Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0005134

Physical Location & Seq

Genomic Coordinates Forward (+)

39478870 .. 39486531

Gene Structure 7662 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG310200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGGGAAGGAGATGTAGGATTTGGTGGCCGAAGCAGCTCTCATTCCCCAAATCAGACTCCAATTTCTTGCTTGGCTGGTTCGTTTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTCTCGACGTCGTCGTAGCTTTCGCCTGCACCCAACTCGCGTTTTCCGATCCCACAAAAAGCCTCCAGGGAATTCTTCACGAAACAAATGGAAAGATGCCCGTATTGCTTCAGGATAGGTCAAAGTTGTGTGTTCTGGGTCAGTTTGCGTCAGTTGGAACTGAACAAGATGATCATTATCAGTCATCTTCTTGTGGATGCCACAAGCTCAGTGGGTCGTTAGAACAATGCAGGCAATCTTTTGTGGGAAACAGCTTTTGGATCCACATGTTACGTGAGGAGCAACAACAATTTGGGAAAGGCATTACTTGGATTCCTAGAATGCAGCACATTCATTGGAATGGGGAGATAGTGTCTCGATGTCATGTCCACCTGATATTCTATGAGACTCCCACCTATGGAGCTCACCATTTCTCATTACGGCTTTGGAATTCTTTGGACCAAGCCAAGGCTCCTTTGAGAAAACCCAAGTGGGTTCATGAACTCAACCAAAAGCAGCCACTTCTTGATTTGGATACAGTCATTCTGGCAATTAATAGCGCCTCTGCCGCTGACAATTCTTTCAAAAGATGCTTGGGTGCCAAGAAATCTTTTGTTCGCTTTTCCATTGTTTACATGTTTCTTGGCTTCATATGGAAGCTATTTTCTGTGCTTGTAGCTTCATTATCGACTTTATTCTACGTCATTCTTCAGTTTCTGTATACGGTTCTGAATTATGCATCAGACTCTTGGACATACATTATATTAGTAAAGGTATTCAGCAGTGCAAGGATAAATATGAGAATCCGTTTTTCTCAGATGTTGTATTGGCCAATCTTTCTTCAAGATAATTGCATGAGGTCTCAATCAAGTGTAGAATATGCAGAGAAAGCCGCATTGCTTAAGCATTCCATGTGGTCAAGTTTAGCTGTCGATGTTCTTTTGGGAAACTTGATTGGTTTGGCACTGTTGTATCATGCAGAATCTGTTTGCATATTGGTTCTCAAATTTTCCAGTGACGTTACCAATGAGTTGTTGCGCTCTGGTTGTGTGTGGTTGATGGGAGTCCCTGCAGGTTTCAAGTTAAACACGGAATTAGCAGGAGTTCTTGGGATGATTTCTCTAACTGCTATCCAGATTTGGTCTACCATTTGGATCTTTTTGGGTTTTCACTTCCTTTATGTCATTAGAGGACTTGCCATATCCGGGATCATTTTTGGGTTGACTATACCTGCTGCTTTGATCATAGACTTGATTGCACTGGTAACATTACATGTGTCTACTCTTCATTGGTTGATATCTCTTTTGTATTCAACTCAGATACAGGCATTAGCAGCTTTGTGGCGCCTTTTCAGGGGTCGAAAGTGGAATCCTCTTCGTCAGAGATTAGATAGTTATGACTACACTGTCAAGCAGCACATAGTTGGATCTCTTCTGTTCACACCACTCTTGCTTCTATTGCCCACGACTTCTGTTTTCTATATCTTCTTTACCATTATGAACACAACCATCAGCTTAATCTGTATACTGATTGAAGTCACTATATCAGTTATTCATGCTACTCCATATATCAAAGTTTTCCTGTGGTTGGTCAGGCCAAGAAGATTCCCTTCTGGGATATGGTTTGAAATCAAATCTGTTTGGAGTCAGGGCCTTGATTCTTGTGAGGATATGGATTCACAGGTAGCTAATATGCAGAGTAAAAAAGACAGAACCGAAGAAAAACCTTCTGTTGTGGTTTCGTTTCTTCATAGCAACTTCTTGACTGTAGGACAATTAATTTTGCCTCACTACACCAAGGTTCTTTCTGGGAAACCTCGAACCTTGGTCGCTACAGCAGCATATGGAGTTCTCACTGGCAGAAGGATTCCATCAACAATTGGAACTGATCTCCCAACATTTCCATGGATGATAATTCCCTGCAAAGAGTTTTGGCGCCTCTGCTACGATTCAATTCTCGAATGCTACAGAACGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000506 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006464 GO:0006497 GO:0006505 GO:0006506 GO:0006629 GO:0006643 GO:0006644 GO:0006650 GO:0006661 GO:0006664 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009059 GO:0009247 GO:0009987 GO:0012505 GO:0016020 GO:0019538 GO:0019637 GO:0031984 GO:0032991 GO:0034645 GO:0036211 GO:0042157 GO:0042158 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046467 GO:0046474 GO:0046486 GO:0046488 GO:0071704 GO:0090407 GO:0098796 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1903509 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00563 ko01100 map00563 map01100

