Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0005134

Physical Location & Seq

Genomic Coordinates Forward (+)

34245488 .. 34252819

Gene Structure 7332 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG297100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGGGAAGGAGATGTAGGATTTGGTGGCCGAAGCAGCTCTCATTCCCCAAATCAGACTCCAATTTCTTGCTTGGCTGGTTCGTTTCCTCCTCCTCTTCTTCTTCTTCTTCTCTCGACGTCGTCATAGCTTTCGCCTGCACCCAGCTCGCGTTTTCCGATCCCACAAAAAGCCTCCAGGGAATTCTTCACGAAACAAATGGAAAGATGCCCGTATTGCTTCAGGATAGGTCAAAGTTGTGTGTTCTGGGTCAGTTTGCGTCAGTTGGAACTGAACAAGATGATCATTATCAGTCATCTTCTTGTGGATGCCACAAGCTCAGTGGGTCGTTAGAACAATGCAGGCAATCTTTTGTGGGAAACAGCTTTTGGATCCACATGTTACGTGAGGATCAACAACAATTTGGGAAAGGCATTACTTGGATTCCTAGAATGCAGCACATTCATTGGAATGGGGAGATAGTGTCTCGATGTCATGTCCACCTGATATTCTATGAGACTCCCACCTATGGAGCTCACCATTTCTCATTACGGCTTTGGAATTCTTTGGACCAAGCCAAGGCTCCTTTGAGAAAACCCAAGTGGGTTCATGAACTCAACCAAAAGCAGCCACTTCTTGATTTGGATACAGTCATTCTGGCAATTAATAGTGCCTCTGCCGCTGACAATTCTTTCAAAAGATGCTTGGGTGCCAAGAAATCTTTTGTCCGCTTTTCCATTGTTTACATGTTTCTTGGCTTCATATGGAAGCTATTTTCTGTGCTTGTAGCTTCATTATCCACTTTATTCTACGTCATTCTTCAGTTTCTGTATACGCTTCTGAATTATGCATCAGACTCTTGGACATACATTATATTAGTAAAGGTATTCAGCTGTGCAAGGATAAATATGAGAATCCGTTTTTCTCAGATGTTGTATTGGCCAATCTTTCTTCAAGACAATTGCATGAGGTCTCAATCAAGTGTAGAATATGCAGAGAAAGCCGCATTGCTTAAGCATTCCATGTGGTCAAGTTTAGCTGTCGATGTTCTTTTGGGAAACTTGATTGGTTTGGCACTGTTGTATCATGCAGAATCTGTTAGCATATTGGTTCTCAAATTTTCCAGTGACGTTACCAATGAGTTGTTGCGCTCTGGTTGTGTGTGGTTGATGGGAGTCCCTGCAGGTTTCAAGTTAAACACGGAATTAGCAGGAGTTCTTGGGATGATTTCTCTAACTGCTATCCAGATTTGGTCTACCATTTGGATCTTTTTGGGTTTTCACTTCCTTTATGTCATTAGAGGACTTGCCATATCCGGGATCATTTTTGGGTTGACTATACCTGCTGCTTTGATCATAGACTTGATTGCACTAGTAACATTACATGTGTCTACTCTTCATTGGTTGATATCTCTTTTGTATTCAACTCAGATACAGGCATTAGCAGCTTTGTGGCGCCTTTTCAGGGGTCGAAAGTGGAATCCTCTTCGTCAGAGATTAGATAGTTATGACTACACTGTCAAGCAGCACATAGTTGGATCTCTTCTGTTCACACCACTCTTGCTTCTATTGCCCACAACTTCTGTTTTCTATATCTTCTTTACCATTATGAACACAACCATCAGCTTAATCTGTATACTGATTGAAGTCACTATATCAGTTATTCATGCTACTCCATATATCAAAGTTTTCCTGTGGTTGGTCAGGCCAAGAAGATTCCCTTCTGGGATATGGTTTGAAATCAAATCTGTTTGGAGTCAGGGCCTTGATTCTTGTGTGGATATGGATTCACAGGTAGCTAATATGCAGAGTAAAAAAGACAGAACCAAAGAAAAGCCTTCTGTTGTGGTTTCGTTTCTTCATAGCAACTTCTTGACTGTAGGACAAATAATTTTGCCTCACTACACTAAGGTTCTTTCTGGGAAACCTCGAACCTTGGTCGCTACAGCAGCATATGGAGTTCTCACTGGCAGAAGGATTCCATCAACAATTGGAACTGATCTCCCAACATTTCCATGGATGATAATTCCCTGCAAAGAGTTTTGGCGCCTCTGCTACGATTCAATTCTCGAATGCTACAGAAGTGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000506 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006464 GO:0006497 GO:0006505 GO:0006506 GO:0006629 GO:0006643 GO:0006644 GO:0006650 GO:0006661 GO:0006664 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009059 GO:0009247 GO:0009987 GO:0012505 GO:0016020 GO:0019538 GO:0019637 GO:0031984 GO:0032991 GO:0034645 GO:0036211 GO:0042157 GO:0042158 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046467 GO:0046474 GO:0046486 GO:0046488 GO:0071704 GO:0090407 GO:0098796 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1903509 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00563 ko01100 map00563 map01100

