATGATGGCATATCCTGGGGGGGAATTGTCGAGAGAAATAGGAAATTTGACCAATCTAAGGATTTTGGATGTCAGTGGTAGCCGTATGGTCACAATTCCATCTAAAGTGATATCAAGGTTGCATAAATTGGAAGAATTGTACATGGTGTACTATGCATTTGAGGACTGGGGGTGTGAAGCTGAGGGACAAGGAGAAGAAACCAATATTTTTGATGAGGTAGCTGGTTTATCAAATTTGAAAATATTGCAGGTTGGCATATCTGATGCAGAATACATCAGTAAAAATGTTGAGGTCAAACCAGATTGGGATTACTTTTATATATGTATCCGCAAGGCTTCGGACTCCCATGCATACACTATGGAAGATCATAATTCAAGATCCTTGCATTTTAGTGGAGCAACCATGAGTATCTTACCTGATTGGTTTATCAACGCAGTGACAATGAAAACAGAGAAGCTAGAGTATTATTGCTGCGAAGGGATGAATGACATTCTTATGGAATATGACCATGGGAGGTTACATAAACTCAAGCATCTCACAGTAAGTGGTGATTTTTGGGATTCCTATGTGTACTTGAAAGAGTTGATGAACACAACCAGACGAGTTCAAAAAGGACCAGTGTTTGAGAACTTGGAAGAGTTGCATCTGGAAGTTCTTATCCACCTTGAGGAGTTGTGTGTTGGTGAGTTACCGCCTGGGTCTCTTTCCAATCTGAAGGTATTGCATATAGATTCTTGTTATATCTTGAAGAATATATCAAAATTGGTACAGAGACTACCAAATCTGGAGAAGCTGGATTTAAGTGGGATGCGTAATTTGGAATGTGTGTTTGGATGCGAAGGGTTTGAGCCGAAACAATCAAAATTGAGAGAGATGGATTCGTTGGGTCCAAATTCAGCGAATAGCATATGTAATGGTCCTGCCCCACGTGCAATGTTCCAGAGTCTTAGAAGTTTGGTCATTTGGGATTGTGAGTTGCTGCAAAGTCTGTTCGCATCTGGTGTAGCCCAGTGTCTTGTTCAATTGGAAGACCTTTTTGTAGGCAAGTGCCCTTTGTTGGAAAAAGTAATTGAAAAAGCAGTGAACAACGAGAAGACGGTTCTACCAAAATTGAAGAACTTGGTTTTGAAGAAGCTTCCTAAGTTGTATGGTGCAAGTGGTACTGTTGATATTGAGTGTCCTTCATTGGAACACTTATCGTGGTGGATTGCCCCCAGATTTCATTTTCAAACACTTCCTCTCTTTTCAAAGCCGTCGAATTTTCAACGTCTCCTTCTGACTACTTTGGCAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

832

Amino Acids

94.35

Weight (kDa)

5.97

Isoelectric Point (pI)

48.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 3 - 114 1e-18 NB-ARC domain
LRR_8 PF13855 324 - 382 2.9e-08 Leucine rich repeat
LRR_14 PF23598 334 - 402 8.9e-08 Leucine-rich repeat region
LRR_14 PF23598 387 - 450 1.4e-07 Leucine-rich repeat region
LRR_RPS2 PF23247 612 - 688 1.8e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 699 - 783 7.9e-12 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 146
Acc36I ACCTGC 1 cut(s) 1441
AccI GTMKAC 1 cut(s) 412
AciI CCGC 6 cut(s) 76, 431, 883, 997, 1531, 1895
AclWI GGATC 5 cut(s) 133, 901, 1012, 1071, 1575
AcoI YGGCCR 1 cut(s) 884
AcsI RAATTY 8 cut(s) 36, 192, 936, 1194, 1246, 1435, 2095, 2461
AcuI CTGAAG 2 cut(s) 1202, 1937
AcvI CACGTG 1 cut(s) 2132
AfaI GTAC 6 cut(s) 734, 1343, 1352, 1775, 1971, 2365