Pfam Domains

Protein Families

Gpi1

Protein Analysis

688

Amino Acids

78.28

Weight (kDa)

9.25

Isoelectric Point (pI)

44.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gpi1	PF05024	296 - 567	1.7e-78	N-acetylglucosaminyl transferase component (Gpi1)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0005134)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57170 AT3G57170
fragaria_vesca	FvH4_6g24900 FvH4_6g24900 FvH4_6g24900 FvH4_6g24900 FvH4_6g24900 FvH4_6g24900 FvH4_6g24900 FvH4_6g24900
malus_domestica	MD07G1151600.v1.1 MD12G1089200.v1.1 MD14G1081800.v1.1
prunus_persica	Prupe.4G274500_v2.0.a1 Prupe.5G000500_v2.0.a1
pyrus_communis	pycom07g15000 pycom12g07440 pycom14g07110
rosa_chinensis	RchiOBHm_Chr2g0124601
rosa_laevigata	RLG00000018807
rosa_multiflora	Rmu_sc0042054.1_g000001
rosa_roxburghii	Rroxscaffold_2G00119850
rosa_rugosa	Rorug02G0251500 Rorug02G0251500
rosa_samantha	Rh2AG310200 Rh2BG318700 Rh2CG297100 Rh2CG302000 Rh2DG333900
rosa_wichuraiana	Rw2G025090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1496
AatII	GACGTC	1 cut(s)	123
Acc36I	ACCTGC	2 cut(s)	1154, 1330
AccB1I	GGYRCC	3 cut(s)	689, 1434, 2025
AccI	GTMKAC	4 cut(s)	812, 1235, 1370, 1615
AccII	CGCG	1 cut(s)	152
AciI	CCGC	2 cut(s)	660, 984
AclWI	GGATC	6 cut(s)	155, 367, 380, 1253, 1307, 1525
AcoI	YGGCCR	2 cut(s)	26, 920
AcsI	RAATTY	3 cut(s)	183, 541, 1097
AcuI	CTGAAG	2 cut(s)	206, 785
AcyI	GRCGYC	3 cut(s)	120, 1435, 2026
AfiI	CCNNNNNNNGG	5 cut(s)	509, 559, 1296, 1444, 1678
AflII	CTTAAG	1 cut(s)	992
AflIII	ACRYGT	3 cut(s)	378, 726, 1363
AgsI	TTSAA	7 cut(s)	676, 935, 1171, 1404, 1625, 1718, 2043
AjnI	CCWGG	1 cut(s)	177
AjuI	GAANNNNNNNTTGG	2 cut(s)	352, 384
Alw21I	GWGCWC	1 cut(s)	517
Alw26I	GTCTC	3 cut(s)	471, 491, 957
AlwI	GGATC	6 cut(s)	155, 367, 380, 1253, 1307, 1525
AlwNI	CAGNNNCTG	2 cut(s)	808, 1076
AoxI	GGCC	4 cut(s)	26, 920, 1685, 1741
ApeKI	GCWGC	7 cut(s)	34, 436, 607, 1325, 1424, 1504, 1928
ApoI	RAATTY	3 cut(s)	183, 541, 1097
