splicing factor 3A subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0002423.1_g000001 Rmu_sc0005151.1_g000001 Rmu_sc0005683.1_g000001 Rmu_sc0034959.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00229010 Rroxscaffold_4G00288770 Rroxscaffold_7G00179100 |
| rosa_rugosa | Rorug01G0053800 |
| rosa_samantha | Rh1BG056800 Rh1CG137400 Rh3AG254600 Rh5AG536900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 79 |
| AciI | CCGC | 1 cut(s) | 257 |
| AfaI | GTAC | 1 cut(s) | 278 |
| AgsI | TTSAA | 3 cut(s) | 123, 146, 249 |
| AhlI | ACTAGT | 1 cut(s) | 23 |
| AjnI | CCWGG | 1 cut(s) | 220 |
| AluBI | AGCT | 1 cut(s) | 208 |
| AluI | AGCT | 1 cut(s) | 208 |
| Alw26I | GTCTC | 1 cut(s) | 14 |
| AspLEI | GCGC | 1 cut(s) | 79 |
| AspS9I | GGNCC | 1 cut(s) | 224 |
| AvaII | GGWCC | 1 cut(s) | 224 |
| BciT130I | CCWGG | 1 cut(s) | 222 |
| BcoDI | GTCTC | 1 cut(s) | 14 |
| BcuI | ACTAGT | 1 cut(s) | 23 |
| BfaI | CTAG | 1 cut(s) | 24 |
| BglII | AGATCT | 1 cut(s) | 51 |
| BmcAI | AGTACT | 1 cut(s) | 278 |
| Bme1390I | CCNGG | 1 cut(s) | 222 |
| Bme18I | GGWCC | 1 cut(s) | 224 |
| BmgT120I | GGNCC | 1 cut(s) | 224 |
| BmiI | GGNNCC | 1 cut(s) | 103 |
| BmrFI | CCNGG | 1 cut(s) | 222 |
| BmsI | GCATC | 1 cut(s) | 181 |
| Bpu10I | CCTNAGC | 1 cut(s) | 209 |
| BpuEI | CTTGAG | 1 cut(s) | 40 |
| BsaJI | CCNNGG | 1 cut(s) | 108 |
| BseBI | CCWGG | 1 cut(s) | 222 |
| BseDI | CCNNGG | 1 cut(s) | 108 |
| BseMII | CTCAG | 1 cut(s) | 129 |
| BseRI | GAGGAG | 1 cut(s) | 125 |
| Bsh1236I | CGCG | 1 cut(s) | 79 |
| BsmAI | GTCTC | 1 cut(s) | 14 |
| Bsp143I | GATC | 1 cut(s) | 51 |
| BspACI | CCGC | 1 cut(s) | 257 |
| BspCNI | CTCAG | 1 cut(s) | 130 |
| BspFNI | CGCG | 1 cut(s) | 79 |
| BspLI | GGNNCC | 1 cut(s) | 103 |
| BssECI | CCNNGG | 1 cut(s) | 108 |
| BssMI | GATC | 1 cut(s) | 51 |
| Bst2UI | CCWGG | 1 cut(s) | 222 |
| Bst4CI | ACNGT | 1 cut(s) | 281 |
| BstDEI | CTNAG | 3 cut(s) | 9, 138, 209 |
| BstFNI | CGCG | 1 cut(s) | 79 |
| BstHHI | GCGC | 1 cut(s) | 79 |
| BstKTI | GATC | 1 cut(s) | 54 |
| BstMAI | GTCTC | 1 cut(s) | 14 |
| BstMBI | GATC | 1 cut(s) | 51 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 134 |
| BstNI | CCWGG | 1 cut(s) | 222 |
| BstNSI | RCATGY | 1 cut(s) | 244 |
| BstSCI | CCNGG | 1 cut(s) | 220 |
| BstUI | CGCG | 1 cut(s) | 79 |
| BstX2I | RGATCY | 1 cut(s) | 51 |
| BstYI | RGATCY | 1 cut(s) | 51 |
| CfoI | GCGC | 1 cut(s) | 79 |
| Cfr13I | GGNCC | 1 cut(s) | 224 |
| Csp6I | GTAC | 1 cut(s) | 277 |
| CviAII | CATG | 1 cut(s) | 241 |
| CviJI | RGCY | 2 cut(s) | 137, 208 |
| CviKI_1 | RGCY | 2 cut(s) | 137, 208 |
| CviQI | GTAC | 1 cut(s) | 277 |
| DdeI | CTNAG | 3 cut(s) | 9, 138, 209 |
| DpnI | GATC | 1 cut(s) | 53 |
