Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0007998

Physical Location & Seq

Genomic Coordinates Reverse (-)

73666481 .. 73668382

Gene Structure 1902 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG558400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGAAGGCAAAATCCATGTCTGTGCCAAACGTGGTGCTTGCTGTGCAATCTGGGTTGGTTTGTGAAAAAGAAGAAGATTCTTTGGTTGAGCAGATATTGCCTCCATGGGGAGATTTAGCAATTGATAAGGACCCGGTCCAGCCGGAGATTGAACCGGGTGTTGCCGTCCGGCCAGAGGTGACTTTAAATTGGAAGGATGTGTTGAATGTAGATAGGGTAAGTTTTTTAGAGGAGGTGGATGAAGAGACATTGTCAAAGCGGATTTTGGTGCTTAGTAGAACTAATAAAATTAGGAGTGCGTTGGAGCTGTTTACTTCCATGGAGTTATCAGGTCTTGTTCCTAGTGTACATGCGTGTAATTCACTGTTATCTTGTCTGTTGAGAAATGGGTTTTTTGATAATGGCTTGAGAGTGTTTGAGTTTATGAAGAGAAAGAAGTTAACTACGGGGCATAGTTATAGCCTGATACTTAAAGCAGTTTCAGATGCTCGTGGCTGCAACTCTGCCATTGAAATGTTTAGGGCAATGGAAGGGGAGAGTGGCGTGAGGGATGGTTTTGATACTGTCGTCTATAACACAATGATATCGGTTTGTGGTAAAGTGAACAATTGGCGTGAAACTGAGAGATTGTGGAGAGATATCAAGGAGAATGGTCATACTGGAACACAAATTACTTATTGCCTCTTAGTTAGCATTTTTGTTCGGTGTGGTGAGCATGAGCTAGCTCTTGATGCTTACAATGAGATGATTGAACACAAGTTTCAACCAGGGAATGATACAATGCAAGCTATAATTGGTGCTTGCTCGAAGGATGGAAAGTGGGATCTGGCACTAAACATCTTTCAGAATATGTTGGACAGTGGGCTCAAGCCAAATAGAATTGCATTCAATGCATTGATAAATTCGCTTGGAAAGGCTGCAGAGGTTGAACTAGCTTTTAGGGTATATAATATCATGAAATCTATGGATCATTCACCTGATCCTTATACATGGAAGGCGTTACTCAGTGCACTGTATAGGGCAAATCGACATGATGATGCTATTAAGCTCTTTGAGAGCATCAAGAGAAGTCGGGGCTCTCAATTGAACTTGCACTTGTACAATATGGCTTTAATGTCTTGCTCAAAGCTTGGACTATGGGATAAATCTTTGCAGCTTTTGTGGCAATTAGAAGCTTCTGAATTGTCAGTTTCAACAGCATCGTATAACCTTGTAATCAGTGCTTGCGAGATGGCAAGGAAGCCTGAAGTTGCACTGCAAGTTTATGAGCACATGGTTCACCAGAAGTGCACCCCAGACACATTTACTCATCTGTCACTAATAAGGAGTTGCATTTGGGGTTCTTTCTGGGAGGAAGCGGAGGAAATCCTGAATCACGCTGCACCAGATGCATCTCTTTATAACGCTGCCATTCAAGGAATGAGCTTTCGAGGCAAAACCGAAGTAGCAAAGAAACTTTACACGAATATGCGTAAGAGTGGCCTGCAACCAGATGGGAAAACACGTGCCGTTATGCTGCAAAACTTACGAAGACCTAGGAAGAAGCAGCCTTCTCGTTACAGAACAAGTAGGAGCAAGCTGTCGCCCAATCGCCGTTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

533

Amino Acids

60.33

Weight (kDa)

8.58

Isoelectric Point (pI)