AseI	ATTAAT	2 cut(s)	645, 1868
AspLEI	GCGC	4 cut(s)	653, 1131, 1437, 2028
AspS9I	GGNCC	2 cut(s)	550, 1741
AsuC2I	CCSGG	1 cut(s)	1297
AsuHPI	GGTGA	1 cut(s)	509
AvaII	GGWCC	1 cut(s)	550
BaeI	ACNNNNGTAYC	2 cut(s)	1046, 1079
BalI	TGGCCA	1 cut(s)	922
BamHI	GGATCC	1 cut(s)	372
BanI	GGYRCC	3 cut(s)	689, 1434, 2025
BanII	GRGCYC	1 cut(s)	517
Bbv12I	GWGCWC	1 cut(s)	517
BbvI	GCAGC	7 cut(s)	46, 448, 619, 1312, 1436, 1516, 1940
BccI	CCATC	3 cut(s)	1144, 1607, 1969
BceAI	ACGGC	1 cut(s)	548
BcgI	CGANNNNNNTGC	2 cut(s)	130, 164
BciT130I	CCWGG	1 cut(s)	179
BciVI	GTATCC	1 cut(s)	619
BclI	TGATCA	2 cut(s)	283, 1332
BcnI	CCSGG	1 cut(s)	1297
BcoDI	GTCTC	3 cut(s)	471, 491, 957
BfaI	CTAG	1 cut(s)	429
BfmI	CTRYAG	4 cut(s)	1161, 1857, 1923, 2056
BfoI	RGCGCY	3 cut(s)	654, 1438, 2029
BfrI	CTTAAG	1 cut(s)	992
BfuAI	ACCTGC	2 cut(s)	1154, 1330
BfuI	GTATCC	1 cut(s)	619
BisI	GCNGC	9 cut(s)	35, 437, 608, 660, 984, 1326, 1425, 1505, 1929
BlsI	GCNGC	9 cut(s)	36, 438, 609, 661, 985, 1327, 1426, 1506, 1930
Bme1390I	CCNGG	2 cut(s)	179, 1297
Bme18I	GGWCC	1 cut(s)	550
BmgT120I	GGNCC	2 cut(s)	550, 1741
BmiI	GGNNCC	5 cut(s)	374, 564, 691, 1436, 2027
BmrFI	CCNGG	2 cut(s)	179, 1297
BmsI	GCATC	4 cut(s)	198, 299, 671, 839
BpmI	CTGGAG	1 cut(s)	161
BpuMI	CCSGG	1 cut(s)	1297
BsaAI	YACGTR	1 cut(s)	386
BsaBI	GATNNNNATC	1 cut(s)	288
BsaHI	GRCGYC	3 cut(s)	120, 1435, 2026
BsaI	GGTCTC	1 cut(s)	957
BsaJI	CCNNGG	5 cut(s)	178, 558, 1887, 1914, 1994
BsaXI	ACNNNNNCTCC	2 cut(s)	449, 479
Bsc4I	CCNNNNNNNGG	5 cut(s)	509, 559, 1296, 1444, 1678
Bse1I	ACTGG	3 cut(s)	1104, 1356, 1951
Bse3DI	GCAATG	1 cut(s)	986
Bse8I	GATNNNNATC	1 cut(s)	288
BseBI	CCWGG	1 cut(s)	179
BseDI	CCNNGG	5 cut(s)	178, 558, 1887, 1914, 1994
BseGI	GGATG	3 cut(s)	314, 1209, 2004
BseJI	GATNNNNATC	1 cut(s)	288
BseLI	CCNNNNNNNGG	5 cut(s)	509, 559, 1296, 1444, 1678
BseMI	GCAATG	1 cut(s)	986
BseMII	CTCAG	3 cut(s)	334, 920, 1421
BseNI	ACTGG	3 cut(s)	1104, 1356, 1951
BseRI	GAGGAG	5 cut(s)	79, 82, 85, 88, 404