| DpnII | GATC | 1 cut(s) | 51 |
| EciI | GGCGGA | 1 cut(s) | 246 |
| Eco32I | GATATC | 1 cut(s) | 159 |
| Eco47I | GGWCC | 1 cut(s) | 224 |
| EcoRII | CCWGG | 1 cut(s) | 220 |
| EcoRV | GATATC | 1 cut(s) | 159 |
| FaeI | CATG | 1 cut(s) | 244 |
| FaiI | YATR | 2 cut(s) | 65, 242 |
| FatI | CATG | 1 cut(s) | 240 |
| FspBI | CTAG | 1 cut(s) | 24 |
| GlaI | GCGC | 1 cut(s) | 78 |
| HhaI | GCGC | 1 cut(s) | 79 |
| Hin1II | CATG | 1 cut(s) | 244 |
| Hin6I | GCGC | 1 cut(s) | 77 |
| HinP1I | GCGC | 1 cut(s) | 77 |
| HinfI | GANTC | 2 cut(s) | 13, 142 |
| Hpy166II | GTNNAC | 2 cut(s) | 70, 199 |
| Hpy188III | TCNNGA | 3 cut(s) | 17, 57, 89 |
| Hpy8I | GTNNAC | 2 cut(s) | 70, 199 |
| HpyAV | CCTTC | 1 cut(s) | 255 |
| HpyCH4III | ACNGT | 1 cut(s) | 281 |
| HpyCH4V | TGCA | 2 cut(s) | 38, 284 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 134 |
| HpyF3I | CTNAG | 3 cut(s) | 9, 138, 209 |
| Hsp92II | CATG | 1 cut(s) | 244 |
| HspAI | GCGC | 1 cut(s) | 77 |
| Kzo9I | GATC | 1 cut(s) | 51 |
| LpnPI | CCDG | 6 cut(s) | 26, 102, 207, 234, 240, 249 |
| LweI | GCATC | 1 cut(s) | 181 |
| MaeI | CTAG | 1 cut(s) | 24 |
| MalI | GATC | 1 cut(s) | 53 |
| MboI | GATC | 1 cut(s) | 51 |
| MboII | GAAGA | 1 cut(s) | 245 |
| MflI | RGATCY | 1 cut(s) | 51 |
| MluCI | AATT | 1 cut(s) | 249 |
| MnlI | CCTC | 3 cut(s) | 103, 106, 172 |
| MspR9I | CCNGG | 1 cut(s) | 222 |
| MvaI | CCWGG | 1 cut(s) | 222 |
| MvnI | CGCG | 1 cut(s) | 79 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 134 |
| NdeII | GATC | 1 cut(s) | 51 |
| NlaIII | CATG | 1 cut(s) | 244 |
| NlaIV | GGNNCC | 1 cut(s) | 103 |
| NspI | RCATGY | 1 cut(s) | 244 |
| PfeI | GAWTC | 2 cut(s) | 13, 142 |
| Psp6I | CCWGG | 1 cut(s) | 220 |
| PspGI | CCWGG | 1 cut(s) | 220 |
| PspN4I | GGNNCC | 1 cut(s) | 103 |
| PspPI | GGNCC | 1 cut(s) | 224 |
| PsuI | RGATCY | 1 cut(s) | 51 |
| RsaI | GTAC | 1 cut(s) | 278 |
| RsaNI | GTAC | 1 cut(s) | 277 |
| Sau3AI | GATC | 1 cut(s) | 51 |
| Sau96I | GGNCC | 1 cut(s) | 224 |
| ScaI | AGTACT | 1 cut(s) | 278 |
| ScrFI | CCNGG | 1 cut(s) | 222 |
| SetI | ASST | 3 cut(s) | 75, 210, 238 |
| SfaNI | GCATC | 1 cut(s) | 181 |
| SinI | GGWCC | 1 cut(s) | 224 |
| SmlI | CTYRAG | 1 cut(s) | 55 |
| SmoI | CTYRAG | 1 cut(s) | 55 |
| SpeI | ACTAGT | 1 cut(s) | 23 |
| Sse9I | AATT | 1 cut(s) | 249 |
| SsiI | CCGC | 1 cut(s) | 257 |
| SspMI | CTAG | 1 cut(s) | 24 |
| StyD4I | CCNGG | 1 cut(s) | 220 |
| TaaI | ACNGT | 1 cut(s) | 281 |
| TasI | AATT | 1 cut(s) | 249 |
| TatI | WGTACW | 1 cut(s) | 276 |
| TfiI | GAWTC | 2 cut(s) | 13, 142 |
| VpaK11BI | GGWCC | 1 cut(s) | 224 |
| XceI | RCATGY | 1 cut(s) | 244 |
| XspI | CTAG | 1 cut(s) | 24 |
| ZrmI | AGTACT | 1 cut(s) | 278 |