Rorug07G0261000

TIP41-like family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0018202
Physical Location & Seq
Reverse (-)
24526706 .. 24529601
2896 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0261000.1

Sequence Viewer

Length: 2862 bp
ATGGCGGAGAGTGCAGTCAAGTTTCTGCTTGACAAGCTTGCACCCCTTTTTGAAAATGATTTGCAACTTTTGGGAGGAGGGGTTAGGGAAGAAATTGTGTATCTAAGAGGAGAGCTGGAGCGGATGACGGCTTTTCTGAGGGTTGCTGATGCATCTGAAGAGAGTGATGAGGAACTCAAAGTATGGGTTAAGCAACTAAGAGACATTGCTCACGACAGTGAAGATGTTCTTGATGAATTTACACTTCTGCAGCCGCATGATCATGGGGAGGAGGGATTATATGGTTCAATCCATAGGCTTTCTTGCTGCATTAAGAACACAAAAGCTCGATACCGAATTGCTTCTGAATTACAAGGCATCAACTTGAGAATCAGAAAAATCTCGGAGGTTCACAAGAGACTCCGTCACAAATTCAATATGGCTGAACAAGGTGCAGGCTCCAGCAGTGCATGCAATACATGGGATGACCATCGAGGTGATGCTCTACTTCTAGAGAAGACTGATATTGTAGGCATTGACAAGCCCATAAAGCAGCTGGTTGGCTGGCTAGTCAAGGGTGGTTCTGGACGTGAAGTAGTTTCTGTGGCTGGAATGGGGGGGATGGGGAAAACTACCCTGGTCAAGCAAGTCTATGATGCTGCAGAAGTGAAGAAACATTTCAAAGTTTGTGCTTGGATCACTGTTACTCTGTCTTTCAAACTTGGAGAACTCCTCAAAGACATGGTTCATCAACTCCACAACGCAATCCGCAGGCCTGTTCCAGAAGGAATCAATACCATGAACAACAATCACTTGAAAACAATAATCAAGGACTTCCTGCAGAAAAGGAGGTATCTCATTGTTTTAGATGATGTATGGCACTTGCACGGATGGGATGCTGTGAAATATGCCTTGCCTAACAATACTTCTGGTAGCCGAGTCATTCTCACTACTCGAAATGCTGAAGTAGCCTCTACAACCAGTGTAGAATCTGGAGGGAAAGCCTACAATTTGGAGCCTCTGCCCCAATCGGAGTCTTGGGAACTTTTATGCAAGAAGACATTCCAGGGGAAATCATGCCCTCCTCATCTAGAGGAAATCTGTACTGATGTTTTGAAGAAGTGTGAGGGGTTGCCCCTTGCAATTGTGGCAGTCAGTGGTGTTTTGTCTACCAAGGACAAGCGTCGGATTGATGAGTGGGATATGGTTGGCCATAGTCTTGGAGCTGAAATTGAGGGCAATGACAAACTGAGGGACTTAAAAAAAGTACTTTCTCTCAGTTTCAATGATTTACCGTACTATCTAAAATCTTGCTTCTTGTACCTGAGCATCTTTCCTGAGGATTATCTAATTGAGCATATGAGGCTTGTTCGATTATGGATGGCAGAGGGGTTCATCGAACCAAAAGATGGCAAAACATTGGAAGATGTTGCAGAGGACTACCTCAGTGAACTACTGAATAGAGGCATGATTCAAGCTGCTGACACAACATCTGATGGAAGGGTCAAGAACATTCGTGTGCATGACCTTTTTCGAGAGATTATCACCTCTAAGATAAGAGATCAGAACTTTGCCACAATATCTAAAGAGCAAAATGTTCCCTGGCCTGATAAAGTGCGCCGCCTGTCAGTGCATAACTCAATGCAATATGTACAGAAAAACAGGTGTGTTTTTCAACTGCGTTCTCTATTTATGTTTAGAGTTACTGAGAAGCCATTACTACAAAAGTATTTTCCTGGAGGGTTCAGACTTCTTAATGTCTTAGACTTGCAAAATGCGCCTCTAAATGTTTTCCCAGTTGAAGTTGTCAACCTTTTCTTTCTAAAGTATCTGAGTTTGAAAGGTACCAAGGTGAAAACCATTCCAAGGTTCATTGGGAAGCTTCAAAACCTGGAGACCTTGGATCTTAAACATTCTCTGGTTACTGAACTCCCAGTTGAAATCTTAAAGCTCGAACATCTACGTCATCTCCTGGTATATCGTTACGAATTTGTACCTTATGGAGATTTTCACTCAAAATATGGTTTCAAGGTACTTGCGAAAATTGGGGTTTTGACATCCCTTCAAAAGCTCTGTTTCATCAAGGCAAACGAAGATGGTGGTGCCATATTAAGAGAGCTCAGGAACCTAGTTCAGTTGAGAAAGTTAGGCATTGTACAGATGAGGAAAGAAGATGGAAAAGTTCTTTGTTCATCAATTGAAAAGCTGAACAAACTTTGCACGTTGAACATAACTTCAGTAGAAGAGGAAGAGATTATTGATTTGCAGCAGCTTTCTTCTCCCCCTCTACTGCTTCAGCGCCTCTACTTGCGAGGACGGTTGGAGACAATACCTCACTGGATTCCTTCTCTGCATAGCCTTGTCAGGTTATATTTGAAATGGAGTAGGTTAAAGGATGATCCACTTGTATTCCTTCAATATCTGCCCAACCTAGTACACCTCGAACTATCTCAGGTGTTTGAAGGAGACACATTATGCTTTAAAGCTGGAGGGTTCAAGAAGCTCAAACATTTGGGTATCGACCAATTTGAGGGACTTAGATGCATACAGGTGCAGTTGGGAGCAATGCCTTCTGTAAAAAAGCTAAGCATCCAGCGCTGCAAGTTATTGGAGAAGGTGCCATCAGGCATTGAACACCTGAGCAAATTGAAGGTGCTTGAGTTTTTCGATATGCCAGAAACATTAATCAAGACTCTACGTCCACATGAGAAAGACAATGACTATTGGAAAGTTGCACATATCCCCGAAGTTTATTTCACCTACTGGAAAGAGTGTGGATGGGAGGTCTATCCTCTAGAGGGTTTGAGTGAAGGAGAAAACTTTCCTCACGATCAGCCTAGTTCTGTCATGAAGAGCCATGAACTTGAAACTCGTTGGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko04138 map04138
Pfam Domains
Protein Families
TIP41

Protein Analysis

953

Amino Acids

109.32

Weight (kDa)

8.49

Isoelectric Point (pI)

39.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 86 1.5e-21 Rx N-terminal domain
NB-ARC PF00931 173 - 352 2.4e-42 NB-ARC domain
AAA_16 PF13191 176 - 285 2e-06 AAA ATPase domain
WHD_DRP PF23559 437 - 508 2e-24 Disease resistance protein Winged helix domain
LRR_14 PF23598 552 - 880 2.8e-46 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1823
AccB1I GGYRCC 3 cut(s) 1823, 2081, 2596
AccB7I CCANNNNNTGG 1 cut(s) 1388
AccBSI CCGCTC 1 cut(s) 121
AccI GTMKAC 1 cut(s) 1148
AciI CCGC 5 cut(s) 5, 121, 254, 748, 1600
AclWI GGATC 3 cut(s) 683, 1890, 2372
AcoI YGGCCR 1 cut(s) 1189
AcsI RAATTY 3 cut(s) 236, 410, 1967
AcuI CTGAAG 4 cut(s) 177, 963, 2199, 2258
AfeI AGCGCT 1 cut(s) 2576
AfiI CCNNNNNNNGG 4 cut(s) 1388, 1845, 2509, 2777
AhdI GACNNNNNGTC 1 cut(s) 2676
AjiI CACGTC 1 cut(s) 569
AjnI CCWGG 6 cut(s) 615, 1044, 1580, 1714, 1869, 1950
AleI CACNNNNGTG 1 cut(s) 216
Alw21I GWGCWC 1 cut(s) 2100
Alw26I GTCTC 5 cut(s) 195, 391, 1868, 2297, 2439
AlwI GGATC 3 cut(s) 683, 1890, 2372
Aor51HI AGCGCT 1 cut(s) 2576
AoxI GGCC 3 cut(s) 752, 1189, 1583
