Rorug07G0289100

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0016190
Physical Location & Seq
Forward (+)
28138072 .. 28141119
3048 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0289100.1

Sequence Viewer

Length: 1572 bp
ATGGCGCTAAAGGTGCTTTCCGCCCTTGACACGGCGAAGACGCAATGGTACCACTTCAAGGCCATCATCATCGCCGGCATGGGCCTCTTCACCGACGCCTACGACCTCTTCTGTATCCCTCCCATCATGAGACTCCTCGGCCGCATATACTACAACAAACGTAAACCAAACGACATAGTATTCGACAACAACGACAACAACTTCGTAATCCCGGCGCTAGTCGTTACGGCGCTGGTGGGCTTCCCTCTCCTCGGCACTGTCCTGGGGCAGCTGCTCTTCGGCAGGCTTGGGGACCTAGTCGGTAGGAGACGTGTCTACGGGCTTTCGCTGATGGTGATGGTGCTGAGCTCCATAGGGTGCGGCTTCTCCATCTGCACCTCCCCCACCTGCGTCCTAGTCAGCCTCGTCTTCTTTCGGCTCCTCCTCGGCGTCGGCATCGGCGGAGACTACCCCCTCTCGGCGACCATCATGTCGGAGTTTGCCAACAAGAGGACACGTGGCTCGTTCATAGCGGCTGTGTTCTCCATGCAAGGGTTTGGGATTCTGGCGAGCTCTATAGTGACCATCGTGGTGTGCGCCGTCTTTAACTTTGCGAGCAAGCCGGATCCGAAGAAAGCGACGCCGGACGAGGCTGACATAGCGTGGAGGTTGATACTCATGCTCGGTGCAATTCCGGCTGCCATGACGTACTATTGGCGGATGATGATGCCTGAAACTGCCAGGTATACAGCACTGGTTGAGCTAAATGTGGTGCAAGCAGCCAAGGATATGGAGAAAGTGTTGGCTGTTTCCTTGAGTCAAATTGCAGAAGATGAACCAGATTTACTATCAGTAGGACAAAACCCTGCATCATCATATCCCTTCTTCTCCAAGGAATTTTTACGTCTCCATGGCCGCGATCTCTTCTCTTGTGCTGCCAACTGGTTTCTTGTTGATGTTGTCTTCTACAGCAGCAACCTATTCCAGTCTCAAATATATAGAAGATATATCGACAAAAAATACCCAAAATACAATGTTAATCTCTACCAAGATGCTTTGCATGTTGCTGAGTTGCAAGCAATTGTTACAATATGCTCAACAATTCCAGGATATTGGTTCAGTGTCTTCTTCATTGATCGAATTGGAAGGCGAAAAATTCAAATGATGGGGTTTTTCGTCATGGCACTTGTTTATTTCTCGATTGGGATACCCTACAAAACTCACTGGGCAAAAAATACAGATGTAGGTTTCATGGTCCTCTATGGCCTCACTTTCTTCTTTGCAAATTTTGGACCAAATACTACTACATTTATAGTGCCTGCTGAGCTTTTCCCGGCGAGGTTTAGGTCAACTTGTCATGGGATTTCTGGAGCGTCGGGGAAGGTTGGCGCCTTGATCGGATCAATTGGATTTCTATGGGCTGCACATGGTCAAAACGAGGAGGATAAAAAGACGAGAATCGAGAGGTCGTTGATTGGTTTAGGTGTAGTTTGTATTCTGGGATTGGTGGTAACGCATTTCTTCACACCTGAAACTACGGGAAGATCACTAGAAGAGAATGAGAATGAGAATGGAAATGAACAACATGCATGA

Protein Analysis

523

Amino Acids

58.17

Weight (kDa)

8.71

Isoelectric Point (pI)

27.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 23 - 514 1e-46 Sugar (and other) transporter
MFS_1 PF07690 68 - 460 1.3e-26 Major Facilitator Superfamily
MFS_1 PF07690 348 - 507 2.8e-06 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016190)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31060