BseXI	GCAGC	7 cut(s)	46, 448, 619, 1312, 1436, 1516, 1940
BsgI	GTGCAG	1 cut(s)	124
Bsh1236I	CGCG	1 cut(s)	152
BshFI	GGCC	4 cut(s)	28, 922, 1687, 1743
BshNI	GGYRCC	3 cut(s)	689, 1434, 2025
BsiHKAI	GWGCWC	1 cut(s)	517
BsiSI	CCGG	1 cut(s)	1296
BslFI	GGGAC	1 cut(s)	1142
BslI	CCNNNNNNNGG	5 cut(s)	509, 559, 1296, 1444, 1678
BsmAI	GTCTC	3 cut(s)	471, 491, 957
BsmFI	GGGAC	1 cut(s)	1142
BsmI	GAATGC	3 cut(s)	438, 997, 2057
BsnI	GGCC	4 cut(s)	28, 922, 1687, 1743
Bso31I	GGTCTC	1 cut(s)	957
Bsp1286I	GDGCHC	1 cut(s)	517
Bsp143I	GATC	8 cut(s)	160, 283, 372, 1245, 1299, 1332, 1517, 1978
Bsp19I	CCATGG	1 cut(s)	1994
BspACI	CCGC	2 cut(s)	660, 984
BspANI	GGCC	4 cut(s)	28, 922, 1687, 1743
BspCNI	CTCAG	3 cut(s)	333, 919, 1420
BspFNI	CGCG	1 cut(s)	152
BspHI	TCATGA	1 cut(s)	589
BspLI	GGNNCC	5 cut(s)	374, 564, 691, 1436, 2027
BspMAI	CTGCAG	1 cut(s)	1165
BspMI	ACCTGC	2 cut(s)	1154, 1330
BspPI	GGATC	6 cut(s)	155, 367, 380, 1253, 1307, 1525
BspT107I	GGYRCC	3 cut(s)	689, 1434, 2025
BspTI	CTTAAG	1 cut(s)	992
BspTNI	GGTCTC	1 cut(s)	957
BsrDI	GCAATG	1 cut(s)	986
BsrI	ACTGG	3 cut(s)	1104, 1356, 1951
BssECI	CCNNGG	5 cut(s)	178, 558, 1887, 1914, 1994
BssMI	GATC	8 cut(s)	160, 283, 372, 1245, 1299, 1332, 1517, 1978
BssNAI	GTATAC	2 cut(s)	813, 1616
BssNI	GRCGYC	3 cut(s)	120, 1435, 2026
BssT1I	CCWWGG	4 cut(s)	558, 1887, 1914, 1994
Bst1107I	GTATAC	2 cut(s)	813, 1616
Bst2UI	CCWGG	1 cut(s)	179
Bst4CI	ACNGT	5 cut(s)	631, 817, 1059, 1498, 1858
Bst6I	CTCTTC	4 cut(s)	106, 1380, 1470, 1527
BstACI	GRCGYC	3 cut(s)	120, 1435, 2026
BstAFI	CTTAAG	1 cut(s)	992
BstBAI	YACGTR	1 cut(s)	386
BstC8I	GCNNGC	2 cut(s)	139, 344
BstDEI	CTNAG	3 cut(s)	320, 906, 1407
BstDSI	CCRYGG	1 cut(s)	1994
BstF5I	GGATG	3 cut(s)	314, 1209, 2004
BstFNI	CGCG	1 cut(s)	152
BstH2I	RGCGCY	3 cut(s)	654, 1438, 2029
BstHHI	GCGC	4 cut(s)	653, 1131, 1437, 2028
BstKTI	GATC	8 cut(s)	163, 286, 375, 1248, 1302, 1335, 1520, 1981
BstMAI	GTCTC	3 cut(s)	471, 491, 957
