Rorug07G0261200

TIP41-like family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0018202
Physical Location & Seq
Reverse (-)
24583755 .. 24586856
3102 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0261200.1

Sequence Viewer

Length: 2859 bp
ATGGCGGAGAGTGCAGTCAAGTTTCTGCTTGACAAGCTTGCACCCCTTTTTGAAAATGATTTGCAACTTTTGAGAGGAGGGGTTAGGGAAGAAATTGTGTATCTAAGAGGAGAGCTGGAGCGGATGACAGCTTTTCTGAGGGTTGCTGATGCATCTGAAGAGAGTGATGAGGAACTCAAAGTATGGGTTAAGCAACTAAGAGACATTGCTCACGACAGTGAAGATGTTCTTGATGAATTTACACTTCTTCAGGCGCATGATCATGGGGAGGGATTATATGGTTCAATCCATAGGTTATCCTGCTGCATTAAGAACACAAAAGCTCGATACCGAATTGCTTCTGAATTACAAGGCATCAACTTGAGAATCAGAAAAATCTCGGAGGTTCACAGGAGACTCCGTCACAAATTCAATATGGCTGAACAAGGTGCAGGCTCCAGCAGTGCATGCAATACATGGGATGACCATAGAGGTGATGCTCTACTTCTAGAGAAGACTGATATTGTAGGCATTGACAAGCCCATAAAGCAGCTGGTCGGCTGGCTAGTCAAGGGTGATTCTGGACGTGAAGTAGTTTCTGTGGCTGGAATGGGGGGGATGGGGAAAACTACCCTGGTCAAGCAAGTCTATGATGCTGCAGAAGTGAAGAAACATTTCAAAGTTTGTGCTTGGATCACTGTTACTCGGTCTTTCAAACTTGGAGAACTCCTCAAAGACATGGTTCATCAACTCCACAACGCAATCCGCAGGCCTGTTCCAGAAGGAATCAATACCATGAACAACAATCACTTGAAAAAAATAATCAAGGACTTCCTGCAGAAAAGGAGGTATCTCATTGTTTTAGATGATGTATGGCACTTGCACGGATGGGATGCTGTGAAATATGCCTTGCCTAACAATACTTCTGGTAGCCGAGTCATTCTCACTACTCGAAATGCTGAAGTAGCCTCTACAACCAGTGTAGAATCTGGAGGGAAAGTCTACAATTTGGAGCCCTTGCCCCAATCGGAGTCTTGGGAACTTTTATGCAAGAAGACATTCCAGGGGAAATCATGCCCTCCTCATTTAGAGGAAATCTGTACTGATGTTTTAAAGAAGTGTGAGGGGATGCCCCTTGCAATTGTGGCAGTCAGTGGTGTTTTGTCTACCAAGGACAAGCGTCGGATTGATGAGTGGGATATGGTTGGCCATAGTCTTGGAGCTGAAATTGAGGGCAATGACAAACTGAGGGACTTAAAAAAAGTACTTTCTCTCAGTTTCAATGATTTACCGTACTATCTAAAATCTTGCTTCTTGTACCTGAGCATCTTTCCTGAGGATTATCTAATTGAGCATATGAGGCTTGTTCGATTATGGATGGCAGAGGGGTTCGTCGAACCAAAAGATGGCAAAACATTGGAAGATGTTGCAGAGGACTACCTCAGTGAACTACTGAATAGAGGCATGATTCAAGCTGCTGACACAACATCTGATGGAAGGGTCAAGAACATTCGTGTTCATGACCTTTTTCGAGAGATTATCACCTCTAAGATAAGAGATCAGAACTTTGCCACAATATCTAAAGAGCAAAATGTTCCCTGGCCTGATAAAGTGCGCCGCCTGTCAGTGCATAACTCAATGCAATATGTACAGAAAAACAGGTGTGTTTCTCAACTGCGTTCTCTATTTATGTTTAGAGTTGCCGAGAGGCCATTACTACAAAAGTATTTTCCTGGAGGGTTCAGACTTCTTAATGTCTTAGACTTGCAAAATGCACCTCTAAATGTTTTCCCAGTTGAAGTTGTCAACCTTTTCTTTTTGAAGTATCTGAGTTTGAAAGGTACCAAGGTGAAAACCATTCCAAGGTTCATTGGGAAGCTTCAAAACCTGGAGACCTTGGATCTTAAACATTCTCTGGTTACTGAACTCCCAGTTGAAATCTTAAAGCTCGAACATCTACGTCATCTCCTGGTATATCGTTATGAATTTGTACCTTATGGAGATTTTCACTCAAAATATGGTTTCAAGGTACTTGCGAAAATTGGGGTTTTGACATCCCTTCAAAAGCTCTGTTTCATCAAGGCAAACGAAGATGGTGGTGCCATATTAAGAGAGCTCAGGAACCTAGTTCAGTTGAGAAGGTTAGGCATTGTACAGATGAGAAAAGAAGATGGAAAAGTTCTTTGTTCATCAATTGAAAAGCTGAACAAACTTTGCACGTTGTCCATAACTTCAGTAGAAGAGGATGAGATTATTGATTTGCAGCACCTTTCTTCTCCCCCTCTACTGCTTCAGCGCCTCTATTTGCGAGGACGGTTGGAGACAATACCTCACTGGATTCCTTCTCTGCATAGCCTTGTCAGGTTATATTTGAAATGGAGTAGGTTAAAGGATGATCCACTAGTATTCCTTCAATATTTGCCCAATCTAGTACACCTCGAACTTTCTCAGGTGTTTGAAGGAGATACATTATGCTTTGAAGCTGGAGGGTTCAAGAAGCTCAAACATTTGGGTATCGACGAATTTGAGGGACTTAGATGCATACAGGTGCAGTTGGGAGCAATGCCTTCTGTAAAAAAGCTAAGCATCCAGCGCTGCAAGTTATTGGAGAAGGTGCCGTCAGGCATTGAACACCTGAGCAAATTGAAGGTGCTTGAGTTTTTCGATATGCCAGAAACATTAATCAAGACTCTACGTCCACATGAGAAAGACAATGACTATTGGAAAGTTGCACATATCCCCGAAGTTTATTTCACCTACTGGAAAGAGTGTGGATGGGAGGTCTATCCTCTAGAGGGTTTGAGTGAAGGAGAAAACTTTCCTCATGATCAGCCTAGTTCTGTCATGAAGAGCCACGAACTTGAAACTCGTTGGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko04138 map04138
Pfam Domains
Protein Families
TIP41

Protein Analysis

952

Amino Acids

109.39

Weight (kDa)

8.49

Isoelectric Point (pI)

39.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 88 3.6e-22 Rx N-terminal domain
NB-ARC PF00931 172 - 351 1.3e-43 NB-ARC domain
AAA_16 PF13191 175 - 284 2.2e-06 AAA ATPase domain
WHD_DRP PF23559 436 - 507 2.7e-24 Disease resistance protein Winged helix domain
LRR_14 PF23598 551 - 879 3.1e-46 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1820
AccB1I GGYRCC 3 cut(s) 1820, 2078, 2593
AccB7I CCANNNNNTGG 1 cut(s) 1385
AccBSI CCGCTC 1 cut(s) 121
AccI GTMKAC 2 cut(s) 981, 1145
AciI CCGC 4 cut(s) 5, 121, 745, 1597
AclWI GGATC 3 cut(s) 680, 1887, 2369
AcoI YGGCCR 1 cut(s) 1186
AcsI RAATTY 4 cut(s) 236, 407, 1964, 2501
AcuI CTGAAG 5 cut(s) 177, 233, 960, 2196, 2255
AfeI AGCGCT 1 cut(s) 2573
AfiI CCNNNNNNNGG 3 cut(s) 1385, 1842, 2774
AhdI GACNNNNNGTC 1 cut(s) 2673
AhlI ACTAGT 1 cut(s) 2380
AjiI CACGTC 1 cut(s) 566
AjnI CCWGG 6 cut(s) 612, 1041, 1577, 1711, 1866, 1947
AleI CACNNNNGTG 1 cut(s) 216
Alw21I GWGCWC 1 cut(s) 2097
Alw26I GTCTC 4 cut(s) 195, 388, 1865, 2294
AlwI GGATC 3 cut(s) 680, 1887, 2369
Aor51HI AGCGCT 1 cut(s) 2573
AoxI GGCC 4 cut(s) 749, 1186, 1580, 1688
ApeKI GCWGC 6 cut(s) 303, 529, 635, 1454, 2242, 2574
