Rh2AG242200

Ras-related protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
26402660 .. 26405475
2816 bp
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UTR
Exon/CDS
Intron
Rh2AG242200.1

Sequence Viewer

Length: 510 bp
ATGGCGACGGTATCCCCTCTGGCGAAATACAAGCTCGTCTTCCTCGGCGATCAGTCCGTCGGCAAAACCAGCATCATCACCCGCTTCATGTATGACAAATTCGATTCAACCTATCAGGCTACGATTGGAATTGATTTTCTGTCGAAAACGATGTACCTTGAAGATCGGACAGTTCGTTTGCAGCTTTGGGATACAGCAGGGCAAGAGAGGTTTAGGAGTCTCATTCCAAGCTACATCAGGGATTCTTCTGTTGCAGTAATCGTCTATGATGTAGCTAATAGACAATCATTTCTGAACACTAATAAATGGATTGAAGAAGTACGAACAGAACGGGGTACTGATGTCATTATCGTGCTTGTTGGGAACAAAACTGATCTCGTTGATAAGAGACAAGTTTCTATAGAGGAAGGAGATTCCAAATCTCGTGAGTTTGGAGTCATGTTCATAGAAACCAGCGCCAAAGCAGGATTCAATATCAAGGTAAAAATACACAAACTCCTGATTCCTTAG

Protein Analysis

169

Amino Acids

19.28

Weight (kDa)

9.07

Isoelectric Point (pI)