BstMBI	GATC	8 cut(s)	160, 283, 372, 1245, 1299, 1332, 1517, 1978
BstMWI	GCNNNNNNNGC	7 cut(s)	34, 217, 659, 980, 1424, 1549, 1928
BstNI	CCWGG	1 cut(s)	179
BstNSI	RCATGY	3 cut(s)	382, 730, 1367
BstSCI	CCNGG	2 cut(s)	177, 1295
BstSFI	CTRYAG	4 cut(s)	1161, 1857, 1923, 2056
BstUI	CGCG	1 cut(s)	152
BstV1I	GCAGC	7 cut(s)	46, 448, 619, 1312, 1436, 1516, 1940
BstX2I	RGATCY	3 cut(s)	372, 1245, 1517
BstYI	RGATCY	3 cut(s)	372, 1245, 1517
BstZ17I	GTATAC	2 cut(s)	813, 1616
BsuI	GTATCC	1 cut(s)	619
BsuRI	GGCC	4 cut(s)	28, 922, 1687, 1743
BtgI	CCRYGG	1 cut(s)	1994
BtsCI	GGATG	3 cut(s)	314, 1209, 2004
BtsI	GCAGTG	1 cut(s)	880
BtsIMutI	CAGTG	7 cut(s)	328, 880, 1055, 1111, 1349, 1494, 1944
BveI	ACCTGC	2 cut(s)	1154, 1330
Cac8I	GCNNGC	2 cut(s)	139, 344
CaiI	CAGNNNCTG	2 cut(s)	808, 1076
CciI	TCATGA	1 cut(s)	589
CfoI	GCGC	4 cut(s)	653, 1131, 1437, 2028
Cfr13I	GGNCC	2 cut(s)	550, 1741
CseI	GACGC	1 cut(s)	249
CspCI	CAANNNNNGTGG	2 cut(s)	304, 339
DdeI	CTNAG	3 cut(s)	320, 906, 1407
DinI	GGCGCC	2 cut(s)	1436, 2027
DpnI	GATC	8 cut(s)	162, 285, 374, 1247, 1301, 1334, 1519, 1980
DpnII	GATC	8 cut(s)	160, 283, 372, 1245, 1299, 1332, 1517, 1978
DrdI	GACNNNNNNGTC	1 cut(s)	1496
DseDI	GACNNNNNNGTC	1 cut(s)	1496
EaeI	YGGCCR	2 cut(s)	26, 920
Eam1104I	CTCTTC	4 cut(s)	106, 1380, 1470, 1527
EarI	CTCTTC	4 cut(s)	106, 1380, 1470, 1527
Ecl136II	GAGCTC	1 cut(s)	515
Eco130I	CCWWGG	4 cut(s)	558, 1887, 1914, 1994
Eco24I	GRGCYC	1 cut(s)	517
Eco31I	GGTCTC	1 cut(s)	957
Eco32I	GATATC	1 cut(s)	1389
Eco47I	GGWCC	1 cut(s)	550
Eco53kI	GAGCTC	1 cut(s)	515
Eco57I	CTGAAG	2 cut(s)	206, 785
EcoICRI	GAGCTC	1 cut(s)	515
EcoO109I	RGGNCCY	1 cut(s)	1741
EcoRI	GAATTC	2 cut(s)	183, 541
EcoRII	CCWGG	1 cut(s)	177
EcoRV	GATATC	1 cut(s)	1389
EcoT14I	CCWWGG	4 cut(s)	558, 1887, 1914, 1994
EcoT22I	ATGCAT	1 cut(s)	832
EcoT38I	GRGCYC	1 cut(s)	517
EgeI	GGCGCC	2 cut(s)	1436, 2027
EheI	GGCGCC	2 cut(s)	1436, 2027
ErhI	CCWWGG	4 cut(s)	558, 1887, 1914, 1994
FalI	AAGNNNNNCTT	2 cut(s)	1684, 1716
FaqI	GGGAC	1 cut(s)	1142