Pfam Domains

Protein Families

Gpi1

Protein Analysis

688

Amino Acids

78.28

Weight (kDa)

9.33

Isoelectric Point (pI)

43.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gpi1	PF05024	295 - 566	1.9e-78	N-acetylglucosaminyl transferase component (Gpi1)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005134)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57170 AT3G57170
fragaria_vesca	FvH4_6g24900 FvH4_6g24900 FvH4_6g24900 FvH4_6g24900 FvH4_6g24900 FvH4_6g24900 FvH4_6g24900 FvH4_6g24900
malus_domestica	MD07G1151600.v1.1 MD12G1089200.v1.1 MD14G1081800.v1.1
prunus_persica	Prupe.4G274500_v2.0.a1 Prupe.5G000500_v2.0.a1
pyrus_communis	pycom07g15000 pycom12g07440 pycom14g07110
rosa_chinensis	RchiOBHm_Chr2g0124601
rosa_laevigata	RLG00000018807
rosa_multiflora	Rmu_sc0042054.1_g000001
rosa_roxburghii	Rroxscaffold_2G00119850
rosa_rugosa	Rorug02G0251500 Rorug02G0251500
rosa_samantha	Rh2AG310200 Rh2BG318700 Rh2CG297100 Rh2CG302000 Rh2DG333900
rosa_wichuraiana	Rw2G025090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1493
AatII	GACGTC	1 cut(s)	120
Acc36I	ACCTGC	2 cut(s)	1151, 1327
AccB1I	GGYRCC	3 cut(s)	686, 1431, 2022
AccI	GTMKAC	4 cut(s)	809, 1232, 1367, 1612
AccII	CGCG	1 cut(s)	149
AciI	CCGC	3 cut(s)	657, 706, 981
AclWI	GGATC	7 cut(s)	152, 364, 377, 396, 1250, 1304, 1522
AcoI	YGGCCR	2 cut(s)	26, 917
AcsI	RAATTY	3 cut(s)	180, 538, 1094
AcuI	CTGAAG	2 cut(s)	203, 782
AcyI	GRCGYC	3 cut(s)	117, 1432, 2023
AfiI	CCNNNNNNNGG	5 cut(s)	506, 556, 1293, 1441, 1675
AflII	CTTAAG	1 cut(s)	989
AflIII	ACRYGT	3 cut(s)	375, 723, 1360
AgsI	TTSAA	7 cut(s)	673, 932, 1168, 1401, 1622, 1715, 2040
AhlI	ACTAGT	1 cut(s)	1348
AjnI	CCWGG	1 cut(s)	174
AjuI	GAANNNNNNNTTGG	2 cut(s)	349, 381
Alw21I	GWGCWC	1 cut(s)	514
Alw26I	GTCTC	3 cut(s)	468, 488, 954
AlwI	GGATC	7 cut(s)	152, 364, 377, 396, 1250, 1304, 1522
AlwNI	CAGNNNCTG	2 cut(s)	805, 1073
AoxI	GGCC	4 cut(s)	26, 917, 1682, 1738
ApeKI	GCWGC	7 cut(s)	34, 433, 604, 1322, 1421, 1501, 1925