ApeKI GCWGC 8 cut(s) 250, 306, 532, 638, 1457, 2245, 2248, 2577
ApoI RAATTY 3 cut(s) 236, 410, 1967
AseI ATTAAT 1 cut(s) 2663
Asp700I GAANNNNTTC 5 cut(s) 225, 340, 656, 1040, 2799
Asp718I GGTACC 1 cut(s) 1823
AspLEI GCGC 4 cut(s) 1599, 1759, 2280, 2577
AsuHPI GGTGA 4 cut(s) 488, 1516, 1843, 2728
AxyI CCTNAGG 1 cut(s) 1317
BaeI ACNNNNGTAYC 2 cut(s) 1815, 1848
BalI TGGCCA 1 cut(s) 1191
BanI GGYRCC 3 cut(s) 1823, 2081, 2596
BanII GRGCYC 1 cut(s) 2100
BbsI GAAGAC 2 cut(s) 503, 1043
Bbv12I GWGCWC 1 cut(s) 2100
BbvI GCAGC 8 cut(s) 262, 293, 544, 625, 1444, 2257, 2260, 2564
BceAI ACGGC 1 cut(s) 144
BciT130I CCWGG 6 cut(s) 617, 1046, 1582, 1716, 1871, 1952
BclI TGATCA 1 cut(s) 259
BcoDI GTCTC 5 cut(s) 195, 391, 1868, 2297, 2439
BfaI CTAG 7 cut(s) 491, 548, 1070, 2108, 2411, 2774, 2817
BfmI CTRYAG 3 cut(s) 248, 639, 818
BfoI RGCGCY 2 cut(s) 2281, 2578
BlpI GCTNAGC 1 cut(s) 2564
BmcAI AGTACT 1 cut(s) 1248
Bme1390I CCNGG 6 cut(s) 617, 1046, 1582, 1716, 1871, 1952
BmeRI GACNNNNNGTC 1 cut(s) 2676
BmgBI CACGTC 1 cut(s) 569
BmiI GGNNCC 6 cut(s) 439, 996, 1825, 2083, 2105, 2598
BmrFI CCNGG 6 cut(s) 617, 1046, 1582, 1716, 1871, 1952
BmrI ACTGGG 2 cut(s) 1769, 1907
BmsI GCATC 9 cut(s) 139, 161, 366, 469, 625, 865, 1317, 2510, 2577
BmuI ACTGGG 2 cut(s) 1769, 1907
BoxI GACNNNNGTC 1 cut(s) 1161
BpiI GAAGAC 2 cut(s) 503, 1043
BplI GAGNNNNNCTC 4 cut(s) 696, 728, 909, 941
BpmI CTGGAG 6 cut(s) 137, 424, 993, 1737, 1892, 2487
Bpu10I CCTNAGC 3 cut(s) 1304, 2099, 2618
Bpu1102I GCTNAGC 1 cut(s) 2564
BpuEI CTTGAG 2 cut(s) 385, 2657
BsaBI GATNNNNATC 1 cut(s) 468
BsaI GGTCTC 1 cut(s) 1868
BsaJI CCNNGG 7 cut(s) 615, 1045, 1152, 1580, 1827, 1844, 1878
BsaXI ACNNNNNCTCC 4 cut(s) 66, 96, 1932, 1962
Bsc4I CCNNNNNNNGG 4 cut(s) 1388, 1845, 2509, 2777
Bse1I ACTGG 5 cut(s) 960, 1775, 1913, 2321, 2747
Bse21I CCTNAGG 1 cut(s) 1317
Bse3DI GCAATG 3 cut(s) 204, 1225, 2550
Bse8I GATNNNNATC 1 cut(s) 468
BseBI CCWGG 6 cut(s) 617, 1046, 1582, 1716, 1871, 1952
BseDI CCNNGG 7 cut(s) 615, 1045, 1152, 1580, 1827, 1844, 1878
BseJI GATNNNNATC 1 cut(s) 468
BseLI CCNNNNNNNGG 4 cut(s) 1388, 1845, 2509, 2777
BseMI GCAATG 3 cut(s) 204, 1225, 2550
BseNI ACTGG 5 cut(s) 960, 1775, 1913, 2321, 2747