fragaria_vesca FvH4_5g34550
malus_domestica MD04G1001700.v1.1
prunus_persica Prupe.1G001700_v2.0.a1
pyrus_communis pycom04g00230
rosa_chinensis RchiOBHm_Chr7g0235201
rosa_laevigata RLG00000001173
rosa_multiflora Rmu_sc0003211.1_g000026 Rmu_sc0004657.1_g000024
rosa_roxburghii Rroxscaffold_3G00226180
rosa_rugosa Rorug07G0289100
rosa_samantha Rh7AG443600 Rh7CG464800 Rh7DG433100
rosa_wichuraiana Rw7G036880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 395
AasI GACNNNNNNGTC 1 cut(s) 469
Acc36I ACCTGC 1 cut(s) 395
Acc65I GGTACC 1 cut(s) 48
AccB1I GGYRCC 2 cut(s) 48, 1367
AccI GTMKAC 2 cut(s) 315, 725
AccII CGCG 1 cut(s) 897
AciI CCGC 7 cut(s) 21, 142, 360, 441, 512, 697, 895
AclWI GGATC 3 cut(s) 599, 612, 1387
AcoI YGGCCR 2 cut(s) 139, 892
AcsI RAATTY 3 cut(s) 875, 1134, 1264
AcvI CACGTG 1 cut(s) 497
AcyI GRCGYC 4 cut(s) 96, 429, 620, 1368
AfaI GTAC 2 cut(s) 50, 689
AfiI CCNNNNNNNGG 6 cut(s) 31, 58, 251, 457, 489, 531
AflIII ACRYGT 2 cut(s) 310, 494
AgsI TTSAA 2 cut(s) 58, 1139
AjiI CACGTC 1 cut(s) 311
AjnI CCWGG 3 cut(s) 261, 719, 1084
AluBI AGCT 5 cut(s) 271, 348, 552, 742, 1306
AluI AGCT 5 cut(s) 271, 348, 552, 742, 1306
Alw21I GWGCWC 2 cut(s) 350, 554
Alw26I GTCTC 5 cut(s) 124, 301, 438, 890, 972
AlwI GGATC 3 cut(s) 599, 612, 1387
AoxI GGCC 5 cut(s) 60, 82, 139, 892, 1243
ApeKI GCWGC 7 cut(s) 268, 271, 677, 758, 914, 951, 1400
ApoI RAATTY 3 cut(s) 875, 1134, 1264
ArsI GACNNNNNNTTYG 4 cut(s) 164, 185, 196, 217
Asp718I GGTACC 1 cut(s) 48
AspLEI GCGC 5 cut(s) 7, 217, 232, 578, 1370
AspS9I GGNCC 4 cut(s) 82, 292, 1234, 1271
AsuC2I CCSGG 2 cut(s) 212, 1313
AsuHPI GGTGA 2 cut(s) 82, 346
AvaII GGWCC 3 cut(s) 292, 1234, 1271
BamHI GGATCC 1 cut(s) 604
BanI GGYRCC 2 cut(s) 48, 1367
BanII GRGCYC 2 cut(s) 350, 554
BbrPI CACGTG 1 cut(s) 497
BbsI GAAGAC 4 cut(s) 44, 400, 934, 1096
Bbv12I GWGCWC 2 cut(s) 350, 554
BbvI GCAGC 7 cut(s) 258, 280, 664, 770, 901, 963, 1387
BccI CCATC 8 cut(s) 71, 131, 325, 331, 377, 473, 572, 1138
BceAI ACGGC 3 cut(s) 48, 243, 563
BciT130I CCWGG 3 cut(s) 263, 721, 1086
BciVI GTATCC 2 cut(s) 125, 1179
BcnI CCSGG 2 cut(s) 212, 1313
