transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g34670 |
| malus_domestica | MD00G1092300.v1.1 MD09G1183800.v1.1 |
| prunus_persica | Prupe.3G042100_v2.0.a1 |
| pyrus_communis | pycom09g10130 |
| rosa_chinensis | RchiOBHm_Chr2g0145221 |
| rosa_laevigata | RLG00000020133 |
| rosa_multiflora | Rmu_sc0001298.1_g000013 |
| rosa_roxburghii | Rroxscaffold_2G00100780 |
| rosa_rugosa | Rorug02G0391500 |
| rosa_samantha | Rh2AG444200 Rh2BG455100 Rh2CG431100 Rh2DG465100 |
| rosa_wichuraiana | Rw2G036300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 24 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 186, 277 |
| AluBI | AGCT | 5 cut(s) | 62, 101, 110, 127, 131 |
| AluI | AGCT | 5 cut(s) | 62, 101, 110, 127, 131 |
| ApeKI | GCWGC | 2 cut(s) | 176, 295 |
| AsuNHI | GCTAGC | 1 cut(s) | 127 |
| BbvCI | CCTCAGC | 2 cut(s) | 111, 132 |
| BbvI | GCAGC | 2 cut(s) | 188, 282 |
| BccI | CCATC | 1 cut(s) | 216 |
| BfaI | CTAG | 1 cut(s) | 128 |
| BisI | GCNGC | 2 cut(s) | 177, 296 |
| BlsI | GCNGC | 2 cut(s) | 178, 297 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BmtI | GCTAGC | 1 cut(s) | 131 |
| Bpu10I | CCTNAGC | 2 cut(s) | 111, 132 |
| BsaJI | CCNNGG | 1 cut(s) | 307 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 186, 277 |
| BseDI | CCNNGG | 1 cut(s) | 307 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 186, 277 |
| BseMII | CTCAG | 3 cut(s) | 102, 123, 304 |
| BseXI | GCAGC | 2 cut(s) | 188, 282 |
| BsgI | GTGCAG | 1 cut(s) | 281 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 186, 277 |
| Bsp143I | GATC | 1 cut(s) | 118 |
| BspACI | CCGC | 1 cut(s) | 24 |
| BspCNI | CTCAG | 3 cut(s) | 103, 124, 303 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BspOI | GCTAGC | 1 cut(s) | 131 |
| BssECI | CCNNGG | 1 cut(s) | 307 |
| BssMI | GATC | 1 cut(s) | 118 |
| BssT1I | CCWWGG | 1 cut(s) | 307 |
| Bst6I | CTCTTC | 2 cut(s) | 12, 270 |
| BstC8I | GCNNGC | 2 cut(s) | 129, 215 |
| BstDEI | CTNAG | 5 cut(s) | 111, 132, 218, 236, 290 |
| BstKTI | GATC | 1 cut(s) | 121 |
| BstMBI | GATC | 1 cut(s) | 118 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 107, 182, 223 |
| BstV1I | GCAGC | 2 cut(s) | 188, 282 |
| Cac8I | GCNNGC | 2 cut(s) | 129, 215 |
| CviAII | CATG | 1 cut(s) | 149 |
| DdeI | CTNAG | 5 cut(s) | 111, 132, 218, 236, 290 |
| DpnI | GATC | 1 cut(s) | 120 |
| DpnII | GATC | 1 cut(s) | 118 |
| Eam1104I | CTCTTC | 2 cut(s) | 12, 270 |
| EarI | CTCTTC | 2 cut(s) | 12, 270 |
| Eco130I | CCWWGG | 1 cut(s) | 307 |
| EcoT14I | CCWWGG | 1 cut(s) | 307 |