AfiI CCNNNNNNNGG 3 cut(s) 1260, 1870, 2260
AjnI CCWGG 2 cut(s) 1216, 1897
AjuI GAANNNNNNNTTGG 4 cut(s) 575, 607, 2016, 2048
Alw26I GTCTC 4 cut(s) 1112, 1908, 1969, 2477
AlwI GGATC 5 cut(s) 133, 901, 1012, 1071, 1575
AlwNI CAGNNNCTG 2 cut(s) 104, 722
AoxI GGCC 1 cut(s) 884
ApeKI GCWGC 6 cut(s) 101, 479, 946, 1674, 2182, 2492
ApoI RAATTY 8 cut(s) 36, 192, 936, 1194, 1246, 1435, 2095, 2461
Asp700I GAANNNNTTC 1 cut(s) 36
AspLEI GCGC 1 cut(s) 1073
AspS9I GGNCC 4 cut(s) 324, 1817, 2090, 2120
AsuHPI GGTGA 4 cut(s) 232, 283, 1763, 1898
AvaII GGWCC 4 cut(s) 324, 1817, 2090, 2120
BaeGI GKGCMC 3 cut(s) 445, 843, 2255
BbrPI CACGTG 1 cut(s) 2132
BbsI GAAGAC 3 cut(s) 624, 2238, 2303
BbvCI CCTCAGC 1 cut(s) 1383
BbvI GCAGC 5 cut(s) 88, 491, 933, 1661, 2169
BccI CCATC 4 cut(s) 830, 1201, 1309, 2071
BceAI ACGGC 2 cut(s) 1269, 2440
BciT130I CCWGG 2 cut(s) 1218, 1899
BciVI GTATCC 3 cut(s) 22, 799, 1538
BcoDI GTCTC 4 cut(s) 1112, 1908, 1969, 2477
BfaI CTAG 5 cut(s) 198, 635, 747, 992, 1661
BfmI CTRYAG 1 cut(s) 1167
BfoI RGCGCY 1 cut(s) 1074
BfuAI ACCTGC 1 cut(s) 1441
BfuI GTATCC 3 cut(s) 22, 799, 1538
BisI GCNGC 7 cut(s) 102, 480, 884, 947, 1675, 2183, 2493
BlsI GCNGC 7 cut(s) 103, 481, 885, 948, 1676, 2184, 2494
Bme1390I CCNGG 2 cut(s) 1218, 1899
Bme18I GGWCC 4 cut(s) 324, 1817, 2090, 2120
BmgT120I GGNCC 4 cut(s) 324, 1817, 2090, 2120
BmiI GGNNCC 1 cut(s) 2091
BmrFI CCNGG 2 cut(s) 1218, 1899
BmrI ACTGGG 2 cut(s) 1378, 2206
BmsI GCATC 9 cut(s) 520, 673, 777, 1456, 1744, 1855, 2001, 2027, 2207
BmuI ACTGGG 2 cut(s) 1378, 2206
BpiI GAAGAC 3 cut(s) 624, 2238, 2303
BpmI CTGGAG 3 cut(s) 417, 962, 2009
Bpu10I CCTNAGC 1 cut(s) 1383
BpuEI CTTGAG 2 cut(s) 1715, 1889
BsaAI YACGTR 1 cut(s) 2132
BsaBI GATNNNNATC 1 cut(s) 456
BsaI GGTCTC 2 cut(s) 1112, 1908
BsaJI CCNNGG 3 cut(s) 1217, 1711, 1898
Bsc4I CCNNNNNNNGG 3 cut(s) 1260, 1870, 2260
Bse1I ACTGG 4 cut(s) 1081, 1373, 1820, 2212
Bse3DI GCAATG 3 cut(s) 276, 417, 2142
Bse8I GATNNNNATC 1 cut(s) 456
BseBI CCWGG 2 cut(s) 1218, 1899
BseDI CCNNGG 3 cut(s) 1217, 1711, 1898
BseGI GGATG 8 cut(s) 182, 526, 627, 782, 1276, 1689, 2016, 2042
BseJI GATNNNNATC 1 cut(s) 456
BseLI CCNNNNNNNGG 3 cut(s) 1260, 1870, 2260
BseMI GCAATG 3 cut(s) 276, 417, 2142