ApoI RAATTY 4 cut(s) 236, 407, 1964, 2501
AseI ATTAAT 1 cut(s) 2660
Asp700I GAANNNNTTC 5 cut(s) 225, 337, 653, 1037, 2796
Asp718I GGTACC 1 cut(s) 1820
AspLEI GCGC 4 cut(s) 256, 1596, 2277, 2574
AsuHPI GGTGA 5 cut(s) 485, 566, 1513, 1840, 2725
AxyI CCTNAGG 1 cut(s) 1314
BaeI ACNNNNGTAYC 2 cut(s) 1812, 1845
BalI TGGCCA 1 cut(s) 1188
BanI GGYRCC 3 cut(s) 1820, 2078, 2593
BanII GRGCYC 2 cut(s) 996, 2097
BbsI GAAGAC 2 cut(s) 500, 1040
Bbv12I GWGCWC 1 cut(s) 2097
BbvI GCAGC 6 cut(s) 290, 541, 622, 1441, 2254, 2561
BccI CCATC 8 cut(s) 592, 861, 1351, 1379, 1466, 2066, 2144, 2748
BceAI ACGGC 1 cut(s) 2581
BciT130I CCWGG 6 cut(s) 614, 1043, 1579, 1713, 1868, 1949
BclI TGATCA 2 cut(s) 259, 2806
BcoDI GTCTC 4 cut(s) 195, 388, 1865, 2294
BcuI ACTAGT 1 cut(s) 2380
BfaI CTAG 7 cut(s) 488, 545, 2105, 2381, 2408, 2771, 2814
BfmI CTRYAG 2 cut(s) 636, 815
BfoI RGCGCY 2 cut(s) 2278, 2575
BisI GCNGC 7 cut(s) 304, 530, 636, 1455, 1597, 2243, 2575
BlpI GCTNAGC 1 cut(s) 2561
BlsI GCNGC 7 cut(s) 305, 531, 637, 1456, 1598, 2244, 2576
BmcAI AGTACT 1 cut(s) 1245
Bme1390I CCNGG 6 cut(s) 614, 1043, 1579, 1713, 1868, 1949
BmeRI GACNNNNNGTC 1 cut(s) 2673
BmgBI CACGTC 1 cut(s) 566
BmiI GGNNCC 6 cut(s) 436, 993, 1822, 2080, 2102, 2595
BmrFI CCNGG 6 cut(s) 614, 1043, 1579, 1713, 1868, 1949
BmrI ACTGGG 2 cut(s) 1766, 1904
BmuI ACTGGG 2 cut(s) 1766, 1904
BoxI GACNNNNGTC 1 cut(s) 1158
BpiI GAAGAC 2 cut(s) 500, 1040
BplI GAGNNNNNCTC 4 cut(s) 693, 725, 906, 938
BpmI CTGGAG 6 cut(s) 137, 421, 990, 1734, 1889, 2484
Bpu10I CCTNAGC 3 cut(s) 1301, 2096, 2615
Bpu1102I GCTNAGC 1 cut(s) 2561
BpuEI CTTGAG 2 cut(s) 382, 2654
BsaI GGTCTC 1 cut(s) 1865
BsaJI CCNNGG 7 cut(s) 612, 1042, 1149, 1577, 1824, 1841, 1875
BsaXI ACNNNNNCTCC 6 cut(s) 385, 415, 963, 993, 1929, 1959
Bsc4I CCNNNNNNNGG 3 cut(s) 1385, 1842, 2774
Bse1I ACTGG 5 cut(s) 957, 1772, 1910, 2318, 2744
Bse21I CCTNAGG 1 cut(s) 1314
Bse3DI GCAATG 3 cut(s) 204, 1222, 2547
BseBI CCWGG 6 cut(s) 614, 1043, 1579, 1713, 1868, 1949
BseDI CCNNGG 7 cut(s) 612, 1042, 1149, 1577, 1824, 1841, 1875
BseLI CCNNNNNNNGG 3 cut(s) 1385, 1842, 2774
BseMI GCAATG 3 cut(s) 204, 1222, 2547
BseNI ACTGG 5 cut(s) 957, 1772, 1910, 2318, 2744
BseRI GAGGAG 4 cut(s) 90, 123, 698, 1050