BcoDI GTCTC 5 cut(s) 124, 301, 438, 890, 972
BfaI CTAG 4 cut(s) 218, 296, 395, 1529
BfmI CTRYAG 2 cut(s) 555, 946
BfoI RGCGCY 4 cut(s) 8, 218, 233, 1371
BfuAI ACCTGC 1 cut(s) 395
BfuI GTATCC 2 cut(s) 125, 1179
BlpI GCTNAGC 2 cut(s) 344, 1302
Bme1390I CCNGG 5 cut(s) 212, 263, 721, 1086, 1313
Bme18I GGWCC 3 cut(s) 292, 1234, 1271
BmgBI CACGTC 1 cut(s) 311
BmgT120I GGNCC 4 cut(s) 82, 292, 1234, 1271
BmiI GGNNCC 5 cut(s) 50, 293, 419, 606, 1369
BmrFI CCNGG 5 cut(s) 212, 263, 721, 1086, 1313
BmrI ACTGGG 1 cut(s) 1213
BmsI GCATC 4 cut(s) 444, 696, 857, 1021
BmuI ACTGGG 1 cut(s) 1213
BpiI GAAGAC 4 cut(s) 44, 400, 934, 1096
BpmI CTGGAG 1 cut(s) 1368
Bpu1102I GCTNAGC 2 cut(s) 344, 1302
BpuEI CTTGAG 1 cut(s) 814
BpuMI CCSGG 2 cut(s) 212, 1313
BsaAI YACGTR 1 cut(s) 497
BsaHI GRCGYC 4 cut(s) 96, 429, 620, 1368
BsaJI CCNNGG 7 cut(s) 136, 250, 262, 424, 762, 870, 889
BsaXI ACNNNNNCTCC 2 cut(s) 764, 794
Bsc4I CCNNNNNNNGG 6 cut(s) 31, 58, 251, 457, 489, 531
Bse118I RCCGGY 1 cut(s) 74
Bse1I ACTGG 4 cut(s) 738, 926, 964, 1208
Bse3DI GCAATG 1 cut(s) 50
BseBI CCWGG 3 cut(s) 263, 721, 1086
BseDI CCNNGG 7 cut(s) 136, 250, 262, 424, 762, 870, 889
BseGI GGATG 1 cut(s) 705
BseLI CCNNNNNNNGG 6 cut(s) 31, 58, 251, 457, 489, 531
BseMI GCAATG 1 cut(s) 50
BseMII CTCAG 3 cut(s) 335, 1038, 1293
BseNI ACTGG 4 cut(s) 738, 926, 964, 1208
BseRI GAGGAG 5 cut(s) 125, 239, 410, 413, 1433
BseX3I CGGCCG 1 cut(s) 139
BseXI GCAGC 7 cut(s) 258, 280, 664, 770, 901, 963, 1387
BsgI GTGCAG 2 cut(s) 358, 1386
Bsh1236I CGCG 1 cut(s) 897
Bsh1285I CGRYCG 1 cut(s) 142
BshFI GGCC 5 cut(s) 62, 84, 141, 894, 1245
BshNI GGYRCC 2 cut(s) 48, 1367
BsiEI CGRYCG 1 cut(s) 142
BsiHKAI GWGCWC 2 cut(s) 350, 554
BsiSI CCGG 6 cut(s) 75, 212, 602, 623, 674, 1313
BslFI GGGAC 1 cut(s) 305
BslI CCNNNNNNNGG 6 cut(s) 31, 58, 251, 457, 489, 531
BsmAI GTCTC 5 cut(s) 124, 301, 438, 890, 972
BsmBI CGTCTC 2 cut(s) 301, 890
BsmFI GGGAC 1 cut(s) 305
BsnI GGCC 5 cut(s) 62, 84, 141, 894, 1245
Bsp1286I GDGCHC 2 cut(s) 350, 554
Bsp143I GATC 6 cut(s) 604, 898, 1114, 1374, 1379, 1523
Bsp1720I GCTNAGC 2 cut(s) 344, 1302
Bsp19I CCATGG 1 cut(s) 889
BspACI CCGC 7 cut(s) 21, 142, 360, 441, 512, 697, 895
