Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0010148

Physical Location & Seq

Genomic Coordinates Forward (+)

35608340 .. 35614649

Gene Structure 6310 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG172800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1011 bp

ATGGAGGGATTCAAATTTGAGGAGCAAGAATTCTTCGCTTGCTGTGGAAGCTCCAAATTCGCCAAAGAAATGGCCAAGGCCTCTCCTTTCTCTTCTCTCGACGAAGCCGTGACTGCGGCCAGAGACATTTGGTTCAACACGGTCGACGTCACCGGTTGGCTTCAGGCCTTCTCCGCTCATCCTCAGATCGGCCACAATCCTTCTCCTTCTTCCCACTCCACCTCTGCTCAGTGGAGCAAAGGAGAGCAGTCAACTGCTTTTGCAACTGCTACTAGTTCAAGCTTACAGGAGCTCTCTCAATGGAATACTAAATACAGGGAAAAGTTTGGGTTTGTATTTCTTATTTGTGCATCGGGAAAGAGCACTGATGGGATACTTGCTGAATTGAAGAGACGATATCCAAATAGGCCTATCGTTGAGTTTGAGATTGCAGCTGAGGAGCAGATGAAAATAACAGAATTACGTCTTGCGAAACTTTTCTCAACTAAAGAAAAGGTTCCTTCAACAGGCAACATGAATCCCACAGTTGCTGCAAAGAAAGTGGAAGAAGATCGTGTGAGCATTATTGGAGGTCATCTAAGTGCTTCTACTGAAATTTCAGCTGTAAAAACTCAGACTCCAACTCGAACCCGTCCACCCATCACAACCCATGTCCTGGATGTTTCTCGAGGATCTCCGGGTGCAGGCATTGAGGTATGTTTAGAAATGTGGAAGGGTCATCAACCTCATCAACCTCGTCCTGTGTTTGGCGAGTCAGCTATAGGCGGTTGGGTATTTCAAGGGTCTTCAACTACGAATAGTGATGGGCGAAGTGGTCAGTTGTTGAACATAGTTGATGCGGTGAACCCAGGGATATACAGGATAAGTTTTAACACCGGCAAGTACTGCCCAGATGGGTTCTTTCCTTATGTTTCCATTGTGTTTGAAATCAGGGAGTCACAGAAGTTGGAACATTTTCATGTTCCTCTGCTGTTGTCACCTTTCTCATTCTCAACTTACCGTGGAAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000255 GO:0001558 GO:0001560 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005829 GO:0005886 GO:0006139 GO:0006144 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009112 GO:0009605 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009898 GO:0009987 GO:0009991 GO:0010033 GO:0014070 GO:0016020 GO:0016043 GO:0016787 GO:0016810 GO:0016812 GO:0016829 GO:0016830 GO:0016831 GO:0017144 GO:0018130 GO:0019428 GO:0019897 GO:0019898 GO:0022607 GO:0023052 GO:0031234 GO:0031668 GO:0032870 GO:0033971 GO:0033993 GO:0034641 GO:0040008 GO:0042221 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043401 GO:0043603 GO:0043604 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046483 GO:0048545 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051259 GO:0051260 GO:0051262 GO:0051289 GO:0051716 GO:0051997 GO:0055086 GO:0065003 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071496 GO:0071704 GO:0071840 GO:0071944 GO:0072521 GO:0098552 GO:0098562 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 map00230 map01100

Pfam Domains

Protein Families

OHCU_decarbox Transthyretin

Protein Analysis

336

Amino Acids

37.02

Weight (kDa)

7.12

Isoelectric Point (pI)