ApoI	RAATTY	3 cut(s)	180, 538, 1094
AseI	ATTAAT	1 cut(s)	642
AspLEI	GCGC	3 cut(s)	1128, 1434, 2025
AspS9I	GGNCC	2 cut(s)	547, 1738
AsuC2I	CCSGG	1 cut(s)	1294
AsuHPI	GGTGA	1 cut(s)	506
AvaII	GGWCC	1 cut(s)	547
BaeI	ACNNNNGTAYC	2 cut(s)	1043, 1076
BalI	TGGCCA	1 cut(s)	919
BamHI	GGATCC	1 cut(s)	369
BanI	GGYRCC	3 cut(s)	686, 1431, 2022
BanII	GRGCYC	1 cut(s)	514
Bbv12I	GWGCWC	1 cut(s)	514
BbvI	GCAGC	7 cut(s)	46, 445, 616, 1309, 1433, 1513, 1937
BccI	CCATC	3 cut(s)	1141, 1604, 1966
BceAI	ACGGC	1 cut(s)	545
BcgI	CGANNNNNNTGC	2 cut(s)	127, 161
BciT130I	CCWGG	1 cut(s)	176
BciVI	GTATCC	1 cut(s)	616
BclI	TGATCA	2 cut(s)	280, 1329
BcnI	CCSGG	1 cut(s)	1294
BcoDI	GTCTC	3 cut(s)	468, 488, 954
BcuI	ACTAGT	1 cut(s)	1348
BfaI	CTAG	2 cut(s)	426, 1349
BfmI	CTRYAG	4 cut(s)	1158, 1854, 1920, 2053
BfoI	RGCGCY	2 cut(s)	1435, 2026
BfrI	CTTAAG	1 cut(s)	989
BfuAI	ACCTGC	2 cut(s)	1151, 1327
BfuI	GTATCC	1 cut(s)	616
BisI	GCNGC	9 cut(s)	35, 434, 605, 657, 981, 1323, 1422, 1502, 1926
BlsI	GCNGC	9 cut(s)	36, 435, 606, 658, 982, 1324, 1423, 1503, 1927
Bme1390I	CCNGG	2 cut(s)	176, 1294
Bme18I	GGWCC	1 cut(s)	547
BmgT120I	GGNCC	2 cut(s)	547, 1738
BmiI	GGNNCC	5 cut(s)	371, 561, 688, 1433, 2024
BmrFI	CCNGG	2 cut(s)	176, 1294
BmsI	GCATC	4 cut(s)	195, 296, 668, 836
BpmI	CTGGAG	1 cut(s)	158
BpuMI	CCSGG	1 cut(s)	1294
BsaAI	YACGTR	1 cut(s)	383
BsaBI	GATNNNNATC	1 cut(s)	285
BsaHI	GRCGYC	3 cut(s)	117, 1432, 2023
BsaI	GGTCTC	1 cut(s)	954
BsaJI	CCNNGG	4 cut(s)	175, 555, 1911, 1991
BsaXI	ACNNNNNCTCC	2 cut(s)	446, 476
Bsc4I	CCNNNNNNNGG	5 cut(s)	506, 556, 1293, 1441, 1675
Bse1I	ACTGG	2 cut(s)	1101, 1948
Bse3DI	GCAATG	1 cut(s)	983
Bse8I	GATNNNNATC	1 cut(s)	285
BseBI	CCWGG	1 cut(s)	176
BseDI	CCNNGG	4 cut(s)	175, 555, 1911, 1991
BseGI	GGATG	3 cut(s)	311, 1206, 2001
BseJI	GATNNNNATC	1 cut(s)	285
BseLI	CCNNNNNNNGG	5 cut(s)	506, 556, 1293, 1441, 1675
BseMI	GCAATG	1 cut(s)	983
BseMII	CTCAG	3 cut(s)	331, 917, 1418
BseNI	ACTGG	2 cut(s)	1101, 1948
BseRI	GAGGAG	2 cut(s)	79, 82