BseMII CTCAG 2 cut(s) 321, 1374
BseNI ACTGG 4 cut(s) 1081, 1373, 1820, 2212
BseRI GAGGAG 2 cut(s) 221, 1886
BseSI GKGCMC 3 cut(s) 445, 843, 2255
BseXI GCAGC 5 cut(s) 88, 491, 933, 1661, 2169
Bsh1285I CGRYCG 1 cut(s) 80
BshFI GGCC 1 cut(s) 886
BsiEI CGRYCG 1 cut(s) 80
BslFI GGGAC 2 cut(s) 676, 1401
BslI CCNNNNNNNGG 3 cut(s) 1260, 1870, 2260
BsmAI GTCTC 4 cut(s) 1112, 1908, 1969, 2477
BsmBI CGTCTC 1 cut(s) 2477
BsmFI GGGAC 2 cut(s) 676, 1401
BsmI GAATGC 1 cut(s) 407
BsnI GGCC 1 cut(s) 886
Bso31I GGTCTC 2 cut(s) 1112, 1908
Bsp1286I GDGCHC 3 cut(s) 445, 843, 2255
Bsp1407I TGTACA 1 cut(s) 1341
Bsp143I GATC 9 cut(s) 138, 288, 457, 893, 915, 1017, 1063, 1567, 1580
Bsp19I CCATGG 1 cut(s) 1711
BspACI CCGC 6 cut(s) 76, 431, 883, 997, 1531, 1895
BspANI GGCC 1 cut(s) 886
BspCNI CTCAG 2 cut(s) 320, 1375
BspLI GGNNCC 1 cut(s) 2091
BspMI ACCTGC 1 cut(s) 1441
BspPI GGATC 5 cut(s) 133, 901, 1012, 1071, 1575
BspTNI GGTCTC 2 cut(s) 1112, 1908
BsrDI GCAATG 3 cut(s) 276, 417, 2142
BsrGI TGTACA 1 cut(s) 1341
BsrI ACTGG 4 cut(s) 1081, 1373, 1820, 2212
BssECI CCNNGG 3 cut(s) 1217, 1711, 1898
BssMI GATC 9 cut(s) 138, 288, 457, 893, 915, 1017, 1063, 1567, 1580
BssT1I CCWWGG 1 cut(s) 1711
Bst2UI CCWGG 2 cut(s) 1218, 1899
Bst4CI ACNGT 4 cut(s) 514, 1744, 2302, 2368
Bst6I CTCTTC 3 cut(s) 124, 951, 1833
BstAUI TGTACA 1 cut(s) 1341
BstBAI YACGTR 1 cut(s) 2132
BstC8I GCNNGC 3 cut(s) 752, 862, 944
BstDEI CTNAG 7 cut(s) 307, 677, 1067, 1259, 1383, 2150, 2343
BstDSI CCRYGG 1 cut(s) 1711
BstF5I GGATG 8 cut(s) 182, 526, 627, 782, 1276, 1689, 2016, 2042
BstH2I RGCGCY 1 cut(s) 1074
BstHHI GCGC 1 cut(s) 1073
BstKTI GATC 9 cut(s) 141, 291, 460, 896, 918, 1020, 1066, 1570, 1583
BstMAI GTCTC 4 cut(s) 1112, 1908, 1969, 2477
BstMBI GATC 9 cut(s) 138, 288, 457, 893, 915, 1017, 1063, 1567, 1580
BstMCI CGRYCG 1 cut(s) 80
BstMWI GCNNNNNNNGC 2 cut(s) 428, 2132
BstNI CCWGG 2 cut(s) 1218, 1899
BstSCI CCNGG 2 cut(s) 1216, 1897
BstSFI CTRYAG 1 cut(s) 1167
BstSLI GKGCMC 3 cut(s) 445, 843, 2255
BstV1I GCAGC 5 cut(s) 88, 491, 933, 1661, 2169
BstV2I GAAGAC 3 cut(s) 624, 2238, 2303
BstX2I RGATCY 4 cut(s) 138, 1017, 1063, 1580
BstXI CCANNNNNNTGG 1 cut(s) 424
BstYI RGATCY 4 cut(s) 138, 1017, 1063, 1580
BsuI GTATCC 3 cut(s) 22, 799, 1538