| ErhI | CCWWGG | 1 cut(s) | 307 |
| FaeI | CATG | 1 cut(s) | 152 |
| FaiI | YATR | 2 cut(s) | 150, 263 |
| FatI | CATG | 1 cut(s) | 148 |
| Fnu4HI | GCNGC | 2 cut(s) | 177, 296 |
| Fsp4HI | GCNGC | 2 cut(s) | 177, 296 |
| FspBI | CTAG | 1 cut(s) | 128 |
| GluI | GCNGC | 2 cut(s) | 177, 296 |
| Hin1II | CATG | 1 cut(s) | 152 |
| HincII | GTYRAC | 1 cut(s) | 91 |
| HindII | GTYRAC | 1 cut(s) | 91 |
| HinfI | GANTC | 3 cut(s) | 20, 193, 286 |
| Hpy166II | GTNNAC | 1 cut(s) | 91 |
| Hpy188I | TCNGA | 2 cut(s) | 123, 268 |
| Hpy188III | TCNNGA | 1 cut(s) | 250 |
| Hpy8I | GTNNAC | 1 cut(s) | 91 |
| HpyCH4V | TGCA | 4 cut(s) | 143, 176, 213, 298 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 107, 182, 223 |
| HpyF3I | CTNAG | 5 cut(s) | 111, 132, 218, 236, 290 |
| Hsp92II | CATG | 1 cut(s) | 152 |
| Kzo9I | GATC | 1 cut(s) | 118 |
| LmnI | GCTCC | 2 cut(s) | 10, 98 |
| LpnPI | CCDG | 3 cut(s) | 171, 199, 277 |
| Lsp1109I | GCAGC | 2 cut(s) | 188, 282 |
| MaeI | CTAG | 1 cut(s) | 128 |
| MaeIII | GTNAC | 1 cut(s) | 136 |
| MalI | GATC | 1 cut(s) | 120 |
| MboI | GATC | 1 cut(s) | 118 |
| MboII | GAAGA | 4 cut(s) | 29, 55, 128, 287 |
| MfeI | CAATTG | 1 cut(s) | 171 |
| MluCI | AATT | 2 cut(s) | 144, 171 |
| MlyI | GAGTC | 1 cut(s) | 29 |
| MmeI | TCCRAC | 1 cut(s) | 36 |
| MnlI | CCTC | 5 cut(s) | 79, 106, 127, 248, 271 |
| MseI | TTAA | 1 cut(s) | 48 |
| MspA1I | CMGCKG | 1 cut(s) | 110 |
| MunI | CAATTG | 1 cut(s) | 171 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 107, 182, 223 |
| NdeII | GATC | 1 cut(s) | 118 |
| NheI | GCTAGC | 1 cut(s) | 127 |
| NlaIII | CATG | 1 cut(s) | 152 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| PfeI | GAWTC | 2 cut(s) | 193, 286 |
| PkrI | GCNGC | 2 cut(s) | 178, 297 |
| PleI | GAGTC | 1 cut(s) | 28 |
| PpsI | GAGTC | 1 cut(s) | 28 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| PvuII | CAGCTG | 1 cut(s) | 110 |
| SaqAI | TTAA | 1 cut(s) | 48 |
| SatI | GCNGC | 2 cut(s) | 177, 296 |
| Sau3AI | GATC | 1 cut(s) | 118 |
| SchI | GAGTC | 1 cut(s) | 29 |
| SetI | ASST | 8 cut(s) | 64, 90, 103, 112, 129, 133, 138, 320 |
| Sse9I | AATT | 2 cut(s) | 144, 171 |
| SsiI | CCGC | 1 cut(s) | 24 |
| SspMI | CTAG | 1 cut(s) | 128 |
| StyI | CCWWGG | 1 cut(s) | 307 |
| TasI | AATT | 2 cut(s) | 144, 171 |
| TfiI | GAWTC | 2 cut(s) | 193, 286 |
| Tru1I | TTAA | 1 cut(s) | 48 |
| Tru9I | TTAA | 1 cut(s) | 48 |
| TseI | GCWGC | 2 cut(s) | 176, 295 |
| TspDTI | ATGAA | 3 cut(s) | 56, 83, 137 |
| XspI | CTAG | 1 cut(s) | 128 |