BseXI	GCAGC	7 cut(s)	46, 445, 616, 1309, 1433, 1513, 1937
BseYI	CCCAGC	1 cut(s)	141
BsgI	GTGCAG	1 cut(s)	121
Bsh1236I	CGCG	1 cut(s)	149
BshFI	GGCC	4 cut(s)	28, 919, 1684, 1740
BshNI	GGYRCC	3 cut(s)	686, 1431, 2022
BsiHKAI	GWGCWC	1 cut(s)	514
BsiSI	CCGG	1 cut(s)	1293
BslFI	GGGAC	1 cut(s)	1139
BslI	CCNNNNNNNGG	5 cut(s)	506, 556, 1293, 1441, 1675
BsmAI	GTCTC	3 cut(s)	468, 488, 954
BsmFI	GGGAC	1 cut(s)	1139
BsmI	GAATGC	3 cut(s)	435, 994, 2054
BsnI	GGCC	4 cut(s)	28, 919, 1684, 1740
Bso31I	GGTCTC	1 cut(s)	954
Bsp1286I	GDGCHC	1 cut(s)	514
Bsp143I	GATC	9 cut(s)	157, 280, 369, 388, 1242, 1296, 1329, 1514, 1975
Bsp19I	CCATGG	1 cut(s)	1991
BspACI	CCGC	3 cut(s)	657, 706, 981
BspANI	GGCC	4 cut(s)	28, 919, 1684, 1740
BspCNI	CTCAG	3 cut(s)	330, 916, 1417
BspFNI	CGCG	1 cut(s)	149
BspHI	TCATGA	1 cut(s)	586
BspLI	GGNNCC	5 cut(s)	371, 561, 688, 1433, 2024
BspMAI	CTGCAG	1 cut(s)	1162
BspMI	ACCTGC	2 cut(s)	1151, 1327
BspPI	GGATC	7 cut(s)	152, 364, 377, 396, 1250, 1304, 1522
BspT107I	GGYRCC	3 cut(s)	686, 1431, 2022
BspTI	CTTAAG	1 cut(s)	989
BspTNI	GGTCTC	1 cut(s)	954
BsrDI	GCAATG	1 cut(s)	983
BsrI	ACTGG	2 cut(s)	1101, 1948
BssECI	CCNNGG	4 cut(s)	175, 555, 1911, 1991
BssMI	GATC	9 cut(s)	157, 280, 369, 388, 1242, 1296, 1329, 1514, 1975
BssNAI	GTATAC	2 cut(s)	810, 1613
BssNI	GRCGYC	3 cut(s)	117, 1432, 2023
BssT1I	CCWWGG	3 cut(s)	555, 1911, 1991
Bst1107I	GTATAC	2 cut(s)	810, 1613
Bst2UI	CCWGG	1 cut(s)	176
Bst4CI	ACNGT	4 cut(s)	628, 1056, 1495, 1855
Bst6I	CTCTTC	4 cut(s)	100, 1377, 1467, 1524
BstACI	GRCGYC	3 cut(s)	117, 1432, 2023
BstAFI	CTTAAG	1 cut(s)	989
BstBAI	YACGTR	1 cut(s)	383
BstC8I	GCNNGC	3 cut(s)	136, 147, 341
BstDEI	CTNAG	4 cut(s)	317, 903, 1404, 1884
BstDSI	CCRYGG	1 cut(s)	1991
BstF5I	GGATG	3 cut(s)	311, 1206, 2001
BstFNI	CGCG	1 cut(s)	149
BstH2I	RGCGCY	2 cut(s)	1435, 2026
BstHHI	GCGC	3 cut(s)	1128, 1434, 2025
BstKTI	GATC	9 cut(s)	160, 283, 372, 391, 1245, 1299, 1332, 1517, 1978
BstMAI	GTCTC	3 cut(s)	468, 488, 954