43.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OHCU_decarbox	PF09349	9 - 157	3e-35	OHCU decarboxylase
Transthyretin	PF00576	214 - 335	2.8e-30	HIUase/Transthyretin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010148)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58220 AT5G58220 AT5G58220
fragaria_vesca	FvH4_7g08020 FvH4_7g08020 FvH4_7g08020
malus_domestica	MD00G1098400.v1.1
prunus_persica	Prupe.2G109200_v2.0.a1
pyrus_communis	pycom07g06690
rosa_chinensis	RchiOBHm_Chr1g0341291
rosa_laevigata	RLG00000029080
rosa_multiflora	Rmu_sc0004092.1_g000046
rosa_roxburghii	Rroxscaffold_4G00311920
rosa_rugosa	Rorug01G0157900.1 Rorug01G0158000.1 Rorug01G0158100.1
rosa_samantha	Rh1AG172500 Rh1BG140600 Rh1CG160600 Rh1DG172800
rosa_wichuraiana	Rw1G014390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	150
AccB7I	CCANNNNNTGG	1 cut(s)	655
AccBSI	CCGCTC	1 cut(s)	176
AccI	GTMKAC	1 cut(s)	144
AciI	CCGC	4 cut(s)	116, 174, 765, 839
AclWI	GGATC	1 cut(s)	679
AcoI	YGGCCR	3 cut(s)	72, 117, 190
AcsI	RAATTY	4 cut(s)	14, 29, 56, 594
AcuI	CTGAAG	1 cut(s)	146
AcyI	GRCGYC	1 cut(s)	147
AfaI	GTAC	1 cut(s)	884
AfiI	CCNNNNNNNGG	5 cut(s)	188, 506, 655, 683, 746
AgeI	ACCGGT	1 cut(s)	152
AgsI	TTSAA	9 cut(s)	13, 136, 279, 388, 504, 779, 789, 826, 926
AhlI	ACTAGT	1 cut(s)	272
AjnI	CCWGG	2 cut(s)	654, 847
AluBI	AGCT	7 cut(s)	51, 282, 292, 434, 602, 758, 1008
AluI	AGCT	7 cut(s)	51, 282, 292, 434, 602, 758, 1008
Alw21I	GWGCWC	2 cut(s)	294, 365
Alw26I	GTCTC	2 cut(s)	117, 385
AlwI	GGATC	1 cut(s)	679
AlwNI	CAGNNNCTG	1 cut(s)	530
Ama87I	CYCGRG	1 cut(s)	666
AoxI	GGCC	6 cut(s)	72, 78, 117, 165, 190, 407
ApeKI	GCWGC	2 cut(s)	431, 530
ApoI	RAATTY	4 cut(s)	14, 29, 56, 594
AsiGI	ACCGGT	1 cut(s)	152
Asp700I	GAANNNNTTC	3 cut(s)	476, 495, 954
AsuC2I	CCSGG	1 cut(s)	678
AsuHPI	GGTGA	3 cut(s)	142, 853, 969
AvaI	CYCGRG	1 cut(s)	666
BalI	TGGCCA	1 cut(s)	74
BanII	GRGCYC	1 cut(s)	294
BbsI	GAAGAC	1 cut(s)	777
Bbv12I	GWGCWC	2 cut(s)	294, 365
BbvCI	CCTCAGC	1 cut(s)	435
BbvI	GCAGC	2 cut(s)	443, 517
BccI	CCATC	4 cut(s)	362, 647, 797, 887
BceAI	ACGGC	1 cut(s)	92
