No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0002423.1_g000001 Rmu_sc0005151.1_g000001 Rmu_sc0005683.1_g000001 Rmu_sc0034959.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00229010 Rroxscaffold_4G00288770 Rroxscaffold_7G00179100 |
| rosa_rugosa | Rorug01G0053800 |
| rosa_samantha | Rh1BG056800 Rh1CG137400 Rh3AG254600 Rh5AG536900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 55 |
| AclWI | GGATC | 1 cut(s) | 172 |
| AgsI | TTSAA | 3 cut(s) | 46, 192, 218 |
| AluBI | AGCT | 2 cut(s) | 74, 121 |
| AluI | AGCT | 2 cut(s) | 74, 121 |
| Alw21I | GWGCWC | 1 cut(s) | 28 |
| AlwI | GGATC | 1 cut(s) | 172 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 73 |
| BanI | GGYRCC | 1 cut(s) | 55 |
| BbsI | GAAGAC | 1 cut(s) | 34 |
| Bbv12I | GWGCWC | 1 cut(s) | 28 |
| BfaI | CTAG | 1 cut(s) | 89 |
| BmiI | GGNNCC | 1 cut(s) | 57 |
| BmsI | GCATC | 1 cut(s) | 210 |
| BpiI | GAAGAC | 1 cut(s) | 34 |
| BpuEI | CTTGAG | 1 cut(s) | 66 |
| BsaBI | GATNNNNATC | 1 cut(s) | 169 |
| Bse3DI | GCAATG | 1 cut(s) | 99 |
| Bse8I | GATNNNNATC | 1 cut(s) | 169 |
| BseJI | GATNNNNATC | 1 cut(s) | 169 |
| BseMI | GCAATG | 1 cut(s) | 99 |
| BseMII | CTCAG | 1 cut(s) | 113 |
| BshNI | GGYRCC | 1 cut(s) | 55 |
| BsiHKAI | GWGCWC | 1 cut(s) | 28 |
| Bsp1286I | GDGCHC | 1 cut(s) | 28 |
| Bsp143I | GATC | 2 cut(s) | 8, 164 |
| BspCNI | CTCAG | 1 cut(s) | 114 |
| BspLI | GGNNCC | 1 cut(s) | 57 |
| BspPI | GGATC | 1 cut(s) | 172 |
| BspT107I | GGYRCC | 1 cut(s) | 55 |
| BsrDI | GCAATG | 1 cut(s) | 99 |
| BssMI | GATC | 2 cut(s) | 8, 164 |
| BstDEI | CTNAG | 2 cut(s) | 122, 150 |
| BstKTI | GATC | 2 cut(s) | 11, 167 |
| BstMBI | GATC | 2 cut(s) | 8, 164 |
| BstV2I | GAAGAC | 1 cut(s) | 34 |
| CseI | GACGC | 1 cut(s) | 28 |
| CviJI | RGCY | 3 cut(s) | 74, 121, 188 |
| CviKI_1 | RGCY | 3 cut(s) | 74, 121, 188 |
| DdeI | CTNAG | 2 cut(s) | 122, 150 |
| DpnI | GATC | 2 cut(s) | 10, 166 |
| DpnII | GATC | 2 cut(s) | 8, 164 |
| FspBI | CTAG | 1 cut(s) | 89 |
| HgaI | GACGC | 1 cut(s) | 28 |
| HindIII | AAGCTT | 1 cut(s) | 72 |
| HinfI | GANTC | 1 cut(s) | 4 |
| Hpy188III | TCNNGA | 1 cut(s) | 46 |
| Hpy99I | CGWCG | 1 cut(s) | 67 |
| HpyAV | CCTTC | 2 cut(s) | 69, 120 |
| HpyCH4V | TGCA | 2 cut(s) | 15, 201 |
| HpyF3I | CTNAG | 2 cut(s) | 122, 150 |
| Kzo9I | GATC | 2 cut(s) | 8, 164 |
| LpnPI | CCDG | 1 cut(s) | 131 |
| LweI | GCATC | 1 cut(s) | 210 |
| MaeI | CTAG | 1 cut(s) | 89 |
| MalI | GATC | 2 cut(s) | 10, 166 |
| MboI | GATC | 2 cut(s) | 8, 164 |
| MboII | GAAGA | 1 cut(s) | 34 |
| MhlI | GDGCHC | 1 cut(s) | 28 |
| MnlI | CCTC | 2 cut(s) | 88, 102 |
| MroXI | GAANNNNTTC | 1 cut(s) | 73 |
| MspA1I | CMGCKG | 1 cut(s) | 121 |
| NdeII | GATC | 2 cut(s) | 8, 164 |
| NlaIV | GGNNCC | 1 cut(s) | 57 |
| PdmI | GAANNNNTTC | 1 cut(s) | 73 |
| PfeI | GAWTC | 1 cut(s) | 4 |
| PspN4I | GGNNCC | 1 cut(s) | 57 |
| PvuII | CAGCTG | 1 cut(s) | 121 |
| Sau3AI | GATC | 2 cut(s) | 8, 164 |
| SduI | GDGCHC | 1 cut(s) | 28 |
| SetI | ASST | 3 cut(s) | 61, 76, 123 |
| SfaNI | GCATC | 1 cut(s) | 210 |
| SgeI | CNNG | 9 cut(s) | 24, 35, 58, 78, 95, 101, 130, 144, 186 |
| SmlI | CTYRAG | 1 cut(s) | 81 |
| SmoI | CTYRAG | 1 cut(s) | 81 |
| SspMI | CTAG | 1 cut(s) | 89 |
| TaqI | TCGA | 2 cut(s) | 7, 62 |
| TfiI | GAWTC | 1 cut(s) | 4 |
| XmnI | GAANNNNTTC | 1 cut(s) | 73 |
| XspI | CTAG | 1 cut(s) | 89 |