No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G24010 |
| fragaria_vesca | FvH4_7g30170 |
| malus_domestica | MD01G1207700.v1.1 MD07G1278300.v1.1 |
| prunus_persica | Prupe.2G300200_v2.0.a1 |
| pyrus_communis | pycom01g21850 pycom07g25330 |
| rosa_chinensis | RchiOBHm_Chr1g0359691 RchiOBHm_Chr1g0378221 RchiOBHm_Chr4g0438201 RchiOBHm_Chr6g0283241 RchiOBHm_Chr7g0214091 |
| rosa_laevigata | RLG00000026460 |
| rosa_multiflora | Rmu_sc0005657.1_g000022 Rmu_sc0038642.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00137220 Rroxscaffold_4G00280640 |
| rosa_rugosa | Rorug01G0407100 Rorug07G0113600 |
| rosa_samantha | Rh1AG422600 Rh1BG386500 Rh1CG056300 Rh1CG400100 Rh1DG417700 |
| rosa_wichuraiana | Rw1G037480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 230 |
| AclWI | GGATC | 1 cut(s) | 257 |
| AcsI | RAATTY | 2 cut(s) | 67, 239 |
| AgsI | TTSAA | 1 cut(s) | 62 |
| AluBI | AGCT | 3 cut(s) | 17, 50, 127 |
| AluI | AGCT | 3 cut(s) | 17, 50, 127 |
| AlwI | GGATC | 1 cut(s) | 257 |
| AoxI | GGCC | 1 cut(s) | 90 |
| ApeKI | GCWGC | 1 cut(s) | 258 |
| ApoI | RAATTY | 2 cut(s) | 67, 239 |
| AspS9I | GGNCC | 1 cut(s) | 91 |
| BbvCI | CCTCAGC | 2 cut(s) | 13, 128 |
| BbvI | GCAGC | 1 cut(s) | 245 |
| BfmI | CTRYAG | 1 cut(s) | 51 |
| BisI | GCNGC | 1 cut(s) | 259 |
| BlsI | GCNGC | 1 cut(s) | 260 |
| BmgT120I | GGNCC | 1 cut(s) | 91 |
| BmiI | GGNNCC | 2 cut(s) | 24, 93 |
| Bpu10I | CCTNAGC | 2 cut(s) | 13, 128 |
| BsaBI | GATNNNNATC | 1 cut(s) | 222 |
| BsaJI | CCNNGG | 1 cut(s) | 188 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 133, 163 |
| Bse8I | GATNNNNATC | 1 cut(s) | 222 |
| BseDI | CCNNGG | 1 cut(s) | 188 |
| BseGI | GGATG | 1 cut(s) | 285 |
| BseJI | GATNNNNATC | 1 cut(s) | 222 |
| BseMII | CTCAG | 2 cut(s) | 27, 119 |
| BseXI | GCAGC | 1 cut(s) | 245 |
| BshFI | GGCC | 1 cut(s) | 92 |
| BsmI | GAATGC | 1 cut(s) | 210 |
| BsnI | GGCC | 1 cut(s) | 92 |
| Bsp143I | GATC | 2 cut(s) | 223, 262 |
| BspANI | GGCC | 1 cut(s) | 92 |
| BspCNI | CTCAG | 2 cut(s) | 26, 120 |
| BspLI | GGNNCC | 2 cut(s) | 24, 93 |
| BspPI | GGATC | 1 cut(s) | 257 |
| BspQI | GCTCTTC | 1 cut(s) | 40 |
| BssECI | CCNNGG | 1 cut(s) | 188 |
| BssMI | GATC | 2 cut(s) | 223, 262 |
| BssNAI | GTATAC | 1 cut(s) | 231 |
| BssT1I | CCWWGG | 1 cut(s) | 188 |
| Bst1107I | GTATAC | 1 cut(s) | 231 |
| Bst6I | CTCTTC | 1 cut(s) | 40 |
| BstDEI | CTNAG | 3 cut(s) | 13, 128, 158 |
| BstF5I | GGATG | 1 cut(s) | 285 |
| BstKTI | GATC | 2 cut(s) | 226, 265 |
| BstMBI | GATC | 2 cut(s) | 223, 262 |
| BstSFI | CTRYAG | 1 cut(s) | 51 |
| BstV1I | GCAGC | 1 cut(s) | 245 |
| BstZ17I | GTATAC | 1 cut(s) | 231 |
| BsuRI | GGCC | 1 cut(s) | 92 |
| BtsCI | GGATG | 1 cut(s) | 285 |