BciT130I	CCWGG	2 cut(s)	656, 849
BciVI	GTATCC	1 cut(s)	366
BcnI	CCSGG	1 cut(s)	678
BcoDI	GTCTC	2 cut(s)	117, 385
BcuI	ACTAGT	1 cut(s)	272
BfaI	CTAG	2 cut(s)	273, 1009
BfmI	CTRYAG	1 cut(s)	759
BfuI	GTATCC	1 cut(s)	366
BisI	GCNGC	3 cut(s)	117, 432, 531
BlsI	GCNGC	3 cut(s)	118, 433, 532
BmcAI	AGTACT	1 cut(s)	884
Bme1390I	CCNGG	3 cut(s)	656, 678, 849
BmeT110I	CYCGRG	1 cut(s)	666
BmiI	GGNNCC	1 cut(s)	498
BmrFI	CCNGG	3 cut(s)	656, 678, 849
BmsI	GCATC	2 cut(s)	359, 826
BpiI	GAAGAC	1 cut(s)	777
Bpu10I	CCTNAGC	1 cut(s)	435
BpuMI	CCSGG	1 cut(s)	678
BsaHI	GRCGYC	1 cut(s)	147
BsaJI	CCNNGG	4 cut(s)	75, 847, 848, 1000
BsaWI	WCCGGW	1 cut(s)	152
BsaXI	ACNNNNNCTCC	2 cut(s)	601, 631
Bsc4I	CCNNNNNNNGG	5 cut(s)	188, 506, 655, 683, 746
Bse118I	RCCGGY	2 cut(s)	152, 875
BseBI	CCWGG	2 cut(s)	656, 849
BseDI	CCNNGG	4 cut(s)	75, 847, 848, 1000
BseGI	GGATG	2 cut(s)	178, 664
BseLI	CCNNNNNNNGG	5 cut(s)	188, 506, 655, 683, 746
BseMII	CTCAG	4 cut(s)	197, 242, 426, 626
BseRI	GAGGAG	2 cut(s)	35, 452
BseXI	GCAGC	2 cut(s)	443, 517
BsgI	GTGCAG	1 cut(s)	702
Bsh1285I	CGRYCG	1 cut(s)	144
BshFI	GGCC	6 cut(s)	74, 80, 119, 167, 192, 409
BshTI	ACCGGT	1 cut(s)	152
BsiEI	CGRYCG	1 cut(s)	144
BsiHKAI	GWGCWC	2 cut(s)	294, 365
BsiHKCI	CYCGRG	1 cut(s)	666
BsiSI	CCGG	3 cut(s)	153, 677, 876
BslI	CCNNNNNNNGG	5 cut(s)	188, 506, 655, 683, 746
BsmAI	GTCTC	2 cut(s)	117, 385
BsmBI	CGTCTC	1 cut(s)	385
BsnI	GGCC	6 cut(s)	74, 80, 119, 167, 192, 409
BsoBI	CYCGRG	1 cut(s)	666
Bsp1286I	GDGCHC	2 cut(s)	294, 365
Bsp143I	GATC	3 cut(s)	186, 550, 671
BspACI	CCGC	4 cut(s)	116, 174, 765, 839
BspANI	GGCC	6 cut(s)	74, 80, 119, 167, 192, 409
BspCNI	CTCAG	4 cut(s)	196, 241, 427, 625
BspLI	GGNNCC	1 cut(s)	498
BspPI	GGATC	1 cut(s)	679
BsrBI	CCGCTC	1 cut(s)	176
BsrFI	RCCGGY	2 cut(s)	152, 875
BssAI	RCCGGY	2 cut(s)	152, 875
BssECI	CCNNGG	4 cut(s)	75, 847, 848, 1000
BssMI	GATC	3 cut(s)	186, 550, 671
BssNI	GRCGYC	1 cut(s)	147
BssT1I	CCWWGG	1 cut(s)	75
Bst2UI	CCWGG	2 cut(s)	656, 849
Bst4CI	ACNGT	3 cut(s)	142, 526, 1001
Bst6I	CTCTTC	2 cut(s)	97, 383
BstACI	GRCGYC	1 cut(s)	147
BstAPI	GCANNNNNTGC	1 cut(s)	885