FauNDI	CATATG	2 cut(s)	743, 1933
FbaI	TGATCA	2 cut(s)	283, 1332
FblI	GTMKAC	4 cut(s)	812, 1235, 1370, 1615
Fnu4HI	GCNGC	9 cut(s)	35, 437, 608, 660, 984, 1326, 1425, 1505, 1929
FokI	GGATG	3 cut(s)	321, 1216, 2011
FriOI	GRGCYC	1 cut(s)	517
Fsp4HI	GCNGC	9 cut(s)	35, 437, 608, 660, 984, 1326, 1425, 1505, 1929
FspBI	CTAG	1 cut(s)	429
GlaI	GCGC	4 cut(s)	652, 1130, 1436, 2027
GluI	GCNGC	9 cut(s)	35, 437, 608, 660, 984, 1326, 1425, 1505, 1929
GsuI	CTGGAG	1 cut(s)	161
HaeII	RGCGCY	3 cut(s)	654, 1438, 2029
HaeIII	GGCC	4 cut(s)	28, 922, 1687, 1743
HapII	CCGG	1 cut(s)	1296
HgaI	GACGC	1 cut(s)	249
HhaI	GCGC	4 cut(s)	653, 1131, 1437, 2028
Hin1I	GRCGYC	3 cut(s)	120, 1435, 2026
Hin6I	GCGC	4 cut(s)	651, 1129, 1435, 2026
HinP1I	GCGC	4 cut(s)	651, 1129, 1435, 2026
HincII	GTYRAC	1 cut(s)	1314
HindII	GTYRAC	1 cut(s)	1314
HpaII	CCGG	1 cut(s)	1296
HphI	GGTGA	1 cut(s)	509
Hpy166II	GTNNAC	8 cut(s)	481, 724, 813, 1236, 1314, 1371, 1530, 1616
Hpy188I	TCNGA	7 cut(s)	55, 160, 822, 835, 909, 1410, 1473
Hpy8I	GTNNAC	8 cut(s)	481, 724, 813, 1236, 1314, 1371, 1530, 1616
Hpy99I	CGWCG	3 cut(s)	122, 125, 128
HpyAV	CCTTC	3 cut(s)	1710, 1827, 1947
HpyCH4III	ACNGT	5 cut(s)	631, 817, 1059, 1498, 1858
HpyCH4IV	ACGT	5 cut(s)	120, 385, 792, 1110, 2063
HpyF10VI	GCNNNNNNNGC	7 cut(s)	34, 217, 659, 980, 1424, 1549, 1928
HpyF3I	CTNAG	3 cut(s)	320, 906, 1407
HpySE526I	ACGT	5 cut(s)	120, 385, 792, 1110, 2063
Hsp92I	GRCGYC	3 cut(s)	120, 1435, 2026
HspAI	GCGC	4 cut(s)	651, 1129, 1435, 2026
KasI	GGCGCC	2 cut(s)	1434, 2025
Ksp22I	TGATCA	2 cut(s)	283, 1332
Kzo9I	GATC	8 cut(s)	160, 283, 372, 1245, 1299, 1332, 1517, 1978
LmnI	GCTCC	3 cut(s)	391, 512, 568
Lsp1109I	GCAGC	7 cut(s)	46, 448, 619, 1312, 1436, 1516, 1940
LweI	GCATC	4 cut(s)	198, 299, 671, 839
MaeI	CTAG	1 cut(s)	429
MaeII	ACGT	5 cut(s)	120, 385, 792, 1110, 2063
MaeIII	GTNAC	5 cut(s)	381, 1106, 1111, 1354, 1627
MalI	GATC	8 cut(s)	162, 285, 374, 1247, 1301, 1334, 1519, 1980