BspANI GGCC 5 cut(s) 62, 84, 141, 894, 1245
BspCNI CTCAG 3 cut(s) 336, 1039, 1294
BspFNI CGCG 1 cut(s) 897
BspHI TCATGA 1 cut(s) 126
BspLI GGNNCC 5 cut(s) 50, 293, 419, 606, 1369
BspMI ACCTGC 1 cut(s) 395
BspPI GGATC 3 cut(s) 599, 612, 1387
BspQI GCTCTTC 1 cut(s) 281
BspT107I GGYRCC 2 cut(s) 48, 1367
BsrDI GCAATG 1 cut(s) 50
BsrFI RCCGGY 1 cut(s) 74
BsrI ACTGG 4 cut(s) 738, 926, 964, 1208
BssAI RCCGGY 1 cut(s) 74
BssECI CCNNGG 7 cut(s) 136, 250, 262, 424, 762, 870, 889
BssMI GATC 6 cut(s) 604, 898, 1114, 1374, 1379, 1523
BssNAI GTATAC 1 cut(s) 726
BssNI GRCGYC 4 cut(s) 96, 429, 620, 1368
BssT1I CCWWGG 3 cut(s) 762, 870, 889
Bst1107I GTATAC 1 cut(s) 726
Bst2UI CCWGG 3 cut(s) 263, 721, 1086
Bst4CI ACNGT 1 cut(s) 259
Bst6I CTCTTC 5 cut(s) 92, 113, 281, 908, 1527
BstACI GRCGYC 4 cut(s) 96, 429, 620, 1368
BstBAI YACGTR 1 cut(s) 497
BstC8I GCNNGC 8 cut(s) 76, 284, 550, 595, 599, 756, 1056, 1299
BstDEI CTNAG 3 cut(s) 344, 1047, 1302
BstDSI CCRYGG 1 cut(s) 889
BstF5I GGATG 1 cut(s) 705
BstFNI CGCG 1 cut(s) 897
BstH2I RGCGCY 4 cut(s) 8, 218, 233, 1371
BstHHI GCGC 5 cut(s) 7, 217, 232, 578, 1370
BstKTI GATC 6 cut(s) 607, 901, 1117, 1377, 1382, 1526
BstMAI GTCTC 5 cut(s) 124, 301, 438, 890, 972
BstMBI GATC 6 cut(s) 604, 898, 1114, 1374, 1379, 1523
BstMCI CGRYCG 1 cut(s) 142
BstMWI GCNNNNNNNGC 4 cut(s) 13, 638, 674, 1303
BstNI CCWGG 3 cut(s) 263, 721, 1086
BstNSI RCATGY 2 cut(s) 1043, 1568
BstSCI CCNGG 5 cut(s) 210, 261, 719, 1084, 1311
BstSFI CTRYAG 2 cut(s) 555, 946
BstUI CGCG 1 cut(s) 897
BstV1I GCAGC 7 cut(s) 258, 280, 664, 770, 901, 963, 1387
BstV2I GAAGAC 4 cut(s) 44, 400, 934, 1096
BstX2I RGATCY 1 cut(s) 604
BstXI CCANNNNNNTGG 2 cut(s) 769, 1092
BstYI RGATCY 1 cut(s) 604
BstZ17I GTATAC 1 cut(s) 726
BstZI CGGCCG 1 cut(s) 139
BsuI GTATCC 2 cut(s) 125, 1179
BsuRI GGCC 5 cut(s) 62, 84, 141, 894, 1245
BtgI CCRYGG 1 cut(s) 889
BtgZI GCGATG 1 cut(s) 55
BtrI CACGTC 1 cut(s) 311
BtsCI GGATG 1 cut(s) 705
BtsIMutI CAGTG 4 cut(s) 255, 731, 1105, 1201
BveI ACCTGC 1 cut(s) 395
Cac8I GCNNGC 8 cut(s) 76, 284, 550, 595, 599, 756, 1056, 1299
CciI TCATGA 1 cut(s) 126
CfoI GCGC 5 cut(s) 7, 217, 232, 578, 1370
Cfr10I RCCGGY 1 cut(s) 74