BseXI GCAGC 6 cut(s) 290, 541, 622, 1441, 2254, 2561
BsgI GTGCAG 3 cut(s) 33, 450, 2549
BshFI GGCC 4 cut(s) 751, 1188, 1582, 1690
BshNI GGYRCC 3 cut(s) 1820, 2078, 2593
BsiHKAI GWGCWC 1 cut(s) 2097
BslFI GGGAC 2 cut(s) 1244, 2523
BslI CCNNNNNNNGG 3 cut(s) 1385, 1842, 2774
BsmAI GTCTC 4 cut(s) 195, 388, 1865, 2294
BsmFI GGGAC 2 cut(s) 1244, 2523
BsnI GGCC 4 cut(s) 751, 1188, 1582, 1690
Bso31I GGTCTC 1 cut(s) 1865
Bsp1286I GDGCHC 2 cut(s) 996, 2097
Bsp1407I TGTACA 2 cut(s) 1627, 2131
Bsp143I GATC 6 cut(s) 259, 672, 1537, 1879, 2374, 2806
Bsp1720I GCTNAGC 1 cut(s) 2561
BspACI CCGC 4 cut(s) 5, 121, 745, 1597
BspANI GGCC 4 cut(s) 751, 1188, 1582, 1690
BspHI TCATGA 3 cut(s) 1498, 2803, 2823
BspLI GGNNCC 6 cut(s) 436, 993, 1822, 2080, 2102, 2595
BspMAI CTGCAG 2 cut(s) 640, 819
BspPI GGATC 3 cut(s) 680, 1887, 2369
BspQI GCTCTTC 1 cut(s) 2822
BspT107I GGYRCC 3 cut(s) 1820, 2078, 2593
BspTNI GGTCTC 1 cut(s) 1865
BsrBI CCGCTC 1 cut(s) 121
BsrDI GCAATG 3 cut(s) 204, 1222, 2547
BsrGI TGTACA 2 cut(s) 1627, 2131
BsrI ACTGG 5 cut(s) 957, 1772, 1910, 2318, 2744
BssECI CCNNGG 7 cut(s) 612, 1042, 1149, 1577, 1824, 1841, 1875
BssMI GATC 6 cut(s) 259, 672, 1537, 1879, 2374, 2806
BssT1I CCWWGG 4 cut(s) 1149, 1824, 1841, 1875
Bst2UI CCWGG 6 cut(s) 614, 1043, 1579, 1713, 1868, 1949
Bst4CI ACNGT 4 cut(s) 218, 679, 1272, 2295
Bst6I CTCTTC 3 cut(s) 153, 2214, 2822
BstAPI GCANNNNNTGC 1 cut(s) 447
BstAUI TGTACA 2 cut(s) 1627, 2131
BstC8I GCNNGC 5 cut(s) 39, 433, 448, 542, 749
BstH2I RGCGCY 2 cut(s) 2278, 2575
BstHHI GCGC 4 cut(s) 256, 1596, 2277, 2574
BstKTI GATC 6 cut(s) 262, 675, 1540, 1882, 2377, 2809
BstMAI GTCTC 4 cut(s) 195, 388, 1865, 2294
BstMBI GATC 6 cut(s) 259, 672, 1537, 1879, 2374, 2806
BstMWI GCNNNNNNNGC 8 cut(s) 11, 34, 447, 526, 944, 1124, 1339, 2571
BstNI CCWGG 6 cut(s) 614, 1043, 1579, 1713, 1868, 1949
BstNSI RCATGY 1 cut(s) 450
BstPAI GACNNNNGTC 1 cut(s) 1158
BstSCI CCNGG 6 cut(s) 612, 1041, 1577, 1711, 1866, 1947
BstSFI CTRYAG 2 cut(s) 636, 815
BstV1I GCAGC 6 cut(s) 290, 541, 622, 1441, 2254, 2561
BstV2I GAAGAC 2 cut(s) 500, 1040
BstX2I RGATCY 1 cut(s) 1879
BstXI CCANNNNNNTGG 1 cut(s) 1196
BstYI RGATCY 1 cut(s) 1879
Bsu36I CCTNAGG 1 cut(s) 1314
BsuRI GGCC 4 cut(s) 751, 1188, 1582, 1690
BtrI CACGTC 1 cut(s) 566