BstMBI	GATC	9 cut(s)	157, 280, 369, 388, 1242, 1296, 1329, 1514, 1975
BstMWI	GCNNNNNNNGC	7 cut(s)	34, 214, 656, 977, 1421, 1546, 1925
BstNI	CCWGG	1 cut(s)	176
BstNSI	RCATGY	3 cut(s)	379, 727, 1364
BstSCI	CCNGG	2 cut(s)	174, 1292
BstSFI	CTRYAG	4 cut(s)	1158, 1854, 1920, 2053
BstUI	CGCG	1 cut(s)	149
BstV1I	GCAGC	7 cut(s)	46, 445, 616, 1309, 1433, 1513, 1937
BstX2I	RGATCY	3 cut(s)	369, 1242, 1514
BstYI	RGATCY	3 cut(s)	369, 1242, 1514
BstZ17I	GTATAC	2 cut(s)	810, 1613
BsuI	GTATCC	1 cut(s)	616
BsuRI	GGCC	4 cut(s)	28, 919, 1684, 1740
BtgI	CCRYGG	1 cut(s)	1991
BtsCI	GGATG	3 cut(s)	311, 1206, 2001
BtsIMutI	CAGTG	5 cut(s)	325, 1052, 1108, 1491, 1941
BveI	ACCTGC	2 cut(s)	1151, 1327
Cac8I	GCNNGC	3 cut(s)	136, 147, 341
CaiI	CAGNNNCTG	2 cut(s)	805, 1073
CciI	TCATGA	1 cut(s)	586
CfoI	GCGC	3 cut(s)	1128, 1434, 2025
Cfr13I	GGNCC	2 cut(s)	547, 1738
CseI	GACGC	1 cut(s)	246
CspCI	CAANNNNNGTGG	2 cut(s)	301, 336
DdeI	CTNAG	4 cut(s)	317, 903, 1404, 1884
DinI	GGCGCC	2 cut(s)	1433, 2024
DpnI	GATC	9 cut(s)	159, 282, 371, 390, 1244, 1298, 1331, 1516, 1977
DpnII	GATC	9 cut(s)	157, 280, 369, 388, 1242, 1296, 1329, 1514, 1975
DrdI	GACNNNNNNGTC	1 cut(s)	1493
DseDI	GACNNNNNNGTC	1 cut(s)	1493
EaeI	YGGCCR	2 cut(s)	26, 917
Eam1104I	CTCTTC	4 cut(s)	100, 1377, 1467, 1524
EarI	CTCTTC	4 cut(s)	100, 1377, 1467, 1524
Ecl136II	GAGCTC	1 cut(s)	512
Eco130I	CCWWGG	3 cut(s)	555, 1911, 1991
Eco24I	GRGCYC	1 cut(s)	514
Eco31I	GGTCTC	1 cut(s)	954
Eco32I	GATATC	1 cut(s)	1386
Eco47I	GGWCC	1 cut(s)	547
Eco53kI	GAGCTC	1 cut(s)	512
Eco57I	CTGAAG	2 cut(s)	203, 782
EcoICRI	GAGCTC	1 cut(s)	512
EcoO109I	RGGNCCY	1 cut(s)	1738
EcoRI	GAATTC	2 cut(s)	180, 538
EcoRII	CCWGG	1 cut(s)	174
EcoRV	GATATC	1 cut(s)	1386
EcoT14I	CCWWGG	3 cut(s)	555, 1911, 1991
EcoT22I	ATGCAT	1 cut(s)	829
EcoT38I	GRGCYC	1 cut(s)	514
EgeI	GGCGCC	2 cut(s)	1433, 2024
EheI	GGCGCC	2 cut(s)	1433, 2024
ErhI	CCWWGG	3 cut(s)	555, 1911, 1991
FalI	AAGNNNNNCTT	2 cut(s)	1681, 1713
FaqI	GGGAC	1 cut(s)	1139