Cfr13I GGNCC 4 cut(s) 82, 292, 1234, 1271
CseI GACGC 6 cut(s) 49, 104, 379, 418, 628, 1341
Csp6I GTAC 2 cut(s) 49, 688
CviQI GTAC 2 cut(s) 49, 688
DdeI CTNAG 3 cut(s) 344, 1047, 1302
DinI GGCGCC 1 cut(s) 1369
DpnI GATC 6 cut(s) 606, 900, 1116, 1376, 1381, 1525
DpnII GATC 6 cut(s) 604, 898, 1114, 1374, 1379, 1523
DrdI GACNNNNNNGTC 1 cut(s) 469
DseDI GACNNNNNNGTC 1 cut(s) 469
EaeI YGGCCR 2 cut(s) 139, 892
EagI CGGCCG 1 cut(s) 139
Eam1104I CTCTTC 5 cut(s) 92, 113, 281, 908, 1527
EarI CTCTTC 5 cut(s) 92, 113, 281, 908, 1527
EciI GGCGGA 3 cut(s) 10, 456, 712
Ecl136II GAGCTC 2 cut(s) 348, 552
EclXI CGGCCG 1 cut(s) 139
Eco130I CCWWGG 3 cut(s) 762, 870, 889
Eco24I GRGCYC 2 cut(s) 350, 554
Eco47I GGWCC 3 cut(s) 292, 1234, 1271
Eco52I CGGCCG 1 cut(s) 139
Eco53kI GAGCTC 2 cut(s) 348, 552
Eco72I CACGTG 1 cut(s) 497
EcoICRI GAGCTC 2 cut(s) 348, 552
EcoO109I RGGNCCY 1 cut(s) 292
EcoRII CCWGG 3 cut(s) 261, 719, 1084
EcoT14I CCWWGG 3 cut(s) 762, 870, 889
EcoT22I ATGCAT 1 cut(s) 1570
EcoT38I GRGCYC 2 cut(s) 350, 554
EgeI GGCGCC 1 cut(s) 1369
EheI GGCGCC 1 cut(s) 1369
ErhI CCWWGG 3 cut(s) 762, 870, 889
Esp3I CGTCTC 2 cut(s) 301, 890
FaqI GGGAC 1 cut(s) 305
FblI GTMKAC 2 cut(s) 315, 725
FokI GGATG 1 cut(s) 712
FriOI GRGCYC 2 cut(s) 350, 554
FspBI CTAG 4 cut(s) 218, 296, 395, 1529
GlaI GCGC 5 cut(s) 6, 216, 231, 577, 1369
GsuI CTGGAG 1 cut(s) 1368
HaeII RGCGCY 4 cut(s) 8, 218, 233, 1371
HaeIII GGCC 5 cut(s) 62, 84, 141, 894, 1245
HapII CCGG 6 cut(s) 75, 212, 602, 623, 674, 1313
HgaI GACGC 6 cut(s) 49, 104, 379, 418, 628, 1341
HhaI GCGC 5 cut(s) 7, 217, 232, 578, 1370
Hin1I GRCGYC 4 cut(s) 96, 429, 620, 1368
Hin6I GCGC 5 cut(s) 5, 215, 230, 576, 1368
HinP1I GCGC 5 cut(s) 5, 215, 230, 576, 1368
HincII GTYRAC 1 cut(s) 1329
HindII GTYRAC 1 cut(s) 1329
HinfI GANTC 4 cut(s) 132, 541, 796, 1437
HpaII CCGG 6 cut(s) 75, 212, 602, 623, 674, 1313
HphI GGTGA 2 cut(s) 82, 346
Hpy166II GTNNAC 4 cut(s) 164, 316, 726, 1329
Hpy188I TCNGA 3 cut(s) 475, 609, 1379
Hpy188III TCNNGA 4 cut(s) 127, 1177, 1347, 1441
Hpy8I GTNNAC 4 cut(s) 164, 316, 726, 1329
Hpy99I CGWCG 4 cut(s) 98, 434, 622, 1357
HpyAV CCTTC 3 cut(s) 871, 1119, 1354
HpyCH4III ACNGT 1 cut(s) 259