BstC8I	GCNNGC	2 cut(s)	40, 685
BstDEI	CTNAG	5 cut(s)	183, 228, 435, 578, 612
BstDSI	CCRYGG	1 cut(s)	1000
BstENI	CCTNNNNNAGG	1 cut(s)	504
BstF5I	GGATG	2 cut(s)	178, 664
BstKTI	GATC	3 cut(s)	189, 553, 674
BstMAI	GTCTC	2 cut(s)	117, 385
BstMBI	GATC	3 cut(s)	186, 550, 671
BstMCI	CGRYCG	1 cut(s)	144
BstMWI	GCNNNNNNNGC	4 cut(s)	48, 113, 173, 885
BstNI	CCWGG	2 cut(s)	656, 849
BstSCI	CCNGG	3 cut(s)	654, 676, 847
BstSFI	CTRYAG	1 cut(s)	759
BstV1I	GCAGC	2 cut(s)	443, 517
BstV2I	GAAGAC	1 cut(s)	777
BstX2I	RGATCY	1 cut(s)	671
BstXI	CCANNNNNNTGG	1 cut(s)	70
BstYI	RGATCY	1 cut(s)	671
BsuI	GTATCC	1 cut(s)	366
BsuRI	GGCC	6 cut(s)	74, 80, 119, 167, 192, 409
BtgI	CCRYGG	1 cut(s)	1000
BtsCI	GGATG	2 cut(s)	178, 664
BtsIMutI	CAGTG	2 cut(s)	236, 363
Cac8I	GCNNGC	2 cut(s)	40, 685
CaiI	CAGNNNCTG	1 cut(s)	530
Cfr10I	RCCGGY	2 cut(s)	152, 875
Csp6I	GTAC	1 cut(s)	883
CspAI	ACCGGT	1 cut(s)	152
CspCI	CAANNNNNGTGG	2 cut(s)	522, 557
CviAII	CATG	3 cut(s)	514, 650, 959
CviQI	GTAC	1 cut(s)	883
DdeI	CTNAG	5 cut(s)	183, 228, 435, 578, 612
DpnI	GATC	3 cut(s)	188, 552, 673
DpnII	GATC	3 cut(s)	186, 550, 671
EaeI	YGGCCR	3 cut(s)	72, 117, 190
Eam1104I	CTCTTC	2 cut(s)	97, 383
EarI	CTCTTC	2 cut(s)	97, 383
Ecl136II	GAGCTC	1 cut(s)	292
Eco130I	CCWWGG	1 cut(s)	75
Eco147I	AGGCCT	3 cut(s)	80, 167, 409
Eco24I	GRGCYC	1 cut(s)	294
Eco32I	GATATC	1 cut(s)	398
Eco53kI	GAGCTC	1 cut(s)	292
Eco57I	CTGAAG	1 cut(s)	146
Eco88I	CYCGRG	1 cut(s)	666
EcoICRI	GAGCTC	1 cut(s)	292
EcoNI	CCTNNNNNAGG	1 cut(s)	504
EcoRI	GAATTC	1 cut(s)	29
EcoRII	CCWGG	2 cut(s)	654, 847
EcoRV	GATATC	1 cut(s)	398
EcoT14I	CCWWGG	1 cut(s)	75
EcoT38I	GRGCYC	1 cut(s)	294
ErhI	CCWWGG	1 cut(s)	75
Esp3I	CGTCTC	1 cut(s)	385
FaeI	CATG	3 cut(s)	517, 653, 962
FaiI	YATR	8 cut(s)	515, 651, 697, 761, 830, 856, 909, 960
FatI	CATG	3 cut(s)	513, 649, 958
FblI	GTMKAC	1 cut(s)	144
Fnu4HI	GCNGC	3 cut(s)	117, 432, 531
FokI	GGATG	2 cut(s)	165, 671
FriOI	GRGCYC	1 cut(s)	294
Fsp4HI	GCNGC	3 cut(s)	117, 432, 531
FspBI	CTAG	2 cut(s)	273, 1009
GluI	GCNGC	3 cut(s)	117, 432, 531
HaeIII	GGCC	6 cut(s)	74, 80, 119, 167, 192, 409
HapII	CCGG	3 cut(s)	153, 677, 876
