Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G07020 |
| fragaria_vesca | FvH4_7g03940 |
| malus_domestica | MD00G1152600.v1.1 MD07G1043600.v1.1 |
| prunus_persica | Prupe.2G044200_v2.0.a1 |
| pyrus_communis | pycom02g23650 pycom07g03100 |
| rosa_chinensis | RchiOBHm_Chr1g0327631 |
| rosa_laevigata | RLG00000029978 |
| rosa_multiflora | Rmu_co8173982.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00322500 |
| rosa_rugosa | Rorug01G0069000 |
| rosa_samantha | Rh1AG086100 Rh1BG068700 Rh1CG083600 Rh1DG090200 Rh2CG317000 |
| rosa_wichuraiana | Rw1G006710 Rw1G006720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 147 |
| AflIII | ACRYGT | 1 cut(s) | 36 |
| Alw21I | GWGCWC | 1 cut(s) | 160 |
| ApeKI | GCWGC | 2 cut(s) | 11, 29 |
| AseI | ATTAAT | 1 cut(s) | 99 |
| AsuHPI | GGTGA | 2 cut(s) | 100, 215 |
| BbsI | GAAGAC | 2 cut(s) | 135, 215 |
| Bbv12I | GWGCWC | 1 cut(s) | 160 |
| BbvI | GCAGC | 2 cut(s) | 23, 41 |
| BccI | CCATC | 2 cut(s) | 19, 119 |
| BceAI | ACGGC | 1 cut(s) | 294 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 137, 171 |
| BglII | AGATCT | 1 cut(s) | 116 |
| BisI | GCNGC | 2 cut(s) | 12, 30 |
| BlsI | GCNGC | 2 cut(s) | 13, 31 |
| BpiI | GAAGAC | 2 cut(s) | 135, 215 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 217, 247 |
| Bse1I | ACTGG | 1 cut(s) | 262 |
| BseNI | ACTGG | 1 cut(s) | 262 |
| BseXI | GCAGC | 2 cut(s) | 23, 41 |
| BseYI | CCCAGC | 1 cut(s) | 281 |
| BsgI | GTGCAG | 1 cut(s) | 30 |
| BsiHKAI | GWGCWC | 1 cut(s) | 160 |
| BslFI | GGGAC | 1 cut(s) | 238 |
| BsmFI | GGGAC | 1 cut(s) | 238 |
| Bsp1286I | GDGCHC | 1 cut(s) | 160 |
| Bsp143I | GATC | 1 cut(s) | 116 |
| BsrI | ACTGG | 1 cut(s) | 262 |
| BssMI | GATC | 1 cut(s) | 116 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 17 |
| BstKTI | GATC | 1 cut(s) | 119 |
| BstMBI | GATC | 1 cut(s) | 116 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 11, 17, 26 |
| BstV1I | GCAGC | 2 cut(s) | 23, 41 |
| BstV2I | GAAGAC | 2 cut(s) | 135, 215 |
| BstX2I | RGATCY | 1 cut(s) | 116 |
| BstYI | RGATCY | 1 cut(s) | 116 |
| BtsIMutI | CAGTG | 1 cut(s) | 123 |
| CseI | GACGC | 1 cut(s) | 140 |
| CviAII | CATG | 2 cut(s) | 17, 311 |
| CviJI | RGCY | 3 cut(s) | 14, 200, 281 |
| CviKI_1 | RGCY | 3 cut(s) | 14, 200, 281 |
| DpnI | GATC | 1 cut(s) | 118 |
| DpnII | GATC | 1 cut(s) | 116 |
| Eco57I | CTGAAG | 1 cut(s) | 147 |
| FaeI | CATG | 2 cut(s) | 20, 314 |
| FaiI | YATR | 7 cut(s) | 18, 264, 296, 298, 312, 326, 328 |
| FaqI | GGGAC | 1 cut(s) | 238 |
| FatI | CATG | 2 cut(s) | 16, 310 |
| Fnu4HI | GCNGC | 2 cut(s) | 12, 30 |
| Fsp4HI | GCNGC | 2 cut(s) | 12, 30 |
| GluI | GCNGC | 2 cut(s) | 12, 30 |
| GsaI | CCCAGC | 1 cut(s) | 285 |
| HgaI | GACGC | 1 cut(s) | 140 |
| Hin1II | CATG | 2 cut(s) | 20, 314 |
| HphI | GGTGA | 2 cut(s) | 100, 215 |
| Hpy166II | GTNNAC | 1 cut(s) | 42 |
| Hpy188I | TCNGA | 2 cut(s) | 116, 176 |
| Hpy188III | TCNNGA | 1 cut(s) | 161 |
| Hpy8I | GTNNAC | 1 cut(s) | 42 |
| HpyAV | CCTTC | 2 cut(s) | 79, 265 |
| HpyCH4IV | ACGT | 1 cut(s) | 38 |
| HpyCH4V | TGCA | 1 cut(s) | 11 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 11, 17, 26 |
| HpySE526I | ACGT | 1 cut(s) | 38 |
| Hsp92II | CATG | 2 cut(s) | 20, 314 |
| Kzo9I | GATC | 1 cut(s) | 116 |
| LmnI | GCTCC | 2 cut(s) | 163, 307 |
| LpnPI | CCDG | 5 cut(s) | 174, 186, 207, 243, 267 |
| Lsp1109I | GCAGC | 2 cut(s) | 23, 41 |
| MaeII | ACGT | 1 cut(s) | 38 |
| MalI | GATC | 1 cut(s) | 118 |
| MboI | GATC | 1 cut(s) | 116 |
| MboII | GAAGA | 7 cut(s) | 64, 67, 111, 140, 161, 220, 327 |
| MflI | RGATCY | 1 cut(s) | 116 |
| MhlI | GDGCHC | 1 cut(s) | 160 |
| MmeI | TCCRAC | 2 cut(s) | 154, 233 |
| MnlI | CCTC | 2 cut(s) | 163, 243 |
| MseI | TTAA | 1 cut(s) | 99 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 11, 17, 26 |
| NdeII | GATC | 1 cut(s) | 116 |
| NlaIII | CATG | 2 cut(s) | 20, 314 |
| PkrI | GCNGC | 2 cut(s) | 13, 31 |
| PshBI | ATTAAT | 1 cut(s) | 99 |
| PspFI | CCCAGC | 1 cut(s) | 281 |
| PsuI | RGATCY | 1 cut(s) | 116 |
| SaqAI | TTAA | 1 cut(s) | 99 |
| SatI | GCNGC | 2 cut(s) | 12, 30 |
| Sau3AI | GATC | 1 cut(s) | 116 |
| SduI | GDGCHC | 1 cut(s) | 160 |
| SetI | ASST | 4 cut(s) | 41, 71, 174, 183 |
| TaiI | ACGT | 1 cut(s) | 41 |
| TaqI | TCGA | 1 cut(s) | 147 |
| Tru1I | TTAA | 1 cut(s) | 99 |
| Tru9I | TTAA | 1 cut(s) | 99 |
| TscAI | CASTG | 1 cut(s) | 130 |
| TseI | GCWGC | 2 cut(s) | 11, 29 |
| TspRI | CASTG | 1 cut(s) | 130 |
| VspI | ATTAAT | 1 cut(s) | 99 |