HpyCH4IV ACGT 5 cut(s) 160, 310, 496, 686, 883
HpyF10VI GCNNNNNNNGC 4 cut(s) 13, 638, 674, 1303
HpyF3I CTNAG 3 cut(s) 344, 1047, 1302
HpySE526I ACGT 5 cut(s) 160, 310, 496, 686, 883
Hsp92I GRCGYC 4 cut(s) 96, 429, 620, 1368
HspAI GCGC 5 cut(s) 5, 215, 230, 576, 1368
KasI GGCGCC 1 cut(s) 1367
KpnI GGTACC 1 cut(s) 52
KroI GCCGGC 1 cut(s) 74
KroNI GCCGGC 1 cut(s) 76
Kzo9I GATC 6 cut(s) 604, 898, 1114, 1374, 1379, 1523
LguI GCTCTTC 1 cut(s) 281
LmnI GCTCC 3 cut(s) 353, 423, 1349
Lsp1109I GCAGC 7 cut(s) 258, 280, 664, 770, 901, 963, 1387
LweI GCATC 4 cut(s) 444, 696, 857, 1021
MaeI CTAG 4 cut(s) 218, 296, 395, 1529
MaeII ACGT 5 cut(s) 160, 310, 496, 686, 883
MaeIII GTNAC 4 cut(s) 223, 559, 1063, 1489
MalI GATC 6 cut(s) 606, 900, 1116, 1376, 1381, 1525
MboI GATC 6 cut(s) 604, 898, 1114, 1374, 1379, 1523
MfeI CAATTG 2 cut(s) 1059, 1383
MflI RGATCY 1 cut(s) 604
MhlI GDGCHC 2 cut(s) 350, 554
MluCI AATT 9 cut(s) 669, 801, 875, 1059, 1080, 1119, 1134, 1264, 1383
Mly113I GGCGCC 1 cut(s) 1368
MlyI GAGTC 2 cut(s) 126, 805
MmeI TCCRAC 1 cut(s) 453
Mph1103I ATGCAT 1 cut(s) 1570
MroNI GCCGGC 1 cut(s) 74
MseI TTAA 2 cut(s) 585, 1017
MslI CAYNNNNRTG 1 cut(s) 569
MspA1I CMGCKG 1 cut(s) 271
MspI CCGG 6 cut(s) 75, 212, 602, 623, 674, 1313
MspR9I CCNGG 5 cut(s) 212, 263, 721, 1086, 1313
MunI CAATTG 2 cut(s) 1059, 1383
MvaI CCWGG 3 cut(s) 263, 721, 1086
MvnI CGCG 1 cut(s) 897
MwoI GCNNNNNNNGC 4 cut(s) 13, 638, 674, 1303
NaeI GCCGGC 1 cut(s) 76
NarI GGCGCC 1 cut(s) 1368
NciI CCSGG 2 cut(s) 212, 1313
NcoI CCATGG 1 cut(s) 889
NdeII GATC 6 cut(s) 604, 898, 1114, 1374, 1379, 1523
NgoMIV GCCGGC 1 cut(s) 74
NlaIV GGNNCC 5 cut(s) 50, 293, 419, 606, 1369
NmeAIII GCCGAG 4 cut(s) 117, 231, 405, 437
NmuCI GTSAC 1 cut(s) 559
NsiI ATGCAT 1 cut(s) 1570
NspI RCATGY 2 cut(s) 1043, 1568
PagI TCATGA 1 cut(s) 126
PaqCI CACCTGC 1 cut(s) 395
PciSI GCTCTTC 1 cut(s) 281
PcsI WCGNNNNNNNCGW 1 cut(s) 189
PdiI GCCGGC 1 cut(s) 76
PfeI GAWTC 2 cut(s) 541, 1437
PflFI GACNNNGTC 1 cut(s) 296
PfoI TCCNGGA 1 cut(s) 1084
PleI GAGTC 2 cut(s) 126, 804
PluTI GGCGCC 1 cut(s) 1371
PmaCI CACGTG 1 cut(s) 497
PmlI CACGTG 1 cut(s) 497
PpsI GAGTC 2 cut(s) 126, 804
Ppu21I YACGTR 1 cut(s) 497