43.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	187 - 231	1.3e-07	PPR repeat family
PPR_long	PF17177	195 - 350	4.9e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	249 - 305	2.4e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	260 - 304	7.4e-09	PPR repeat family
TPR_24	PF23276	262 - 381	9.9e-10	Fungal tetratrico peptide repeats
PPR_2	PF13041	291 - 339	3.1e-10	PPR repeat family
PPR_2	PF13041	398 - 444	2e-08	PPR repeat family
PPR_2	PF13041	462 - 509	4.5e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007998)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G29290 AT3G29290 AT3G29290 AT3G29290 AT3G29290
fragaria_vesca	FvH4_6g46090
malus_domestica	MD09G1077000.v1.1
prunus_persica	Prupe.3G247100_v2.0.a1 Prupe.3G247100_v2.0.a1 Prupe.3G247100_v2.0.a1
pyrus_communis	pycom09g00420
rosa_chinensis	RchiOBHm_Chr2g0164431 RchiOBHm_Chr2g0164471
rosa_laevigata	RLG00000021461
rosa_multiflora	Rmu_co8265609.1_g000001 Rmu_sc0037425.1_g000001
rosa_roxburghii	Rroxscaffold_2G00086570
rosa_rugosa	Rorug02G0508300
rosa_samantha	Rh2AG576600 Rh2BG587600 Rh2CG558400 Rh2DG598000
rosa_wichuraiana	Rw2G047760 Rw2G047860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1401
AciI	CCGC	2 cut(s)	259, 1358
AclWI	GGATC	3 cut(s)	831, 974, 975
AcoI	YGGCCR	1 cut(s)	170
AcsI	RAATTY	1 cut(s)	901
AcuI	CTGAAG	1 cut(s)	1266
AcvI	CACGTG	1 cut(s)	1505
AfaI	GTAC	2 cut(s)	348, 1100
AfiI	CCNNNNNNNGG	2 cut(s)	107, 175
AflIII	ACRYGT	1 cut(s)	1502
AjnI	CCWGG	1 cut(s)	766
Alw21I	GWGCWC	3 cut(s)	1012, 1272, 1292
Alw26I	GTCTC	1 cut(s)	239
Alw44I	GTGCAC	2 cut(s)	1008, 1288
AlwI	GGATC	3 cut(s)	831, 974, 975
AoxI	GGCC	2 cut(s)	170, 1480
ApaLI	GTGCAC	2 cut(s)	1008, 1288
ApeKI	GCWGC	7 cut(s)	495, 917, 1153, 1379, 1406, 1516, 1546
ApoI	RAATTY	1 cut(s)	901
ArsI	GACNNNNNNTTYG	1 cut(s)	34
AspA2I	CCTAGG	1 cut(s)	1535
AspS9I	GGNCC	2 cut(s)	130, 136
AsuC2I	CCSGG	2 cut(s)	134, 156
AsuHPI	GGTGA	4 cut(s)	190, 722, 966, 1271
AsuNHI	GCTAGC	1 cut(s)	721
AvaII	GGWCC	2 cut(s)	130, 136
AvrII	CCTAGG	1 cut(s)	1535
BaeGI	GKGCMC	2 cut(s)	1012, 1292
BaeI	ACNNNNGTAYC	2 cut(s)	552, 585
BanII	GRGCYC	2 cut(s)	867, 1079
BauI	CACGAG	1 cut(s)	489
BbrPI	CACGTG	1 cut(s)	1505
BbsI	GAAGAC	1 cut(s)	1537
Bbv12I	GWGCWC	3 cut(s)	1012, 1272, 1292
BbvI	GCAGC	7 cut(s)	482, 904, 1165, 1366, 1393, 1503, 1558
BccI	CCATC	4 cut(s)	545, 806, 1225, 1487
BceAI	ACGGC	3 cut(s)	149, 1493, 1578
BcgI	CGANNNNNNTGC	2 cut(s)	1535, 1569
BciT130I	CCWGG	1 cut(s)	768
BcnI	CCSGG	2 cut(s)	134, 156
BcoDI	GTCTC	1 cut(s)	239
BfaI	CTAG	4 cut(s)	342, 722, 932, 1536