BseRI GAGGAG 5 cut(s) 90, 123, 284, 701, 1053
BseXI GCAGC 8 cut(s) 262, 293, 544, 625, 1444, 2257, 2260, 2564
BsgI GTGCAG 3 cut(s) 33, 453, 2552
BshFI GGCC 3 cut(s) 754, 1191, 1585
BshNI GGYRCC 3 cut(s) 1823, 2081, 2596
BsiHKAI GWGCWC 1 cut(s) 2100
BslFI GGGAC 2 cut(s) 1247, 2526
BslI CCNNNNNNNGG 4 cut(s) 1388, 1845, 2509, 2777
BsmAI GTCTC 5 cut(s) 195, 391, 1868, 2297, 2439
BsmFI GGGAC 2 cut(s) 1247, 2526
BsnI GGCC 3 cut(s) 754, 1191, 1585
Bso31I GGTCTC 1 cut(s) 1868
Bsp1286I GDGCHC 1 cut(s) 2100
Bsp1407I TGTACA 2 cut(s) 1630, 2134
Bsp143I GATC 6 cut(s) 259, 675, 1540, 1882, 2377, 2809
Bsp1720I GCTNAGC 1 cut(s) 2564
BspACI CCGC 5 cut(s) 5, 121, 254, 748, 1600
BspANI GGCC 3 cut(s) 754, 1191, 1585
BspHI TCATGA 1 cut(s) 2826
BspLI GGNNCC 6 cut(s) 439, 996, 1825, 2083, 2105, 2598
BspMAI CTGCAG 3 cut(s) 252, 643, 822
BspPI GGATC 3 cut(s) 683, 1890, 2372
BspQI GCTCTTC 1 cut(s) 2825
BspT107I GGYRCC 3 cut(s) 1823, 2081, 2596
BspTNI GGTCTC 1 cut(s) 1868
BsrBI CCGCTC 1 cut(s) 121
BsrDI GCAATG 3 cut(s) 204, 1225, 2550
BsrGI TGTACA 2 cut(s) 1630, 2134
BsrI ACTGG 5 cut(s) 960, 1775, 1913, 2321, 2747
BssECI CCNNGG 7 cut(s) 615, 1045, 1152, 1580, 1827, 1844, 1878
BssMI GATC 6 cut(s) 259, 675, 1540, 1882, 2377, 2809
BssT1I CCWWGG 4 cut(s) 1152, 1827, 1844, 1878
Bst2UI CCWGG 6 cut(s) 617, 1046, 1582, 1716, 1871, 1952
Bst4CI ACNGT 4 cut(s) 218, 682, 1275, 2298
Bst6I CTCTTC 4 cut(s) 153, 2217, 2223, 2825
BstAPI GCANNNNNTGC 1 cut(s) 450
BstAUI TGTACA 2 cut(s) 1630, 2134
BstC8I GCNNGC 5 cut(s) 39, 436, 451, 545, 752
BstH2I RGCGCY 2 cut(s) 2281, 2578
BstHHI GCGC 4 cut(s) 1599, 1759, 2280, 2577
BstKTI GATC 6 cut(s) 262, 678, 1543, 1885, 2380, 2812
BstMAI GTCTC 5 cut(s) 195, 391, 1868, 2297, 2439
BstMBI GATC 6 cut(s) 259, 675, 1540, 1882, 2377, 2809
BstMWI GCNNNNNNNGC 9 cut(s) 11, 34, 450, 529, 947, 1127, 1342, 1756, 2574
BstNI CCWGG 6 cut(s) 617, 1046, 1582, 1716, 1871, 1952
BstNSI RCATGY 1 cut(s) 453
BstPAI GACNNNNGTC 1 cut(s) 1161
BstSCI CCNGG 6 cut(s) 615, 1044, 1580, 1714, 1869, 1950
BstSFI CTRYAG 3 cut(s) 248, 639, 818
BstV1I GCAGC 8 cut(s) 262, 293, 544, 625, 1444, 2257, 2260, 2564
BstV2I GAAGAC 2 cut(s) 503, 1043
BstX2I RGATCY 1 cut(s) 1882