FauNDI	CATATG	2 cut(s)	740, 1930
FbaI	TGATCA	2 cut(s)	280, 1329
FblI	GTMKAC	4 cut(s)	809, 1232, 1367, 1612
Fnu4HI	GCNGC	9 cut(s)	35, 434, 605, 657, 981, 1323, 1422, 1502, 1926
FokI	GGATG	3 cut(s)	318, 1213, 2008
FriOI	GRGCYC	1 cut(s)	514
Fsp4HI	GCNGC	9 cut(s)	35, 434, 605, 657, 981, 1323, 1422, 1502, 1926
FspBI	CTAG	2 cut(s)	426, 1349
GlaI	GCGC	3 cut(s)	1127, 1433, 2024
GluI	GCNGC	9 cut(s)	35, 434, 605, 657, 981, 1323, 1422, 1502, 1926
GsaI	CCCAGC	1 cut(s)	145
GsuI	CTGGAG	1 cut(s)	158
HaeII	RGCGCY	2 cut(s)	1435, 2026
HaeIII	GGCC	4 cut(s)	28, 919, 1684, 1740
HapII	CCGG	1 cut(s)	1293
HgaI	GACGC	1 cut(s)	246
HhaI	GCGC	3 cut(s)	1128, 1434, 2025
Hin1I	GRCGYC	3 cut(s)	117, 1432, 2023
Hin6I	GCGC	3 cut(s)	1126, 1432, 2023
HinP1I	GCGC	3 cut(s)	1126, 1432, 2023
HincII	GTYRAC	1 cut(s)	1311
HindII	GTYRAC	1 cut(s)	1311
HpaII	CCGG	1 cut(s)	1293
HphI	GGTGA	1 cut(s)	506
Hpy166II	GTNNAC	8 cut(s)	478, 721, 810, 1233, 1311, 1368, 1527, 1613
Hpy188I	TCNGA	7 cut(s)	55, 157, 819, 832, 906, 1407, 1470
Hpy8I	GTNNAC	8 cut(s)	478, 721, 810, 1233, 1311, 1368, 1527, 1613
Hpy99I	CGWCG	2 cut(s)	119, 122
HpyAV	CCTTC	3 cut(s)	1707, 1824, 1944
HpyCH4III	ACNGT	4 cut(s)	628, 1056, 1495, 1855
HpyCH4IV	ACGT	4 cut(s)	117, 382, 789, 1107
HpyF10VI	GCNNNNNNNGC	7 cut(s)	34, 214, 656, 977, 1421, 1546, 1925
HpyF3I	CTNAG	4 cut(s)	317, 903, 1404, 1884
HpySE526I	ACGT	4 cut(s)	117, 382, 789, 1107
Hsp92I	GRCGYC	3 cut(s)	117, 1432, 2023
HspAI	GCGC	3 cut(s)	1126, 1432, 2023
KasI	GGCGCC	2 cut(s)	1431, 2022
Ksp22I	TGATCA	2 cut(s)	280, 1329
Kzo9I	GATC	9 cut(s)	157, 280, 369, 388, 1242, 1296, 1329, 1514, 1975
LmnI	GCTCC	2 cut(s)	509, 565
Lsp1109I	GCAGC	7 cut(s)	46, 445, 616, 1309, 1433, 1513, 1937
LweI	GCATC	4 cut(s)	195, 296, 668, 836
MaeI	CTAG	2 cut(s)	426, 1349
MaeII	ACGT	4 cut(s)	117, 382, 789, 1107
MaeIII	GTNAC	6 cut(s)	378, 1103, 1108, 1351, 1624, 2060
MalI	GATC	9 cut(s)	159, 282, 371, 390, 1244, 1298, 1331, 1516, 1977
MboI	GATC	9 cut(s)	157, 280, 369, 388, 1242, 1296, 1329, 1514, 1975