Hin1I	GRCGYC	1 cut(s)	147
Hin1II	CATG	3 cut(s)	517, 653, 962
HincII	GTYRAC	2 cut(s)	145, 252
HindII	GTYRAC	2 cut(s)	145, 252
HindIII	AAGCTT	1 cut(s)	280
HinfI	GANTC	5 cut(s)	9, 517, 616, 752, 935
HpaII	CCGG	3 cut(s)	153, 677, 876
HphI	GGTGA	3 cut(s)	142, 853, 969
Hpy166II	GTNNAC	4 cut(s)	145, 252, 635, 844
Hpy188I	TCNGA	2 cut(s)	186, 615
Hpy188III	TCNNGA	3 cut(s)	98, 354, 666
Hpy8I	GTNNAC	4 cut(s)	145, 252, 635, 844
Hpy99I	CGWCG	2 cut(s)	104, 149
HpyAV	CCTTC	5 cut(s)	178, 210, 216, 510, 706
HpyCH4III	ACNGT	3 cut(s)	142, 526, 1001
HpyCH4IV	ACGT	2 cut(s)	147, 463
HpyCH4V	TGCA	5 cut(s)	263, 350, 431, 533, 683
HpyF10VI	GCNNNNNNNGC	4 cut(s)	48, 113, 173, 885
HpyF3I	CTNAG	5 cut(s)	183, 228, 435, 578, 612
HpySE526I	ACGT	2 cut(s)	147, 463
Hsp92I	GRCGYC	1 cut(s)	147
Hsp92II	CATG	3 cut(s)	517, 653, 962
Kzo9I	GATC	3 cut(s)	186, 550, 671
LmnI	GCTCC	5 cut(s)	22, 56, 234, 289, 439
Lsp1109I	GCAGC	2 cut(s)	443, 517
LweI	GCATC	2 cut(s)	359, 826
MaeI	CTAG	2 cut(s)	273, 1009
MaeII	ACGT	2 cut(s)	147, 463
MaeIII	GTNAC	4 cut(s)	109, 148, 936, 975
MalI	GATC	3 cut(s)	188, 552, 673
MbiI	CCGCTC	1 cut(s)	176
MboI	GATC	3 cut(s)	186, 550, 671
MboII	GAAGA	7 cut(s)	25, 84, 201, 400, 557, 560, 777
MflI	RGATCY	1 cut(s)	671
MhlI	GDGCHC	2 cut(s)	294, 365
MlsI	TGGCCA	1 cut(s)	74
MluCI	AATT	6 cut(s)	14, 29, 56, 383, 458, 594
MluNI	TGGCCA	1 cut(s)	74
MlyI	GAGTC	3 cut(s)	610, 761, 944
MmeI	TCCRAC	2 cut(s)	644, 927
Mox20I	TGGCCA	1 cut(s)	74
MroXI	GAANNNNTTC	3 cut(s)	476, 495, 954
MscI	TGGCCA	1 cut(s)	74
MseI	TTAA	1 cut(s)	870
MslI	CAYNNNNRTG	2 cut(s)	579, 957
Msp20I	TGGCCA	1 cut(s)	74
MspA1I	CMGCKG	2 cut(s)	434, 602
MspI	CCGG	3 cut(s)	153, 677, 876
MspR9I	CCNGG	3 cut(s)	656, 678, 849
MvaI	CCWGG	2 cut(s)	656, 849
MwoI	GCNNNNNNNGC	4 cut(s)	48, 113, 173, 885
NciI	CCSGG	1 cut(s)	678
NdeII	GATC	3 cut(s)	186, 550, 671
NlaIII	CATG	3 cut(s)	517, 653, 962
NlaIV	GGNNCC	1 cut(s)	498
NmuCI	GTSAC	4 cut(s)	109, 148, 936, 975
PaeR7I	CTCGAG	1 cut(s)	666
PasI	CCCWGGG	1 cut(s)	848
PceI	AGGCCT	3 cut(s)	80, 167, 409
PcsI	WCGNNNNNNNCGW	1 cut(s)	105
PdmI	GAANNNNTTC	3 cut(s)	476, 495, 954