BtsI GCAGTG 1 cut(s) 448
BtsIMutI CAGTG 8 cut(s) 223, 448, 675, 964, 1138, 1429, 1611, 2311
Cac8I GCNNGC 5 cut(s) 39, 433, 448, 542, 749
CciI TCATGA 3 cut(s) 1498, 2803, 2823
CfoI GCGC 4 cut(s) 256, 1596, 2277, 2574
CseI GACGC 1 cut(s) 1148
DpnI GATC 6 cut(s) 261, 674, 1539, 1881, 2376, 2808
DpnII GATC 6 cut(s) 259, 672, 1537, 1879, 2374, 2806
DraI TTTAAA 1 cut(s) 1092
DriI GACNNNNNGTC 1 cut(s) 2673
EaeI YGGCCR 1 cut(s) 1186
Eam1104I CTCTTC 3 cut(s) 153, 2214, 2822
Eam1105I GACNNNNNGTC 1 cut(s) 2673
EarI CTCTTC 3 cut(s) 153, 2214, 2822
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 2095
Eco130I CCWWGG 4 cut(s) 1149, 1824, 1841, 1875
Eco147I AGGCCT 1 cut(s) 751
Eco24I GRGCYC 2 cut(s) 996, 2097
Eco31I GGTCTC 1 cut(s) 1865
Eco47III AGCGCT 1 cut(s) 2573
Eco53kI GAGCTC 1 cut(s) 2095
Eco57I CTGAAG 5 cut(s) 177, 233, 960, 2196, 2255
Eco81I CCTNAGG 1 cut(s) 1314
EcoICRI GAGCTC 1 cut(s) 2095
EcoRII CCWGG 6 cut(s) 612, 1041, 1577, 1711, 1866, 1947
EcoT14I CCWWGG 4 cut(s) 1149, 1824, 1841, 1875
EcoT22I ATGCAT 2 cut(s) 154, 2522
EcoT38I GRGCYC 2 cut(s) 996, 2097
ErhI CCWWGG 4 cut(s) 1149, 1824, 1841, 1875
FalI AAGNNNNNCTT 2 cut(s) 213, 245
FaqI GGGAC 2 cut(s) 1244, 2523
FauNDI CATATG 1 cut(s) 1335
FbaI TGATCA 2 cut(s) 259, 2806
FblI GTMKAC 2 cut(s) 981, 1145
Fnu4HI GCNGC 7 cut(s) 304, 530, 636, 1455, 1597, 2243, 2575
FriOI GRGCYC 2 cut(s) 996, 2097
Fsp4HI GCNGC 7 cut(s) 304, 530, 636, 1455, 1597, 2243, 2575
FspBI CTAG 7 cut(s) 488, 545, 2105, 2381, 2408, 2771, 2814
GlaI GCGC 4 cut(s) 255, 1595, 2276, 2573
GluI GCNGC 7 cut(s) 304, 530, 636, 1455, 1597, 2243, 2575
GsuI CTGGAG 6 cut(s) 137, 421, 990, 1734, 1889, 2484
HaeII RGCGCY 2 cut(s) 2278, 2575
HaeIII GGCC 4 cut(s) 751, 1188, 1582, 1690
HgaI GACGC 1 cut(s) 1148
HhaI GCGC 4 cut(s) 256, 1596, 2277, 2574
Hin6I GCGC 4 cut(s) 254, 1594, 2275, 2572
HinP1I GCGC 4 cut(s) 254, 1594, 2275, 2572
HincII GTYRAC 1 cut(s) 1786
HindII GTYRAC 1 cut(s) 1786
HindIII AAGCTT 2 cut(s) 35, 1856
HphI GGTGA 5 cut(s) 485, 566, 1513, 1840, 2725
Hpy166II GTNNAC 7 cut(s) 388, 982, 1146, 1427, 1786, 2413, 2678
Hpy8I GTNNAC 7 cut(s) 388, 982, 1146, 1427, 1786, 2413, 2678
Hpy99I CGWCG 3 cut(s) 1164, 1376, 2501
HpyCH4III ACNGT 4 cut(s) 218, 679, 1272, 2295
