ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G16070 |
| fragaria_vesca | FvH4_6g31461 |
| malus_domestica | MD09G1210900.v1.1 MD17G1193700.v1.1 |
| prunus_persica | Prupe.3G069200_v2.0.a1 |
| pyrus_communis | pycom09g12850 |
| rosa_chinensis | RchiOBHm_Chr2g0138311 |
| rosa_laevigata | RLG00000019733 |
| rosa_multiflora | Rmu_sc0002475.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00106340 |
| rosa_rugosa | Rorug02G0351100 Rorug02G0351200 |
| rosa_samantha | Rh2AG398800 Rh2BG408800 Rh2BG410200 Rh2CG385600 Rh2DG419100 |
| rosa_wichuraiana | Rw2G032500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 98 |
| AciI | CCGC | 1 cut(s) | 249 |
| AclWI | GGATC | 2 cut(s) | 152, 165 |
| AcsI | RAATTY | 1 cut(s) | 241 |
| AfaI | GTAC | 1 cut(s) | 348 |
| AgsI | TTSAA | 2 cut(s) | 7, 59 |
| AluBI | AGCT | 3 cut(s) | 12, 49, 174 |
| AluI | AGCT | 3 cut(s) | 12, 49, 174 |
| Alw21I | GWGCWC | 1 cut(s) | 133 |
| Alw26I | GTCTC | 1 cut(s) | 261 |
| Alw44I | GTGCAC | 1 cut(s) | 129 |
| AlwI | GGATC | 2 cut(s) | 152, 165 |
| ApaLI | GTGCAC | 1 cut(s) | 129 |
| ApoI | RAATTY | 1 cut(s) | 241 |
| AsuHPI | GGTGA | 2 cut(s) | 124, 320 |
| BaeGI | GKGCMC | 1 cut(s) | 133 |
| BamHI | GGATCC | 1 cut(s) | 157 |
| BauI | CACGAG | 1 cut(s) | 258 |
| Bbv12I | GWGCWC | 1 cut(s) | 133 |
| BcoDI | GTCTC | 1 cut(s) | 261 |
| BfaI | CTAG | 1 cut(s) | 246 |
| BmiI | GGNNCC | 1 cut(s) | 159 |
| BsaBI | GATNNNNATC | 1 cut(s) | 156 |
| BsaI | GGTCTC | 1 cut(s) | 261 |
| BsaWI | WCCGGW | 1 cut(s) | 341 |
| Bse3DI | GCAATG | 1 cut(s) | 328 |
| Bse8I | GATNNNNATC | 1 cut(s) | 156 |
| BseGI | GGATG | 1 cut(s) | 157 |
| BseJI | GATNNNNATC | 1 cut(s) | 156 |
| BseMI | GCAATG | 1 cut(s) | 328 |
| BseMII | CTCAG | 1 cut(s) | 192 |
| BseSI | GKGCMC | 1 cut(s) | 133 |
| BsiHKAI | GWGCWC | 1 cut(s) | 133 |
| BsiSI | CCGG | 1 cut(s) | 342 |
| BslFI | GGGAC | 1 cut(s) | 248 |
| BsmAI | GTCTC | 1 cut(s) | 261 |
| BsmFI | GGGAC | 1 cut(s) | 248 |
| Bso31I | GGTCTC | 1 cut(s) | 261 |
| Bsp1286I | GDGCHC | 1 cut(s) | 133 |
| Bsp143I | GATC | 3 cut(s) | 157, 262, 280 |
| BspACI | CCGC | 1 cut(s) | 249 |
| BspCNI | CTCAG | 1 cut(s) | 193 |
| BspLI | GGNNCC | 1 cut(s) | 159 |
| BspPI | GGATC | 2 cut(s) | 152, 165 |
| BspTNI | GGTCTC | 1 cut(s) | 261 |
| BsrDI | GCAATG | 1 cut(s) | 328 |
| BssMI | GATC | 3 cut(s) | 157, 262, 280 |
| BssSI | CACGAG | 1 cut(s) | 258 |
| Bst2BI | CACGAG | 1 cut(s) | 258 |
| Bst6I | CTCTTC | 2 cut(s) | 12, 113 |
| BstDEI | CTNAG | 1 cut(s) | 201 |
| BstF5I | GGATG | 1 cut(s) | 157 |
| BstKTI | GATC | 3 cut(s) | 160, 265, 283 |
| BstMAI | GTCTC | 1 cut(s) | 261 |
| BstMBI | GATC | 3 cut(s) | 157, 262, 280 |
| BstSLI | GKGCMC | 1 cut(s) | 133 |
| BstX2I | RGATCY | 1 cut(s) | 157 |
| BstYI | RGATCY | 1 cut(s) | 157 |
| BtsCI | GGATG | 1 cut(s) | 157 |