BstXI CCANNNNNNTGG 1 cut(s) 1199
BstYI RGATCY 1 cut(s) 1882
Bsu36I CCTNAGG 1 cut(s) 1317
BsuRI GGCC 3 cut(s) 754, 1191, 1585
BtrI CACGTC 1 cut(s) 569
BtsI GCAGTG 1 cut(s) 451
BtsIMutI CAGTG 8 cut(s) 223, 451, 678, 967, 1141, 1432, 1614, 2314
Cac8I GCNNGC 5 cut(s) 39, 436, 451, 545, 752
CciI TCATGA 1 cut(s) 2826
CfoI GCGC 4 cut(s) 1599, 1759, 2280, 2577
CseI GACGC 1 cut(s) 1151
DpnI GATC 6 cut(s) 261, 677, 1542, 1884, 2379, 2811
DpnII GATC 6 cut(s) 259, 675, 1540, 1882, 2377, 2809
DraI TTTAAA 1 cut(s) 2461
DriI GACNNNNNGTC 1 cut(s) 2676
EaeI YGGCCR 1 cut(s) 1189
Eam1104I CTCTTC 4 cut(s) 153, 2217, 2223, 2825
Eam1105I GACNNNNNGTC 1 cut(s) 2676
EarI CTCTTC 4 cut(s) 153, 2217, 2223, 2825
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 2098
Eco130I CCWWGG 4 cut(s) 1152, 1827, 1844, 1878
Eco147I AGGCCT 1 cut(s) 754
Eco24I GRGCYC 1 cut(s) 2100
Eco31I GGTCTC 1 cut(s) 1868
Eco47III AGCGCT 1 cut(s) 2576
Eco53kI GAGCTC 1 cut(s) 2098
Eco57I CTGAAG 4 cut(s) 177, 963, 2199, 2258
Eco81I CCTNAGG 1 cut(s) 1317
EcoICRI GAGCTC 1 cut(s) 2098
EcoRII CCWGG 6 cut(s) 615, 1044, 1580, 1714, 1869, 1950
EcoT14I CCWWGG 4 cut(s) 1152, 1827, 1844, 1878
EcoT22I ATGCAT 2 cut(s) 154, 2525
EcoT38I GRGCYC 1 cut(s) 2100
ErhI CCWWGG 4 cut(s) 1152, 1827, 1844, 1878
FalI AAGNNNNNCTT 2 cut(s) 213, 245
FaqI GGGAC 2 cut(s) 1247, 2526
FauNDI CATATG 1 cut(s) 1338
FbaI TGATCA 1 cut(s) 259
FblI GTMKAC 1 cut(s) 1148
FriOI GRGCYC 1 cut(s) 2100
FspBI CTAG 7 cut(s) 491, 548, 1070, 2108, 2411, 2774, 2817
GlaI GCGC 4 cut(s) 1598, 1758, 2279, 2576
GsuI CTGGAG 6 cut(s) 137, 424, 993, 1737, 1892, 2487
HaeII RGCGCY 2 cut(s) 2281, 2578
HaeIII GGCC 3 cut(s) 754, 1191, 1585
HgaI GACGC 1 cut(s) 1151
HhaI GCGC 4 cut(s) 1599, 1759, 2280, 2577
Hin6I GCGC 4 cut(s) 1597, 1757, 2278, 2575
HinP1I GCGC 4 cut(s) 1597, 1757, 2278, 2575
HincII GTYRAC 1 cut(s) 1789
HindII GTYRAC 1 cut(s) 1789
HindIII AAGCTT 2 cut(s) 35, 1859
HinfI GANTC 9 cut(s) 369, 399, 768, 918, 968, 1013, 1450, 2320, 2671
HphI GGTGA 4 cut(s) 488, 1516, 1843, 2728
Hpy166II GTNNAC 6 cut(s) 391, 1149, 1430, 1789, 2416, 2681
Hpy8I GTNNAC 6 cut(s) 391, 1149, 1430, 1789, 2416, 2681
Hpy99I CGWCG 1 cut(s) 1167
HpyCH4III ACNGT 4 cut(s) 218, 682, 1275, 2298