| Cfr13I | GGNCC | 1 cut(s) | 91 |
| CviAII | CATG | 1 cut(s) | 104 |
| CviJI | RGCY | 8 cut(s) | 11, 17, 23, 50, 92, 127, 193, 258 |
| CviKI_1 | RGCY | 8 cut(s) | 11, 17, 23, 50, 92, 127, 193, 258 |
| DdeI | CTNAG | 3 cut(s) | 13, 128, 158 |
| DpnI | GATC | 2 cut(s) | 225, 264 |
| DpnII | GATC | 2 cut(s) | 223, 262 |
| Eam1104I | CTCTTC | 1 cut(s) | 40 |
| EarI | CTCTTC | 1 cut(s) | 40 |
| Eco130I | CCWWGG | 1 cut(s) | 188 |
| EcoO109I | RGGNCCY | 1 cut(s) | 91 |
| EcoT14I | CCWWGG | 1 cut(s) | 188 |
| ErhI | CCWWGG | 1 cut(s) | 188 |
| FaeI | CATG | 1 cut(s) | 107 |
| FaiI | YATR | 7 cut(s) | 53, 75, 105, 146, 170, 222, 231 |
| FatI | CATG | 1 cut(s) | 103 |
| FblI | GTMKAC | 1 cut(s) | 230 |
| Fnu4HI | GCNGC | 1 cut(s) | 259 |
| FokI | GGATG | 1 cut(s) | 292 |
| Fsp4HI | GCNGC | 1 cut(s) | 259 |
| GluI | GCNGC | 1 cut(s) | 259 |
| HaeIII | GGCC | 1 cut(s) | 92 |
| Hin1II | CATG | 1 cut(s) | 107 |
| Hpy166II | GTNNAC | 1 cut(s) | 231 |
| Hpy188I | TCNGA | 2 cut(s) | 200, 245 |
| Hpy188III | TCNNGA | 1 cut(s) | 215 |
| Hpy8I | GTNNAC | 1 cut(s) | 231 |
| HpyCH4V | TGCA | 1 cut(s) | 73 |
| HpyF3I | CTNAG | 3 cut(s) | 13, 128, 158 |
| Hsp92II | CATG | 1 cut(s) | 107 |
| Kzo9I | GATC | 2 cut(s) | 223, 262 |
| LguI | GCTCTTC | 1 cut(s) | 40 |
| LmnI | GCTCC | 1 cut(s) | 28 |
| LpnPI | CCDG | 2 cut(s) | 5, 286 |
| Lsp1109I | GCAGC | 1 cut(s) | 245 |
| MalI | GATC | 2 cut(s) | 225, 264 |
| MboI | GATC | 2 cut(s) | 223, 262 |
| MboII | GAAGA | 4 cut(s) | 57, 170, 173, 176 |
| MluCI | AATT | 3 cut(s) | 67, 97, 239 |
| MnlI | CCTC | 5 cut(s) | 22, 35, 123, 159, 269 |
| MseI | TTAA | 2 cut(s) | 119, 287 |
| Mva1269I | GAATGC | 1 cut(s) | 210 |
| NdeII | GATC | 2 cut(s) | 223, 262 |
| NlaIII | CATG | 1 cut(s) | 107 |
| NlaIV | GGNNCC | 2 cut(s) | 24, 93 |
| PciSI | GCTCTTC | 1 cut(s) | 40 |
| PctI | GAATGC | 1 cut(s) | 210 |
| PkrI | GCNGC | 1 cut(s) | 260 |
| PspN4I | GGNNCC | 2 cut(s) | 24, 93 |
| PspPI | GGNCC | 1 cut(s) | 91 |
| SapI | GCTCTTC | 1 cut(s) | 40 |
| SaqAI | TTAA | 2 cut(s) | 119, 287 |
| SatI | GCNGC | 1 cut(s) | 259 |
| Sau3AI | GATC | 2 cut(s) | 223, 262 |
| Sau96I | GGNCC | 1 cut(s) | 91 |
| SetI | ASST | 6 cut(s) | 19, 52, 58, 129, 151, 294 |
| SfcI | CTRYAG | 1 cut(s) | 51 |
| SgeI | CNNG | 8 cut(s) | 32, 100, 116, 136, 201, 227, 279, 285 |
| Sse9I | AATT | 3 cut(s) | 67, 97, 239 |
| SspI | AATATT | 1 cut(s) | 252 |
| StyI | CCWWGG | 1 cut(s) | 188 |
| TaqI | TCGA | 1 cut(s) | 123 |
| TasI | AATT | 3 cut(s) | 67, 97, 239 |
| Tru1I | TTAA | 2 cut(s) | 119, 287 |
| Tru9I | TTAA | 2 cut(s) | 119, 287 |
| TseI | GCWGC | 1 cut(s) | 258 |
| TspDTI | ATGAA | 1 cut(s) | 92 |
| XapI | RAATTY | 2 cut(s) | 67, 239 |
| XmiI | GTMKAC | 1 cut(s) | 230 |