PpuMI RGGWCCY 1 cut(s) 292
Psp124BI GAGCTC 2 cut(s) 350, 554
Psp5II RGGWCCY 1 cut(s) 292
Psp6I CCWGG 3 cut(s) 261, 719, 1084
PspCI CACGTG 1 cut(s) 497
PspGI CCWGG 3 cut(s) 261, 719, 1084
PspN4I GGNNCC 5 cut(s) 50, 293, 419, 606, 1369
PspPI GGNCC 4 cut(s) 82, 292, 1234, 1271
PspPPI RGGWCCY 1 cut(s) 292
PsrI GAACNNNNNNTAC 2 cut(s) 807, 839
PsuI RGATCY 1 cut(s) 604
PsyI GACNNNGTC 1 cut(s) 296
PvuII CAGCTG 1 cut(s) 271
RsaI GTAC 2 cut(s) 50, 689
RsaNI GTAC 2 cut(s) 49, 688
RseI CAYNNNNRTG 1 cut(s) 569
SacI GAGCTC 2 cut(s) 350, 554
SapI GCTCTTC 1 cut(s) 281
SaqAI TTAA 2 cut(s) 585, 1017
Sau3AI GATC 6 cut(s) 604, 898, 1114, 1374, 1379, 1523
Sau96I GGNCC 4 cut(s) 82, 292, 1234, 1271
SchI GAGTC 2 cut(s) 126, 805
ScrFI CCNGG 5 cut(s) 212, 263, 721, 1086, 1313
SduI GDGCHC 2 cut(s) 350, 554
SfaNI GCATC 4 cut(s) 444, 696, 857, 1021
SfcI CTRYAG 2 cut(s) 555, 946
SfoI GGCGCC 1 cut(s) 1369
SinI GGWCC 3 cut(s) 292, 1234, 1271
SmiMI CAYNNNNRTG 1 cut(s) 569
SmlI CTYRAG 1 cut(s) 793
SmoI CTYRAG 1 cut(s) 793
Sse9I AATT 9 cut(s) 669, 801, 875, 1059, 1080, 1119, 1134, 1264, 1383
SsiI CCGC 7 cut(s) 21, 142, 360, 441, 512, 697, 895
SspDI GGCGCC 1 cut(s) 1367
SspMI CTAG 4 cut(s) 218, 296, 395, 1529
SstI GAGCTC 2 cut(s) 350, 554
StyD4I CCNGG 5 cut(s) 210, 261, 719, 1084, 1311
StyI CCWWGG 3 cut(s) 762, 870, 889
TaaI ACNGT 1 cut(s) 259
TaiI ACGT 5 cut(s) 163, 313, 499, 689, 886
TaqI TCGA 5 cut(s) 183, 990, 1117, 1178, 1440
TasI AATT 9 cut(s) 669, 801, 875, 1059, 1080, 1119, 1134, 1264, 1383
TauI GCSGC 4 cut(s) 144, 363, 515, 897
TfiI GAWTC 2 cut(s) 541, 1437
Tru1I TTAA 2 cut(s) 585, 1017
Tru9I TTAA 2 cut(s) 585, 1017
TscAI CASTG 4 cut(s) 262, 738, 1105, 1208
TseFI GTSAC 1 cut(s) 559
TseI GCWGC 7 cut(s) 268, 271, 677, 758, 914, 951, 1400
Tsp45I GTSAC 1 cut(s) 559
TspDTI ATGAA 5 cut(s) 496, 828, 1099, 1219, 1572
TspRI CASTG 4 cut(s) 262, 738, 1105, 1208
Tth111I GACNNNGTC 1 cut(s) 296
VpaK11BI GGWCC 3 cut(s) 292, 1234, 1271
XapI RAATTY 3 cut(s) 875, 1134, 1264
XceI RCATGY 2 cut(s) 1043, 1568
XmiI GTMKAC 2 cut(s) 315, 725
XspI CTAG 4 cut(s) 218, 296, 395, 1529
Zsp2I ATGCAT 1 cut(s) 1570
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.