BsuRI GGCC 1 cut(s) 886
BtgI CCRYGG 1 cut(s) 1711
BtsCI GGATG 8 cut(s) 182, 526, 627, 782, 1276, 1689, 2016, 2042
BtsI GCAGTG 2 cut(s) 1644, 2289
BtsIMutI CAGTG 7 cut(s) 920, 1074, 1282, 1644, 1827, 2219, 2289
BveI ACCTGC 1 cut(s) 1441
Cac8I GCNNGC 3 cut(s) 752, 862, 944
CaiI CAGNNNCTG 2 cut(s) 104, 722
CfoI GCGC 1 cut(s) 1073
Cfr13I GGNCC 4 cut(s) 324, 1817, 2090, 2120
Csp6I GTAC 6 cut(s) 733, 1342, 1351, 1774, 1970, 2364
CviAII CATG 9 cut(s) 266, 588, 791, 888, 1345, 1550, 1606, 1712, 2496
CviQI GTAC 6 cut(s) 733, 1342, 1351, 1774, 1970, 2364
DdeI CTNAG 7 cut(s) 307, 677, 1067, 1259, 1383, 2150, 2343
DpnI GATC 9 cut(s) 140, 290, 459, 895, 917, 1019, 1065, 1569, 1582
DpnII GATC 9 cut(s) 138, 288, 457, 893, 915, 1017, 1063, 1567, 1580
DraI TTTAAA 1 cut(s) 873
EaeI YGGCCR 1 cut(s) 884
Eam1104I CTCTTC 3 cut(s) 124, 951, 1833
EarI CTCTTC 3 cut(s) 124, 951, 1833
Eco130I CCWWGG 1 cut(s) 1711
Eco31I GGTCTC 2 cut(s) 1112, 1908
Eco32I GATATC 1 cut(s) 1314
Eco47I GGWCC 4 cut(s) 324, 1817, 2090, 2120
Eco57I CTGAAG 2 cut(s) 1202, 1937
Eco72I CACGTG 1 cut(s) 2132
EcoRI GAATTC 2 cut(s) 36, 192
EcoRII CCWGG 2 cut(s) 1216, 1897
EcoRV GATATC 1 cut(s) 1314
EcoT14I CCWWGG 1 cut(s) 1711
EcoT22I ATGCAT 3 cut(s) 792, 1360, 1555
ErhI CCWWGG 1 cut(s) 1711
Esp3I CGTCTC 1 cut(s) 2477
FaeI CATG 9 cut(s) 269, 591, 794, 891, 1348, 1553, 1609, 1715, 2499
FalI AAGNNNNNCTT 4 cut(s) 337, 369, 575, 607
FaqI GGGAC 2 cut(s) 676, 1401
FatI CATG 9 cut(s) 265, 587, 790, 887, 1344, 1549, 1605, 1711, 2495
FauNDI CATATG 1 cut(s) 2111
FblI GTMKAC 1 cut(s) 412
Fnu4HI GCNGC 7 cut(s) 102, 480, 884, 947, 1675, 2183, 2493
FokI GGATG 8 cut(s) 169, 533, 614, 789, 1283, 1696, 2023, 2049
Fsp4HI GCNGC 7 cut(s) 102, 480, 884, 947, 1675, 2183, 2493
FspBI CTAG 5 cut(s) 198, 635, 747, 992, 1661
GlaI GCGC 1 cut(s) 1072
GluI GCNGC 7 cut(s) 102, 480, 884, 947, 1675, 2183, 2493
GsuI CTGGAG 3 cut(s) 417, 962, 2009
HaeII RGCGCY 1 cut(s) 1074
HaeIII GGCC 1 cut(s) 886
HhaI GCGC 1 cut(s) 1073
Hin1II CATG 9 cut(s) 269, 591, 794, 891, 1348, 1553, 1609, 1715, 2499
Hin6I GCGC 1 cut(s) 1071
HinP1I GCGC 1 cut(s) 1071
HindIII AAGCTT 2 cut(s) 1125, 2336
HphI GGTGA 4 cut(s) 232, 283, 1763, 1898