MboI	GATC	8 cut(s)	160, 283, 372, 1245, 1299, 1332, 1517, 1978
MfeI	CAATTG	1 cut(s)	1968
MflI	RGATCY	3 cut(s)	372, 1245, 1517
MhlI	GDGCHC	1 cut(s)	517
MlsI	TGGCCA	1 cut(s)	922
MluNI	TGGCCA	1 cut(s)	922
Mly113I	GGCGCC	2 cut(s)	1435, 2026
MlyI	GAGTC	5 cut(s)	50, 493, 830, 1164, 1744
MmeI	TCCRAC	2 cut(s)	247, 1495
Mox20I	TGGCCA	1 cut(s)	922
Mph1103I	ATGCAT	1 cut(s)	832
MscI	TGGCCA	1 cut(s)	922
MseI	TTAA	5 cut(s)	645, 993, 1175, 1607, 1868
MslI	CAYNNNNRTG	2 cut(s)	450, 1993
Msp20I	TGGCCA	1 cut(s)	922
MspA1I	CMGCKG	1 cut(s)	662
MspCI	CTTAAG	1 cut(s)	992
MspI	CCGG	1 cut(s)	1296
MspR9I	CCNGG	2 cut(s)	179, 1297
MunI	CAATTG	1 cut(s)	1968
Mva1269I	GAATGC	3 cut(s)	438, 997, 2057
MvaI	CCWGG	1 cut(s)	179
MvnI	CGCG	1 cut(s)	152
MwoI	GCNNNNNNNGC	7 cut(s)	34, 217, 659, 980, 1424, 1549, 1928
NarI	GGCGCC	2 cut(s)	1435, 2026
NciI	CCSGG	1 cut(s)	1297
NcoI	CCATGG	1 cut(s)	1994
NdeI	CATATG	2 cut(s)	743, 1933
NdeII	GATC	8 cut(s)	160, 283, 372, 1245, 1299, 1332, 1517, 1978
NlaIV	GGNNCC	5 cut(s)	374, 564, 691, 1436, 2027
NmuCI	GTSAC	2 cut(s)	1106, 1627
NsiI	ATGCAT	1 cut(s)	832
NspI	RCATGY	3 cut(s)	382, 730, 1367
PagI	TCATGA	1 cut(s)	589
PciI	ACATGT	3 cut(s)	378, 726, 1363
PcsI	WCGNNNNNNNCGW	2 cut(s)	123, 156
PctI	GAATGC	3 cut(s)	438, 997, 2057
PfeI	GAWTC	9 cut(s)	424, 894, 1073, 1459, 1695, 1748, 1766, 1957, 2039
PflFI	GACNNNGTC	1 cut(s)	122
PfoI	TCCNGGA	1 cut(s)	1295
PkrI	GCNGC	9 cut(s)	36, 438, 609, 661, 985, 1327, 1426, 1506, 1930
PleI	GAGTC	5 cut(s)	50, 493, 830, 1163, 1743
PluTI	GGCGCC	2 cut(s)	1438, 2029
PpsI	GAGTC	5 cut(s)	50, 493, 830, 1163, 1743
Ppu21I	YACGTR	1 cut(s)	386
PscI	ACATGT	3 cut(s)	378, 726, 1363
PshBI	ATTAAT	2 cut(s)	645, 1868
Psp124BI	GAGCTC	1 cut(s)	517
Psp6I	CCWGG	1 cut(s)	177
PspGI	CCWGG	1 cut(s)	177
PspN4I	GGNNCC	5 cut(s)	374, 564, 691, 1436, 2027
PspPI	GGNCC	2 cut(s)	550, 1741
PstI	CTGCAG	1 cut(s)	1165
PstNI	CAGNNNCTG	2 cut(s)	808, 1076
PsuI	RGATCY	3 cut(s)	372, 1245, 1517
PsyI	GACNNNGTC	1 cut(s)	122
RseI	CAYNNNNRTG	2 cut(s)	450, 1993