HpyCH4IV ACGT 4 cut(s) 565, 1939, 2198, 2674
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 34, 447, 526, 944, 1124, 1339, 2571
HpySE526I ACGT 4 cut(s) 565, 1939, 2198, 2674
HspAI GCGC 4 cut(s) 254, 1594, 2275, 2572
KpnI GGTACC 1 cut(s) 1824
Ksp22I TGATCA 2 cut(s) 259, 2806
Kzo9I GATC 6 cut(s) 259, 672, 1537, 1879, 2374, 2806
LguI GCTCTTC 1 cut(s) 2822
LmnI GCTCC 5 cut(s) 118, 440, 991, 1199, 2537
Lsp1109I GCAGC 6 cut(s) 290, 541, 622, 1441, 2254, 2561
MaeI CTAG 7 cut(s) 488, 545, 2105, 2381, 2408, 2771, 2814
MaeII ACGT 4 cut(s) 565, 1939, 2198, 2674
MaeIII GTNAC 3 cut(s) 401, 679, 1897
MalI GATC 6 cut(s) 261, 674, 1539, 1881, 2376, 2808
MbiI CCGCTC 1 cut(s) 121
MboI GATC 6 cut(s) 259, 672, 1537, 1879, 2374, 2806
MfeI CAATTG 2 cut(s) 1119, 2172
MflI RGATCY 1 cut(s) 1879
MhlI GDGCHC 2 cut(s) 996, 2097
MlsI TGGCCA 1 cut(s) 1188
MluNI TGGCCA 1 cut(s) 1188
MlyI GAGTC 4 cut(s) 390, 924, 1019, 2662
MmeI TCCRAC 3 cut(s) 1142, 2277, 2831
Mox20I TGGCCA 1 cut(s) 1188
Mph1103I ATGCAT 2 cut(s) 154, 2522
MroXI GAANNNNTTC 5 cut(s) 225, 337, 653, 1037, 2796
MscI TGGCCA 1 cut(s) 1188
MslI CAYNNNNRTG 4 cut(s) 216, 261, 471, 2525
Msp20I TGGCCA 1 cut(s) 1188
MspA1I CMGCKG 1 cut(s) 532
MspR9I CCNGG 6 cut(s) 614, 1043, 1579, 1713, 1868, 1949
MunI CAATTG 2 cut(s) 1119, 2172
MvaI CCWGG 6 cut(s) 614, 1043, 1579, 1713, 1868, 1949
MwoI GCNNNNNNNGC 8 cut(s) 11, 34, 447, 526, 944, 1124, 1339, 2571
NdeI CATATG 1 cut(s) 1335
NdeII GATC 6 cut(s) 259, 672, 1537, 1879, 2374, 2806
NlaIV GGNNCC 6 cut(s) 436, 993, 1822, 2080, 2102, 2595
NmeAIII GCCGAG 2 cut(s) 938, 1708
NmuCI GTSAC 1 cut(s) 401
NsiI ATGCAT 2 cut(s) 154, 2522
NspI RCATGY 1 cut(s) 450
OliI CACNNNNGTG 1 cut(s) 216
PaeI GCATGC 1 cut(s) 450
PagI TCATGA 3 cut(s) 1498, 2803, 2823
PceI AGGCCT 1 cut(s) 751
PciSI GCTCTTC 1 cut(s) 2822
PdmI GAANNNNTTC 5 cut(s) 225, 337, 653, 1037, 2796
PfeI GAWTC 6 cut(s) 366, 557, 765, 965, 1447, 2317
PflFI GACNNNGTC 1 cut(s) 399
PflMI CCANNNNNTGG 1 cut(s) 1385
PfoI TCCNGGA 1 cut(s) 1711
PkrI GCNGC 7 cut(s) 305, 531, 637, 1456, 1598, 2244, 2576
PleI GAGTC 4 cut(s) 390, 923, 1018, 2662
PpsI GAGTC 4 cut(s) 390, 923, 1018, 2662
PshAI GACNNNNGTC 1 cut(s) 1158
PshBI ATTAAT 1 cut(s) 2660
Psp124BI GAGCTC 1 cut(s) 2097