Hpy166II GTNNAC 4 cut(s) 413, 1351, 1774, 2287
Hpy188I TCNGA 9 cut(s) 310, 449, 632, 972, 1044, 1465, 1543, 1917, 2481
Hpy188III TCNNGA 8 cut(s) 661, 979, 1233, 1578, 1850, 1948, 1988, 2143
Hpy8I GTNNAC 4 cut(s) 413, 1351, 1774, 2287
Hpy99I CGWCG 1 cut(s) 2461
HpyAV CCTTC 8 cut(s) 246, 342, 544, 1673, 1912, 2036, 2394, 2486
HpyCH4III ACNGT 4 cut(s) 514, 1744, 2302, 2368
HpyCH4IV ACGT 2 cut(s) 2131, 2470
HpyF10VI GCNNNNNNNGC 2 cut(s) 428, 2132
HpyF3I CTNAG 7 cut(s) 307, 677, 1067, 1259, 1383, 2150, 2343
HpySE526I ACGT 2 cut(s) 2131, 2470
Hsp92II CATG 9 cut(s) 269, 591, 794, 891, 1348, 1553, 1609, 1715, 2499
HspAI GCGC 1 cut(s) 1071
Kzo9I GATC 9 cut(s) 138, 288, 457, 893, 915, 1017, 1063, 1567, 1580
LmnI GCTCC 2 cut(s) 208, 1598
Lsp1109I GCAGC 5 cut(s) 88, 491, 933, 1661, 2169
LweI GCATC 9 cut(s) 520, 673, 777, 1456, 1744, 1855, 2001, 2027, 2207
MaeI CTAG 5 cut(s) 198, 635, 747, 992, 1661
MaeII ACGT 2 cut(s) 2131, 2470
MaeIII GTNAC 5 cut(s) 987, 1291, 1639, 1719, 1890
MalI GATC 9 cut(s) 140, 290, 459, 895, 917, 1019, 1065, 1569, 1582
MboI GATC 9 cut(s) 138, 288, 457, 893, 915, 1017, 1063, 1567, 1580
MfeI CAATTG 2 cut(s) 71, 2225
MflI RGATCY 4 cut(s) 138, 1017, 1063, 1580
MhlI GDGCHC 3 cut(s) 445, 843, 2255
MlyI GAGTC 3 cut(s) 1133, 1538, 2155
MmeI TCCRAC 2 cut(s) 655, 2241
Mph1103I ATGCAT 3 cut(s) 792, 1360, 1555
MroXI GAANNNNTTC 1 cut(s) 36
MseI TTAA 4 cut(s) 872, 1010, 1052, 2003
MslI CAYNNNNRTG 2 cut(s) 1593, 1697
MspA1I CMGCKG 1 cut(s) 101
MspR9I CCNGG 2 cut(s) 1218, 1899
MunI CAATTG 2 cut(s) 71, 2225
Mva1269I GAATGC 1 cut(s) 407
MvaI CCWGG 2 cut(s) 1218, 1899
MwoI GCNNNNNNNGC 2 cut(s) 428, 2132
NcoI CCATGG 1 cut(s) 1711
NdeI CATATG 1 cut(s) 2111
NdeII GATC 9 cut(s) 138, 288, 457, 893, 915, 1017, 1063, 1567, 1580
NlaIII CATG 9 cut(s) 269, 591, 794, 891, 1348, 1553, 1609, 1715, 2499
NlaIV GGNNCC 1 cut(s) 2091
NmuCI GTSAC 2 cut(s) 1291, 1639
NsiI ATGCAT 3 cut(s) 792, 1360, 1555
PctI GAATGC 1 cut(s) 407
PdmI GAANNNNTTC 1 cut(s) 36
PfeI GAWTC 9 cut(s) 317, 359, 578, 719, 743, 973, 1763, 1934, 2081
PkrI GCNGC 7 cut(s) 103, 481, 885, 948, 1676, 2184, 2494
PleI GAGTC 3 cut(s) 1133, 1538, 2154
PmaCI CACGTG 1 cut(s) 2132
PmlI CACGTG 1 cut(s) 2132
PpsI GAGTC 3 cut(s) 1133, 1538, 2154