MfeI	CAATTG	2 cut(s)	937, 1965
MflI	RGATCY	3 cut(s)	369, 1242, 1514
MhlI	GDGCHC	1 cut(s)	514
MlsI	TGGCCA	1 cut(s)	919
MluNI	TGGCCA	1 cut(s)	919
Mly113I	GGCGCC	2 cut(s)	1432, 2023
MlyI	GAGTC	5 cut(s)	50, 490, 827, 1161, 1741
MmeI	TCCRAC	2 cut(s)	244, 1492
Mox20I	TGGCCA	1 cut(s)	919
Mph1103I	ATGCAT	1 cut(s)	829
MscI	TGGCCA	1 cut(s)	919
MseI	TTAA	4 cut(s)	642, 990, 1172, 1604
MslI	CAYNNNNRTG	2 cut(s)	447, 1990
Msp20I	TGGCCA	1 cut(s)	919
MspA1I	CMGCKG	2 cut(s)	659, 870
MspCI	CTTAAG	1 cut(s)	989
MspI	CCGG	1 cut(s)	1293
MspR9I	CCNGG	2 cut(s)	176, 1294
MunI	CAATTG	2 cut(s)	937, 1965
Mva1269I	GAATGC	3 cut(s)	435, 994, 2054
MvaI	CCWGG	1 cut(s)	176
MvnI	CGCG	1 cut(s)	149
MwoI	GCNNNNNNNGC	7 cut(s)	34, 214, 656, 977, 1421, 1546, 1925
NarI	GGCGCC	2 cut(s)	1432, 2023
NciI	CCSGG	1 cut(s)	1294
NcoI	CCATGG	1 cut(s)	1991
NdeI	CATATG	2 cut(s)	740, 1930
NdeII	GATC	9 cut(s)	157, 280, 369, 388, 1242, 1296, 1329, 1514, 1975
NlaIV	GGNNCC	5 cut(s)	371, 561, 688, 1433, 2024
NmuCI	GTSAC	3 cut(s)	1103, 1624, 2060
NsiI	ATGCAT	1 cut(s)	829
NspI	RCATGY	3 cut(s)	379, 727, 1364
PagI	TCATGA	1 cut(s)	586
PciI	ACATGT	3 cut(s)	375, 723, 1360
PcsI	WCGNNNNNNNCGW	1 cut(s)	153
PctI	GAATGC	3 cut(s)	435, 994, 2054
PfeI	GAWTC	9 cut(s)	421, 891, 1070, 1456, 1692, 1745, 1763, 1954, 2036
PflFI	GACNNNGTC	1 cut(s)	119
PfoI	TCCNGGA	1 cut(s)	1292
PkrI	GCNGC	9 cut(s)	36, 435, 606, 658, 982, 1324, 1423, 1503, 1927
PleI	GAGTC	5 cut(s)	50, 490, 827, 1160, 1740
PluTI	GGCGCC	2 cut(s)	1435, 2026
PpsI	GAGTC	5 cut(s)	50, 490, 827, 1160, 1740
Ppu21I	YACGTR	1 cut(s)	383
PscI	ACATGT	3 cut(s)	375, 723, 1360
PshBI	ATTAAT	1 cut(s)	642
Psp124BI	GAGCTC	1 cut(s)	514
Psp6I	CCWGG	1 cut(s)	174
PspFI	CCCAGC	1 cut(s)	141
PspGI	CCWGG	1 cut(s)	174
PspN4I	GGNNCC	5 cut(s)	371, 561, 688, 1433, 2024
PspPI	GGNCC	2 cut(s)	547, 1738
PstI	CTGCAG	1 cut(s)	1162
PstNI	CAGNNNCTG	2 cut(s)	805, 1073
PsuI	RGATCY	3 cut(s)	369, 1242, 1514
PsyI	GACNNNGTC	1 cut(s)	119
PvuII	CAGCTG	1 cut(s)	870
