E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom04g03300 pycom04g03380 |
| rosa_chinensis | RchiOBHm_Chr2g0127701 RchiOBHm_Chr2g0166791 RchiOBHm_Chr6g0267371 |
| rosa_samantha | Rh2AG323700 Rh2AG398600 Rh2AG592500 Rh2BG332900 Rh2BG604000 Rh2CG385400 Rh2CG574900 |
| rosa_wichuraiana | Rw2G026270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 106 |
| AcoI | YGGCCR | 1 cut(s) | 165 |
| AfaI | GTAC | 1 cut(s) | 188 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 28 |
| Alw26I | GTCTC | 1 cut(s) | 107 |
| AoxI | GGCC | 1 cut(s) | 165 |
| BalI | TGGCCA | 1 cut(s) | 167 |
| BccI | CCATC | 3 cut(s) | 157, 201, 262 |
| BcoDI | GTCTC | 1 cut(s) | 107 |
| BfaI | CTAG | 1 cut(s) | 179 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 119, 149 |
| BshFI | GGCC | 1 cut(s) | 167 |
| BsmAI | GTCTC | 1 cut(s) | 107 |
| BsnI | GGCC | 1 cut(s) | 167 |
| BspACI | CCGC | 1 cut(s) | 106 |
| BspANI | GGCC | 1 cut(s) | 167 |
| Bst6I | CTCTTC | 1 cut(s) | 151 |
| BstC8I | GCNNGC | 1 cut(s) | 46 |
| BstMAI | GTCTC | 1 cut(s) | 107 |
| BsuRI | GGCC | 1 cut(s) | 167 |
| Cac8I | GCNNGC | 1 cut(s) | 46 |
| Csp6I | GTAC | 1 cut(s) | 187 |
| CviAII | CATG | 2 cut(s) | 62, 232 |
| CviJI | RGCY | 5 cut(s) | 17, 28, 48, 90, 167 |
| CviKI_1 | RGCY | 5 cut(s) | 17, 28, 48, 90, 167 |
| CviQI | GTAC | 1 cut(s) | 187 |
| EaeI | YGGCCR | 1 cut(s) | 165 |
| Eam1104I | CTCTTC | 1 cut(s) | 151 |
| EarI | CTCTTC | 1 cut(s) | 151 |
| FaeI | CATG | 2 cut(s) | 65, 235 |
| FaiI | YATR | 7 cut(s) | 63, 96, 111, 138, 233, 240, 242 |
| FatI | CATG | 2 cut(s) | 61, 231 |
| FauNDI | CATATG | 1 cut(s) | 240 |
| FspBI | CTAG | 1 cut(s) | 179 |
| HaeIII | GGCC | 1 cut(s) | 167 |
| Hin1II | CATG | 2 cut(s) | 65, 235 |
| HinfI | GANTC | 1 cut(s) | 235 |
| Hpy166II | GTNNAC | 1 cut(s) | 189 |
| Hpy188I | TCNGA | 1 cut(s) | 69 |
| Hpy188III | TCNNGA | 1 cut(s) | 179 |
| Hpy8I | GTNNAC | 1 cut(s) | 189 |
| HpyAV | CCTTC | 1 cut(s) | 72 |
| HpyCH4V | TGCA | 1 cut(s) | 61 |
| Hsp92II | CATG | 2 cut(s) | 65, 235 |
| LpnPI | CCDG | 5 cut(s) | 30, 43, 69, 110, 112 |
| MaeI | CTAG | 1 cut(s) | 179 |
| MaeIII | GTNAC | 1 cut(s) | 101 |
| MboII | GAAGA | 1 cut(s) | 168 |
| MlsI | TGGCCA | 1 cut(s) | 167 |
| MluCI | AATT | 3 cut(s) | 4, 19, 37 |
| MluNI | TGGCCA | 1 cut(s) | 167 |
| MlyI | GAGTC | 1 cut(s) | 244 |
| MnlI | CCTC | 3 cut(s) | 121, 136, 177 |
| Mox20I | TGGCCA | 1 cut(s) | 167 |
| MscI | TGGCCA | 1 cut(s) | 167 |
| MseI | TTAA | 1 cut(s) | 271 |
| Msp20I | TGGCCA | 1 cut(s) | 167 |
| NdeI | CATATG | 1 cut(s) | 240 |
| NlaIII | CATG | 2 cut(s) | 65, 235 |
| PleI | GAGTC | 1 cut(s) | 243 |
| PpsI | GAGTC | 1 cut(s) | 243 |
| RsaI | GTAC | 1 cut(s) | 188 |
| RsaNI | GTAC | 1 cut(s) | 187 |
| SaqAI | TTAA | 1 cut(s) | 271 |
| SchI | GAGTC | 1 cut(s) | 244 |
| SetI | ASST | 2 cut(s) | 88, 188 |
| Sse9I | AATT | 3 cut(s) | 4, 19, 37 |
| SsiI | CCGC | 1 cut(s) | 106 |
| SspMI | CTAG | 1 cut(s) | 179 |
| TasI | AATT | 3 cut(s) | 4, 19, 37 |
| Tru1I | TTAA | 1 cut(s) | 271 |
| Tru9I | TTAA | 1 cut(s) | 271 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XbaI | TCTAGA | 1 cut(s) | 178 |
| XspI | CTAG | 1 cut(s) | 179 |