Ppu21I YACGTR 1 cut(s) 2132
PsiI TTATAA 1 cut(s) 146
Psp6I CCWGG 2 cut(s) 1216, 1897
PspCI CACGTG 1 cut(s) 2132
PspGI CCWGG 2 cut(s) 1216, 1897
PspN4I GGNNCC 1 cut(s) 2091
PspPI GGNCC 4 cut(s) 324, 1817, 2090, 2120
PstNI CAGNNNCTG 2 cut(s) 104, 722
PsuI RGATCY 4 cut(s) 138, 1017, 1063, 1580
PvuII CAGCTG 1 cut(s) 101
RsaI GTAC 6 cut(s) 734, 1343, 1352, 1775, 1971, 2365
RsaNI GTAC 6 cut(s) 733, 1342, 1351, 1774, 1970, 2364
RseI CAYNNNNRTG 2 cut(s) 1593, 1697
SaqAI TTAA 4 cut(s) 872, 1010, 1052, 2003
SatI GCNGC 7 cut(s) 102, 480, 884, 947, 1675, 2183, 2493
Sau3AI GATC 9 cut(s) 138, 288, 457, 893, 915, 1017, 1063, 1567, 1580
Sau96I GGNCC 4 cut(s) 324, 1817, 2090, 2120
SchI GAGTC 3 cut(s) 1133, 1538, 2155
ScrFI CCNGG 2 cut(s) 1218, 1899
SduI GDGCHC 3 cut(s) 445, 843, 2255
SfaNI GCATC 9 cut(s) 520, 673, 777, 1456, 1744, 1855, 2001, 2027, 2207
SfcI CTRYAG 1 cut(s) 1167
SinI GGWCC 4 cut(s) 324, 1817, 2090, 2120
SmiMI CAYNNNNRTG 2 cut(s) 1593, 1697
SmlI CTYRAG 2 cut(s) 1730, 1868
SmoI CTYRAG 2 cut(s) 1730, 1868
SsiI CCGC 6 cut(s) 76, 431, 883, 997, 1531, 1895
SspI AATATT 3 cut(s) 820, 1408, 1446
SspMI CTAG 5 cut(s) 198, 635, 747, 992, 1661
StyD4I CCNGG 2 cut(s) 1216, 1897
StyI CCWWGG 1 cut(s) 1711
TaaI ACNGT 4 cut(s) 514, 1744, 2302, 2368
TaiI ACGT 2 cut(s) 2134, 2473
TaqI TCGA 6 cut(s) 80, 362, 484, 696, 1232, 2459
TaqII GACCGA 1 cut(s) 1094
TatI WGTACW 3 cut(s) 1341, 1350, 1773
TauI GCSGC 1 cut(s) 886
TfiI GAWTC 9 cut(s) 317, 359, 578, 719, 743, 973, 1763, 1934, 2081
Tru1I TTAA 4 cut(s) 872, 1010, 1052, 2003
Tru9I TTAA 4 cut(s) 872, 1010, 1052, 2003
TscAI CASTG 7 cut(s) 927, 1081, 1282, 1644, 1827, 2219, 2289
TseFI GTSAC 2 cut(s) 1291, 1639
TseI GCWGC 6 cut(s) 101, 479, 946, 1674, 2182, 2492
Tsp45I GTSAC 2 cut(s) 1291, 1639
TspDTI ATGAA 7 cut(s) 287, 1062, 1661, 1700, 1805, 2376, 2414
TspGWI ACGGA 1 cut(s) 262
TspRI CASTG 7 cut(s) 927, 1081, 1282, 1644, 1827, 2219, 2289
VpaK11BI GGWCC 4 cut(s) 324, 1817, 2090, 2120
XapI RAATTY 8 cut(s) 36, 192, 936, 1194, 1246, 1435, 2095, 2461
XmiI GTMKAC 1 cut(s) 412
XmnI GAANNNNTTC 1 cut(s) 36
XspI CTAG 5 cut(s) 198, 635, 747, 992, 1661
Zsp2I ATGCAT 3 cut(s) 792, 1360, 1555
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.