HpyCH4IV ACGT 4 cut(s) 568, 1942, 2201, 2677
HpyF10VI GCNNNNNNNGC 9 cut(s) 11, 34, 450, 529, 947, 1127, 1342, 1756, 2574
HpySE526I ACGT 4 cut(s) 568, 1942, 2201, 2677
HspAI GCGC 4 cut(s) 1597, 1757, 2278, 2575
KpnI GGTACC 1 cut(s) 1827
Ksp22I TGATCA 1 cut(s) 259
Kzo9I GATC 6 cut(s) 259, 675, 1540, 1882, 2377, 2809
LguI GCTCTTC 1 cut(s) 2825
LmnI GCTCC 5 cut(s) 118, 443, 994, 1202, 2540
Lsp1109I GCAGC 8 cut(s) 262, 293, 544, 625, 1444, 2257, 2260, 2564
LweI GCATC 9 cut(s) 139, 161, 366, 469, 625, 865, 1317, 2510, 2577
MaeI CTAG 7 cut(s) 491, 548, 1070, 2108, 2411, 2774, 2817
MaeII ACGT 4 cut(s) 568, 1942, 2201, 2677
MaeIII GTNAC 5 cut(s) 404, 682, 1681, 1900, 1961
MalI GATC 6 cut(s) 261, 677, 1542, 1884, 2379, 2811
MbiI CCGCTC 1 cut(s) 121
MboI GATC 6 cut(s) 259, 675, 1540, 1882, 2377, 2809
MfeI CAATTG 2 cut(s) 1122, 2175
MflI RGATCY 1 cut(s) 1882
MhlI GDGCHC 1 cut(s) 2100
MlsI TGGCCA 1 cut(s) 1191
MluNI TGGCCA 1 cut(s) 1191
MlyI GAGTC 4 cut(s) 393, 927, 1022, 2665
MmeI TCCRAC 3 cut(s) 1145, 2280, 2834
Mox20I TGGCCA 1 cut(s) 1191
Mph1103I ATGCAT 2 cut(s) 154, 2525
MroXI GAANNNNTTC 5 cut(s) 225, 340, 656, 1040, 2799
MscI TGGCCA 1 cut(s) 1191
MslI CAYNNNNRTG 5 cut(s) 216, 261, 474, 1496, 2528
Msp20I TGGCCA 1 cut(s) 1191
MspA1I CMGCKG 1 cut(s) 535
MspR9I CCNGG 6 cut(s) 617, 1046, 1582, 1716, 1871, 1952
MunI CAATTG 2 cut(s) 1122, 2175
MvaI CCWGG 6 cut(s) 617, 1046, 1582, 1716, 1871, 1952
MwoI GCNNNNNNNGC 9 cut(s) 11, 34, 450, 529, 947, 1127, 1342, 1756, 2574
NdeI CATATG 1 cut(s) 1338
NdeII GATC 6 cut(s) 259, 675, 1540, 1882, 2377, 2809
NlaIV GGNNCC 6 cut(s) 439, 996, 1825, 2083, 2105, 2598
NmeAIII GCCGAG 1 cut(s) 941
NmuCI GTSAC 1 cut(s) 404
NsiI ATGCAT 2 cut(s) 154, 2525
NspI RCATGY 1 cut(s) 453
OliI CACNNNNGTG 1 cut(s) 216
PaeI GCATGC 1 cut(s) 453
PagI TCATGA 1 cut(s) 2826
PceI AGGCCT 1 cut(s) 754
PciSI GCTCTTC 1 cut(s) 2825
PdmI GAANNNNTTC 5 cut(s) 225, 340, 656, 1040, 2799
PfeI GAWTC 5 cut(s) 369, 768, 968, 1450, 2320
PflFI GACNNNGTC 1 cut(s) 402
PflMI CCANNNNNTGG 1 cut(s) 1388
PfoI TCCNGGA 1 cut(s) 1714
PleI GAGTC 4 cut(s) 393, 926, 1021, 2665
PpsI GAGTC 4 cut(s) 393, 926, 1021, 2665
PshAI GACNNNNGTC 1 cut(s) 1161