50.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Arf PF00025 9 - 130 1.6e-14 ADP-ribosylation factor family
Ras PF00071 11 - 165 4.2e-56 Ras family
Roc PF08477 11 - 125 6.9e-38 Ras of Complex, Roc, domain of DAPkinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011740)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 82
AcsI RAATTY 1 cut(s) 98
AfaI GTAC 3 cut(s) 155, 321, 337
AgsI TTSAA 4 cut(s) 108, 161, 314, 472
AjuI GAANNNNNNNTTGG 2 cut(s) 452, 484
AluBI AGCT 4 cut(s) 34, 184, 231, 275
AluI AGCT 4 cut(s) 34, 184, 231, 275
Alw26I GTCTC 2 cut(s) 224, 382
ApeKI GCWGC 1 cut(s) 181
ApoI RAATTY 1 cut(s) 98
ArsI GACNNNNNNTTYG 2 cut(s) 160, 192
AspLEI GCGC 1 cut(s) 458
AsuHPI GGTGA 1 cut(s) 70
BaeI ACNNNNGTAYC 2 cut(s) 327, 360
BauI CACGAG 1 cut(s) 423
BbsI GAAGAC 1 cut(s) 31
BbvI GCAGC 1 cut(s) 193
BciVI GTATCC 2 cut(s) 22, 184
BcoDI GTCTC 2 cut(s) 224, 382
BfmI CTRYAG 1 cut(s) 399
BfoI RGCGCY 1 cut(s) 459
BfuI GTATCC 2 cut(s) 22, 184
BisI GCNGC 1 cut(s) 182
BlsI GCNGC 1 cut(s) 183
BmsI GCATC 1 cut(s) 81
BpiI GAAGAC 1 cut(s) 31
BsaJI CCNNGG 1 cut(s) 43
BsaXI ACNNNNNCTCC 2 cut(s) 480, 510
BseDI CCNNGG 1 cut(s) 43
BseXI GCAGC 1 cut(s) 193
BsmAI GTCTC 2 cut(s) 224, 382
Bsp143I GATC 3 cut(s) 49, 163, 373
BspACI CCGC 1 cut(s) 82
BssECI CCNNGG 1 cut(s) 43
BssMI GATC 3 cut(s) 49, 163, 373
BssSI CACGAG 1 cut(s) 423
Bst2BI CACGAG 1 cut(s) 423
Bst4CI ACNGT 2 cut(s) 10, 172
BstDEI CTNAG 1 cut(s) 507
BstH2I RGCGCY 1 cut(s) 459
BstHHI GCGC 1 cut(s) 458
BstKTI GATC 3 cut(s) 52, 166, 376
BstMAI GTCTC 2 cut(s) 224, 382
BstMBI GATC 3 cut(s) 49, 163, 373
BstMWI GCNNNNNNNGC 1 cut(s) 69
BstSFI CTRYAG 1 cut(s) 399
BstV1I GCAGC 1 cut(s) 193
BstV2I GAAGAC 1 cut(s) 31
BsuI GTATCC 2 cut(s) 22, 184
CfoI GCGC 1 cut(s) 458
Csp6I GTAC 3 cut(s) 154, 320, 336
CviAII CATG 2 cut(s) 88, 439
CviJI RGCY 5 cut(s) 34, 119, 184, 231, 275
CviKI_1 RGCY 5 cut(s) 34, 119, 184, 231, 275
CviQI GTAC 3 cut(s) 154, 320, 336
DdeI CTNAG 1 cut(s) 507
DpnI GATC 3 cut(s) 51, 165, 375
DpnII GATC 3 cut(s) 49, 163, 373
FaeI CATG 2 cut(s) 91, 442
FaiI YATR 6 cut(s) 89, 93, 267, 401, 440, 446
FalI AAGNNNNNCTT 2 cut(s) 23, 55
FatI CATG 2 cut(s) 87, 438
FauI CCCGC 1 cut(s) 89
Fnu4HI GCNGC 1 cut(s) 182
Fsp4HI GCNGC 1 cut(s) 182
GlaI GCGC 1 cut(s) 457
GluI GCNGC 1 cut(s) 182
HaeII RGCGCY 1 cut(s) 459
HhaI GCGC 1 cut(s) 458
Hin1II CATG 2 cut(s) 91, 442
Hin6I GCGC 1 cut(s) 456
HinP1I GCGC 1 cut(s) 456
HinfI GANTC 7 cut(s) 104, 217, 242, 413, 435, 468, 502
HphI GGTGA 1 cut(s) 70
Hpy188I TCNGA 2 cut(s) 168, 294
Hpy188III TCNNGA 2 cut(s) 425, 499
Hpy99I CGWCG 2 cut(s) 10, 62
HpyAV CCTTC 1 cut(s) 401
HpyCH4III ACNGT 2 cut(s) 10, 172
HpyCH4V TGCA 2 cut(s) 181, 254
HpyF10VI GCNNNNNNNGC 1 cut(s) 69
HpyF3I CTNAG 1 cut(s) 507
Hsp92II CATG 2 cut(s) 91, 442
HspAI GCGC 1 cut(s) 456
Kzo9I GATC 3 cut(s) 49, 163, 373
LpnPI CCDG 7 cut(s) 5, 82, 101, 183, 223, 450, 466
Lsp1109I GCAGC 1 cut(s) 193
LweI GCATC 1 cut(s) 81
MalI GATC 3 cut(s) 51, 165, 375
MboI GATC 3 cut(s) 49, 163, 373
MboII GAAGA 4 cut(s) 31, 173, 237, 326
MluCI AATT 2 cut(s) 98, 129
MlyI GAGTC 2 cut(s) 226, 444
MnlI CCTC 4 cut(s) 27, 53, 201, 397
MslI CAYNNNNRTG 1 cut(s) 350
MwoI GCNNNNNNNGC 1 cut(s) 69
NdeII GATC 3 cut(s) 49, 163, 373
NlaIII CATG 2 cut(s) 91, 442
NmeAIII GCCGAG 1 cut(s) 24
PcsI WCGNNNNNNNCGW 1 cut(s) 172
PfeI GAWTC 5 cut(s) 104, 242, 413, 468, 502
PkrI GCNGC 1 cut(s) 183
PleI GAGTC 2 cut(s) 225, 443
PpsI GAGTC 2 cut(s) 225, 443
RsaI GTAC 3 cut(s) 155, 321, 337
RsaNI GTAC 3 cut(s) 154, 320, 336
RseI CAYNNNNRTG 1 cut(s) 350
SatI GCNGC 1 cut(s) 182
Sau3AI GATC 3 cut(s) 49, 163, 373
SchI GAGTC 2 cut(s) 226, 444
SetI ASST 8 cut(s) 36, 113, 159, 186, 212, 233, 277, 483
SfaNI GCATC 1 cut(s) 81
SfcI CTRYAG 1 cut(s) 399
SmiMI CAYNNNNRTG 1 cut(s) 350
Sse9I AATT 2 cut(s) 98, 129
SsiI CCGC 1 cut(s) 82
TaaI ACNGT 2 cut(s) 10, 172
TaqI TCGA 2 cut(s) 102, 143
TasI AATT 2 cut(s) 98, 129
TfiI GAWTC 5 cut(s) 104, 242, 413, 468, 502
TseI GCWGC 1 cut(s) 181
TspDTI ATGAA 2 cut(s) 76, 433
TspGWI ACGGA 1 cut(s) 46
XapI RAATTY 1 cut(s) 98
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.