Psp6I CCWGG 6 cut(s) 612, 1041, 1577, 1711, 1866, 1947
PspGI CCWGG 6 cut(s) 612, 1041, 1577, 1711, 1866, 1947
PspN4I GGNNCC 6 cut(s) 436, 993, 1822, 2080, 2102, 2595
PstI CTGCAG 2 cut(s) 640, 819
PsuI RGATCY 1 cut(s) 1879
PsyI GACNNNGTC 1 cut(s) 399
PvuII CAGCTG 1 cut(s) 532
RseI CAYNNNNRTG 4 cut(s) 216, 261, 471, 2525
SacI GAGCTC 1 cut(s) 2097
SapI GCTCTTC 1 cut(s) 2822
SatI GCNGC 7 cut(s) 304, 530, 636, 1455, 1597, 2243, 2575
Sau3AI GATC 6 cut(s) 259, 672, 1537, 1879, 2374, 2806
ScaI AGTACT 1 cut(s) 1245
SchI GAGTC 4 cut(s) 390, 924, 1019, 2662
ScrFI CCNGG 6 cut(s) 614, 1043, 1579, 1713, 1868, 1949
SduI GDGCHC 2 cut(s) 996, 2097
SfcI CTRYAG 2 cut(s) 636, 815
SmiMI CAYNNNNRTG 4 cut(s) 216, 261, 471, 2525
SmlI CTYRAG 2 cut(s) 361, 2633
SmoI CTYRAG 2 cut(s) 361, 2633
SpeI ACTAGT 1 cut(s) 2380
SphI GCATGC 1 cut(s) 450
SseBI AGGCCT 1 cut(s) 751
SsiI CCGC 4 cut(s) 5, 121, 745, 1597
SspI AATATT 1 cut(s) 2396
SspMI CTAG 7 cut(s) 488, 545, 2105, 2381, 2408, 2771, 2814
SstI GAGCTC 1 cut(s) 2097
StuI AGGCCT 1 cut(s) 751
StyD4I CCNGG 6 cut(s) 612, 1041, 1577, 1711, 1866, 1947
StyI CCWWGG 4 cut(s) 1149, 1824, 1841, 1875
TaaI ACNGT 4 cut(s) 218, 679, 1272, 2295
TaiI ACGT 4 cut(s) 568, 1942, 2201, 2677
TaqI TCGA 9 cut(s) 325, 931, 1348, 1374, 1510, 1929, 2418, 2496, 2643
TaqII GACCGA 1 cut(s) 675
TatI WGTACW 5 cut(s) 1079, 1243, 1627, 2131, 2410
TauI GCSGC 1 cut(s) 1599
TfiI GAWTC 6 cut(s) 366, 557, 765, 965, 1447, 2317
TscAI CASTG 8 cut(s) 223, 448, 682, 964, 1138, 1429, 1611, 2318
TseFI GTSAC 1 cut(s) 401
TseI GCWGC 6 cut(s) 303, 529, 635, 1454, 2242, 2574
Tsp45I GTSAC 1 cut(s) 401
TspDTI ATGAA 9 cut(s) 249, 713, 791, 1487, 1837, 1977, 2044, 2157, 2840
TspGWI ACGGA 2 cut(s) 389, 879
TspRI CASTG 8 cut(s) 223, 448, 682, 964, 1138, 1429, 1611, 2318
Tth111I GACNNNGTC 1 cut(s) 399
Van91I CCANNNNNTGG 1 cut(s) 1385
VspI ATTAAT 1 cut(s) 2660
XapI RAATTY 4 cut(s) 236, 407, 1964, 2501
XbaI TCTAGA 2 cut(s) 487, 2770
XceI RCATGY 1 cut(s) 450
XcmI CCANNNNNNNNNTGG 1 cut(s) 529
XmiI GTMKAC 2 cut(s) 981, 1145
XmnI GAANNNNTTC 5 cut(s) 225, 337, 653, 1037, 2796
XspI CTAG 7 cut(s) 488, 545, 2105, 2381, 2408, 2771, 2814
ZrmI AGTACT 1 cut(s) 1245
Zsp2I ATGCAT 2 cut(s) 154, 2522
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.