PshBI ATTAAT 1 cut(s) 2663
Psp124BI GAGCTC 1 cut(s) 2100
Psp6I CCWGG 6 cut(s) 615, 1044, 1580, 1714, 1869, 1950
PspGI CCWGG 6 cut(s) 615, 1044, 1580, 1714, 1869, 1950
PspN4I GGNNCC 6 cut(s) 439, 996, 1825, 2083, 2105, 2598
PstI CTGCAG 3 cut(s) 252, 643, 822
PsuI RGATCY 1 cut(s) 1882
PsyI GACNNNGTC 1 cut(s) 402
PvuII CAGCTG 1 cut(s) 535
RseI CAYNNNNRTG 5 cut(s) 216, 261, 474, 1496, 2528
SacI GAGCTC 1 cut(s) 2100
SapI GCTCTTC 1 cut(s) 2825
Sau3AI GATC 6 cut(s) 259, 675, 1540, 1882, 2377, 2809
ScaI AGTACT 1 cut(s) 1248
SchI GAGTC 4 cut(s) 393, 927, 1022, 2665
ScrFI CCNGG 6 cut(s) 617, 1046, 1582, 1716, 1871, 1952
SduI GDGCHC 1 cut(s) 2100
SfaNI GCATC 9 cut(s) 139, 161, 366, 469, 625, 865, 1317, 2510, 2577
SfcI CTRYAG 3 cut(s) 248, 639, 818
SmiMI CAYNNNNRTG 5 cut(s) 216, 261, 474, 1496, 2528
SmlI CTYRAG 2 cut(s) 364, 2636
SmoI CTYRAG 2 cut(s) 364, 2636
SphI GCATGC 1 cut(s) 453
SseBI AGGCCT 1 cut(s) 754
SsiI CCGC 5 cut(s) 5, 121, 254, 748, 1600
SspMI CTAG 7 cut(s) 491, 548, 1070, 2108, 2411, 2774, 2817
SstI GAGCTC 1 cut(s) 2100
StuI AGGCCT 1 cut(s) 754
StyD4I CCNGG 6 cut(s) 615, 1044, 1580, 1714, 1869, 1950
StyI CCWWGG 4 cut(s) 1152, 1827, 1844, 1878
TaaI ACNGT 4 cut(s) 218, 682, 1275, 2298
TaiI ACGT 4 cut(s) 571, 1945, 2204, 2680
TatI WGTACW 5 cut(s) 1082, 1246, 1630, 2134, 2413
TauI GCSGC 2 cut(s) 256, 1602
TfiI GAWTC 5 cut(s) 369, 768, 968, 1450, 2320
TscAI CASTG 8 cut(s) 223, 451, 685, 967, 1141, 1432, 1614, 2321
TseFI GTSAC 1 cut(s) 404
TseI GCWGC 8 cut(s) 250, 306, 532, 638, 1457, 2245, 2248, 2577
Tsp45I GTSAC 1 cut(s) 404
TspDTI ATGAA 9 cut(s) 249, 716, 794, 1363, 1840, 2047, 2160, 2843, 2853
TspGWI ACGGA 2 cut(s) 392, 882
TspRI CASTG 8 cut(s) 223, 451, 685, 967, 1141, 1432, 1614, 2321
Tth111I GACNNNGTC 1 cut(s) 402
Van91I CCANNNNNTGG 1 cut(s) 1388
VspI ATTAAT 1 cut(s) 2663
XapI RAATTY 3 cut(s) 236, 410, 1967
XbaI TCTAGA 3 cut(s) 490, 1069, 2773
XceI RCATGY 1 cut(s) 453
XcmI CCANNNNNNNNNTGG 1 cut(s) 532
XmiI GTMKAC 1 cut(s) 1148
XmnI GAANNNNTTC 5 cut(s) 225, 340, 656, 1040, 2799
XspI CTAG 7 cut(s) 491, 548, 1070, 2108, 2411, 2774, 2817
ZrmI AGTACT 1 cut(s) 1248
Zsp2I ATGCAT 2 cut(s) 154, 2525
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.