SacI	GAGCTC	1 cut(s)	517
SaqAI	TTAA	5 cut(s)	645, 993, 1175, 1607, 1868
SatI	GCNGC	9 cut(s)	35, 437, 608, 660, 984, 1326, 1425, 1505, 1929
Sau3AI	GATC	8 cut(s)	160, 283, 372, 1245, 1299, 1332, 1517, 1978
Sau96I	GGNCC	2 cut(s)	550, 1741
SbfI	CCTGCAGG	1 cut(s)	1165
SchI	GAGTC	5 cut(s)	50, 493, 830, 1164, 1744
ScrFI	CCNGG	2 cut(s)	179, 1297
SdaI	CCTGCAGG	1 cut(s)	1165
SduI	GDGCHC	1 cut(s)	517
SfaNI	GCATC	4 cut(s)	198, 299, 671, 839
SfcI	CTRYAG	4 cut(s)	1161, 1857, 1923, 2056
SfoI	GGCGCC	2 cut(s)	1436, 2027
SinI	GGWCC	1 cut(s)	550
SmiMI	CAYNNNNRTG	2 cut(s)	450, 1993
SmlI	CTYRAG	1 cut(s)	992
SmoI	CTYRAG	1 cut(s)	992
Sse8387I	CCTGCAGG	1 cut(s)	1165
SsiI	CCGC	2 cut(s)	660, 984
SspDI	GGCGCC	2 cut(s)	1434, 2025
SspMI	CTAG	1 cut(s)	429
SstI	GAGCTC	1 cut(s)	517
StyD4I	CCNGG	2 cut(s)	177, 1295
StyI	CCWWGG	4 cut(s)	558, 1887, 1914, 1994
TaaI	ACNGT	5 cut(s)	631, 817, 1059, 1498, 1858
TaiI	ACGT	5 cut(s)	123, 388, 795, 1113, 2066
TaqI	TCGA	7 cut(s)	117, 469, 779, 1023, 1450, 1909, 2049
TauI	GCSGC	2 cut(s)	662, 986
TfiI	GAWTC	9 cut(s)	424, 894, 1073, 1459, 1695, 1748, 1766, 1957, 2039
Tru1I	TTAA	5 cut(s)	645, 993, 1175, 1607, 1868
Tru9I	TTAA	5 cut(s)	645, 993, 1175, 1607, 1868
TscAI	CASTG	7 cut(s)	328, 880, 1062, 1111, 1356, 1501, 1951
TseFI	GTSAC	2 cut(s)	1106, 1627
TseI	GCWGC	7 cut(s)	34, 436, 607, 1325, 1424, 1504, 1928
Tsp45I	GTSAC	2 cut(s)	1106, 1627
TspDTI	ATGAA	9 cut(s)	434, 578, 606, 730, 762, 1367, 1604, 1634, 1829
TspGWI	ACGGA	2 cut(s)	887, 1196
TspRI	CASTG	7 cut(s)	328, 880, 1062, 1111, 1356, 1501, 1951
Tth111I	GACNNNGTC	1 cut(s)	122
Vha464I	CTTAAG	1 cut(s)	992
VpaK11BI	GGWCC	1 cut(s)	550
VspI	ATTAAT	2 cut(s)	645, 1868
XapI	RAATTY	3 cut(s)	183, 541, 1097
XceI	RCATGY	3 cut(s)	382, 730, 1367
XcmI	CCANNNNNNNNNTGG	2 cut(s)	320, 1992
XmiI	GTMKAC	4 cut(s)	812, 1235, 1370, 1615
XspI	CTAG	1 cut(s)	429
ZraI	GACGTC	1 cut(s)	121
Zsp2I	ATGCAT	1 cut(s)	832

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.