| BtsIMutI | CAGTG | 1 cut(s) | 72 |
| Csp6I | GTAC | 1 cut(s) | 347 |
| CviAII | CATG | 1 cut(s) | 181 |
| CviJI | RGCY | 3 cut(s) | 12, 49, 174 |
| CviKI_1 | RGCY | 3 cut(s) | 12, 49, 174 |
| CviQI | GTAC | 1 cut(s) | 347 |
| DdeI | CTNAG | 1 cut(s) | 201 |
| DpnI | GATC | 3 cut(s) | 159, 264, 282 |
| DpnII | GATC | 3 cut(s) | 157, 262, 280 |
| Eam1104I | CTCTTC | 2 cut(s) | 12, 113 |
| EarI | CTCTTC | 2 cut(s) | 12, 113 |
| Eco31I | GGTCTC | 1 cut(s) | 261 |
| EcoRI | GAATTC | 1 cut(s) | 241 |
| FaeI | CATG | 1 cut(s) | 184 |
| FaiI | YATR | 3 cut(s) | 84, 104, 182 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 38, 70 |
| FaqI | GGGAC | 1 cut(s) | 248 |
| FatI | CATG | 1 cut(s) | 180 |
| FblI | GTMKAC | 1 cut(s) | 98 |
| FokI | GGATG | 1 cut(s) | 164 |
| FspBI | CTAG | 1 cut(s) | 246 |
| HapII | CCGG | 1 cut(s) | 342 |
| Hin1II | CATG | 1 cut(s) | 184 |
| HindIII | AAGCTT | 1 cut(s) | 172 |
| HinfI | GANTC | 1 cut(s) | 95 |
| HpaII | CCGG | 1 cut(s) | 342 |
| HphI | GGTGA | 2 cut(s) | 124, 320 |
| Hpy166II | GTNNAC | 4 cut(s) | 99, 131, 328, 347 |
| Hpy188III | TCNNGA | 3 cut(s) | 200, 260, 295 |
| Hpy8I | GTNNAC | 4 cut(s) | 99, 131, 328, 347 |
| HpyAV | CCTTC | 2 cut(s) | 212, 246 |
| HpyCH4V | TGCA | 1 cut(s) | 131 |
| HpyF3I | CTNAG | 1 cut(s) | 201 |
| Hsp92II | CATG | 1 cut(s) | 184 |
| Kzo9I | GATC | 3 cut(s) | 157, 262, 280 |
| LmnI | GCTCC | 1 cut(s) | 318 |
| LpnPI | CCDG | 2 cut(s) | 213, 308 |
| MaeI | CTAG | 1 cut(s) | 246 |
| MalI | GATC | 3 cut(s) | 159, 264, 282 |
| MboI | GATC | 3 cut(s) | 157, 262, 280 |
| MboII | GAAGA | 6 cut(s) | 29, 46, 127, 130, 217, 220 |
| MflI | RGATCY | 1 cut(s) | 157 |
| MhlI | GDGCHC | 1 cut(s) | 133 |
| MluCI | AATT | 1 cut(s) | 241 |
| MlyI | GAGTC | 1 cut(s) | 104 |
| MnlI | CCTC | 3 cut(s) | 148, 308, 342 |
| MspI | CCGG | 1 cut(s) | 342 |
| NdeII | GATC | 3 cut(s) | 157, 262, 280 |
| NlaIII | CATG | 1 cut(s) | 184 |
| NlaIV | GGNNCC | 1 cut(s) | 159 |
| PleI | GAGTC | 1 cut(s) | 103 |
| PpsI | GAGTC | 1 cut(s) | 103 |
| PspN4I | GGNNCC | 1 cut(s) | 159 |
| PsuI | RGATCY | 1 cut(s) | 157 |
| RsaI | GTAC | 1 cut(s) | 348 |
| RsaNI | GTAC | 1 cut(s) | 347 |
| Sau3AI | GATC | 3 cut(s) | 157, 262, 280 |
| SchI | GAGTC | 1 cut(s) | 104 |
| SduI | GDGCHC | 1 cut(s) | 133 |
| SetI | ASST | 7 cut(s) | 14, 51, 56, 114, 176, 257, 352 |
| Sse9I | AATT | 1 cut(s) | 241 |
| SsiI | CCGC | 1 cut(s) | 249 |
| SspMI | CTAG | 1 cut(s) | 246 |
| TasI | AATT | 1 cut(s) | 241 |
| TscAI | CASTG | 1 cut(s) | 79 |
| TspDTI | ATGAA | 1 cut(s) | 166 |
| TspRI | CASTG | 1 cut(s) | 79 |
| VneI | GTGCAC | 1 cut(s) | 129 |
| XapI | RAATTY | 1 cut(s) | 241 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 302 |
| XmiI | GTMKAC | 1 cut(s) | 98 |
| XspI | CTAG | 1 cut(s) | 246 |