PfeI	GAWTC	2 cut(s)	9, 517
PflMI	CCANNNNNTGG	1 cut(s)	655
PfoI	TCCNGGA	1 cut(s)	654
PinAI	ACCGGT	1 cut(s)	152
PkrI	GCNGC	3 cut(s)	118, 433, 532
PleI	GAGTC	3 cut(s)	610, 760, 943
PpsI	GAGTC	3 cut(s)	610, 760, 943
Psp124BI	GAGCTC	1 cut(s)	294
Psp6I	CCWGG	2 cut(s)	654, 847
PspGI	CCWGG	2 cut(s)	654, 847
PspN4I	GGNNCC	1 cut(s)	498
PstNI	CAGNNNCTG	1 cut(s)	530
PsuI	RGATCY	1 cut(s)	671
PvuII	CAGCTG	2 cut(s)	434, 602
RsaI	GTAC	1 cut(s)	884
RsaNI	GTAC	1 cut(s)	883
RseI	CAYNNNNRTG	2 cut(s)	579, 957
SacI	GAGCTC	1 cut(s)	294
SalI	GTCGAC	1 cut(s)	143
SaqAI	TTAA	1 cut(s)	870
SatI	GCNGC	3 cut(s)	117, 432, 531
Sau3AI	GATC	3 cut(s)	186, 550, 671
ScaI	AGTACT	1 cut(s)	884
SchI	GAGTC	3 cut(s)	610, 761, 944
ScrFI	CCNGG	3 cut(s)	656, 678, 849
SduI	GDGCHC	2 cut(s)	294, 365
SfaNI	GCATC	2 cut(s)	359, 826
SfcI	CTRYAG	1 cut(s)	759
Sfr274I	CTCGAG	1 cut(s)	666
SlaI	CTCGAG	1 cut(s)	666
SmiMI	CAYNNNNRTG	2 cut(s)	579, 957
SmlI	CTYRAG	1 cut(s)	666
SmoI	CTYRAG	1 cut(s)	666
SpeI	ACTAGT	1 cut(s)	272
Sse9I	AATT	6 cut(s)	14, 29, 56, 383, 458, 594
SseBI	AGGCCT	3 cut(s)	80, 167, 409
SsiI	CCGC	4 cut(s)	116, 174, 765, 839
SspMI	CTAG	2 cut(s)	273, 1009
SstI	GAGCTC	1 cut(s)	294
StuI	AGGCCT	3 cut(s)	80, 167, 409
StyD4I	CCNGG	3 cut(s)	654, 676, 847
StyI	CCWWGG	1 cut(s)	75
TaaI	ACNGT	3 cut(s)	142, 526, 1001
TaiI	ACGT	2 cut(s)	150, 466
TaqI	TCGA	4 cut(s)	99, 144, 625, 667
TasI	AATT	6 cut(s)	14, 29, 56, 383, 458, 594
TatI	WGTACW	1 cut(s)	882
TauI	GCSGC	1 cut(s)	119
TfiI	GAWTC	2 cut(s)	9, 517
Tru1I	TTAA	1 cut(s)	870
Tru9I	TTAA	1 cut(s)	870
TscAI	CASTG	2 cut(s)	236, 370
TseFI	GTSAC	4 cut(s)	109, 148, 936, 975
TseI	GCWGC	2 cut(s)	431, 530
Tsp45I	GTSAC	4 cut(s)	109, 148, 936, 975
TspDTI	ATGAA	3 cut(s)	461, 530, 947
TspRI	CASTG	2 cut(s)	236, 370
Van91I	CCANNNNNTGG	1 cut(s)	655
XagI	CCTNNNNNAGG	1 cut(s)	504
XapI	RAATTY	4 cut(s)	14, 29, 56, 594
XhoI	CTCGAG	1 cut(s)	666
XmiI	GTMKAC	1 cut(s)	144
XmnI	GAANNNNTTC	3 cut(s)	476, 495, 954
XspI	CTAG	2 cut(s)	273, 1009
ZraI	GACGTC	1 cut(s)	148
ZrmI	AGTACT	1 cut(s)	884

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.