RseI	CAYNNNNRTG	2 cut(s)	447, 1990
SacI	GAGCTC	1 cut(s)	514
SaqAI	TTAA	4 cut(s)	642, 990, 1172, 1604
SatI	GCNGC	9 cut(s)	35, 434, 605, 657, 981, 1323, 1422, 1502, 1926
Sau3AI	GATC	9 cut(s)	157, 280, 369, 388, 1242, 1296, 1329, 1514, 1975
Sau96I	GGNCC	2 cut(s)	547, 1738
SbfI	CCTGCAGG	1 cut(s)	1162
SchI	GAGTC	5 cut(s)	50, 490, 827, 1161, 1741
ScrFI	CCNGG	2 cut(s)	176, 1294
SdaI	CCTGCAGG	1 cut(s)	1162
SduI	GDGCHC	1 cut(s)	514
SfaNI	GCATC	4 cut(s)	195, 296, 668, 836
SfcI	CTRYAG	4 cut(s)	1158, 1854, 1920, 2053
SfoI	GGCGCC	2 cut(s)	1433, 2024
SinI	GGWCC	1 cut(s)	547
SmiMI	CAYNNNNRTG	2 cut(s)	447, 1990
SmlI	CTYRAG	1 cut(s)	989
SmoI	CTYRAG	1 cut(s)	989
SpeI	ACTAGT	1 cut(s)	1348
Sse8387I	CCTGCAGG	1 cut(s)	1162
SsiI	CCGC	3 cut(s)	657, 706, 981
SspDI	GGCGCC	2 cut(s)	1431, 2022
SspMI	CTAG	2 cut(s)	426, 1349
SstI	GAGCTC	1 cut(s)	514
StyD4I	CCNGG	2 cut(s)	174, 1292
StyI	CCWWGG	3 cut(s)	555, 1911, 1991
TaaI	ACNGT	4 cut(s)	628, 1056, 1495, 1855
TaiI	ACGT	4 cut(s)	120, 385, 792, 1110
TaqI	TCGA	6 cut(s)	114, 466, 1020, 1447, 1906, 2046
TauI	GCSGC	2 cut(s)	659, 983
TfiI	GAWTC	9 cut(s)	421, 891, 1070, 1456, 1692, 1745, 1763, 1954, 2036
Tru1I	TTAA	4 cut(s)	642, 990, 1172, 1604
Tru9I	TTAA	4 cut(s)	642, 990, 1172, 1604
TscAI	CASTG	5 cut(s)	325, 1059, 1108, 1498, 1948
TseFI	GTSAC	3 cut(s)	1103, 1624, 2060
TseI	GCWGC	7 cut(s)	34, 433, 604, 1322, 1421, 1501, 1925
Tsp45I	GTSAC	3 cut(s)	1103, 1624, 2060
TspDTI	ATGAA	9 cut(s)	431, 575, 603, 727, 759, 1364, 1601, 1631, 1826
TspGWI	ACGGA	2 cut(s)	884, 1193
TspRI	CASTG	5 cut(s)	325, 1059, 1108, 1498, 1948
Tth111I	GACNNNGTC	1 cut(s)	119
Vha464I	CTTAAG	1 cut(s)	989
VpaK11BI	GGWCC	1 cut(s)	547
VspI	ATTAAT	1 cut(s)	642
XapI	RAATTY	3 cut(s)	180, 538, 1094
XceI	RCATGY	3 cut(s)	379, 727, 1364
XcmI	CCANNNNNNNNNTGG	2 cut(s)	317, 1989
XmiI	GTMKAC	4 cut(s)	809, 1232, 1367, 1612
XspI	CTAG	2 cut(s)	426, 1349
ZraI	GACGTC	1 cut(s)	118
Zsp2I	ATGCAT	1 cut(s)	829

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.