BfmI	CTRYAG	1 cut(s)	918
BisI	GCNGC	7 cut(s)	496, 918, 1154, 1380, 1407, 1517, 1547
BlnI	CCTAGG	1 cut(s)	1535
BlsI	GCNGC	7 cut(s)	497, 919, 1155, 1381, 1408, 1518, 1548
Bme1390I	CCNGG	3 cut(s)	134, 156, 768
Bme18I	GGWCC	2 cut(s)	130, 136
BmgT120I	GGNCC	2 cut(s)	130, 136
BmiI	GGNNCC	1 cut(s)	132
BmrFI	CCNGG	3 cut(s)	134, 156, 768
BmsI	GCATC	7 cut(s)	475, 721, 1027, 1068, 1208, 1378, 1400
BmtI	GCTAGC	1 cut(s)	725
BpiI	GAAGAC	1 cut(s)	1537
BpuEI	CTTGAG	2 cut(s)	427, 851
BpuMI	CCSGG	2 cut(s)	134, 156
BsaAI	YACGTR	1 cut(s)	1505
BsaJI	CCNNGG	4 cut(s)	104, 318, 767, 1535
Bsc4I	CCNNNNNNNGG	2 cut(s)	107, 175
Bse1I	ACTGG	1 cut(s)	664
Bse3DI	GCAATG	1 cut(s)	531
BseBI	CCWGG	1 cut(s)	768
BseDI	CCNNGG	4 cut(s)	104, 318, 767, 1535
BseGI	GGATG	4 cut(s)	202, 244, 556, 817
BseLI	CCNNNNNNNGG	2 cut(s)	107, 175
BseMI	GCAATG	1 cut(s)	531
BseMII	CTCAG	2 cut(s)	612, 1018
BseNI	ACTGG	1 cut(s)	664
BseRI	GAGGAG	1 cut(s)	245
BseSI	GKGCMC	2 cut(s)	1012, 1292
BseXI	GCAGC	7 cut(s)	482, 904, 1165, 1366, 1393, 1503, 1558
BsgI	GTGCAG	1 cut(s)	1365
BshFI	GGCC	2 cut(s)	172, 1482
BsiHKAI	GWGCWC	3 cut(s)	1012, 1272, 1292
BsiSI	CCGG	4 cut(s)	134, 143, 155, 169
BslI	CCNNNNNNNGG	2 cut(s)	107, 175
BsmAI	GTCTC	1 cut(s)	239
BsmI	GAATGC	1 cut(s)	884
BsnI	GGCC	2 cut(s)	172, 1482
Bsp1286I	GDGCHC	5 cut(s)	867, 1012, 1079, 1272, 1292
Bsp1407I	TGTACA	2 cut(s)	346, 1098
Bsp143I	GATC	3 cut(s)	823, 967, 979
Bsp19I	CCATGG	2 cut(s)	104, 318
BspACI	CCGC	2 cut(s)	259, 1358
BspANI	GGCC	2 cut(s)	172, 1482
BspCNI	CTCAG	2 cut(s)	613, 1017
BspHI	TCATGA	1 cut(s)	954
BspLI	GGNNCC	1 cut(s)	132
BspMAI	CTGCAG	1 cut(s)	922
BspOI	GCTAGC	1 cut(s)	725
BspPI	GGATC	3 cut(s)	831, 974, 975
BsrDI	GCAATG	1 cut(s)	531
BsrGI	TGTACA	2 cut(s)	346, 1098
BsrI	ACTGG	1 cut(s)	664
BssECI	CCNNGG	4 cut(s)	104, 318, 767, 1535
BssMI	GATC	3 cut(s)	823, 967, 979
BssSI	CACGAG	1 cut(s)	489
BssT1I	CCWWGG	3 cut(s)	104, 318, 1535
Bst2BI	CACGAG	1 cut(s)	489
Bst2UI	CCWGG	1 cut(s)	768
Bst4CI	ACNGT	4 cut(s)	366, 565, 860, 1014
Bst6I	CTCTTC	2 cut(s)	237, 422
BstAPI	GCANNNNNTGC	3 cut(s)	97, 890, 1388
BstAUI	TGTACA	2 cut(s)	346, 1098
BstBAI	YACGTR	1 cut(s)	1505
BstC8I	GCNNGC	7 cut(s)	39, 723, 786, 802, 1225, 1484, 1577
BstDEI	CTNAG	4 cut(s)	272, 621, 685, 1004
BstDSI	CCRYGG	2 cut(s)	104, 318
BstF5I	GGATG	4 cut(s)	202, 244, 556, 817
BstKTI	GATC	3 cut(s)	826, 970, 982
BstMAI	GTCTC	1 cut(s)	239
BstMBI	GATC	3 cut(s)	823, 967, 979
BstMWI	GCNNNNNNNGC	7 cut(s)	43, 97, 731, 890, 1162, 1388, 1431
BstNI	CCWGG	1 cut(s)	768
BstNSI	RCATGY	1 cut(s)	353
BstSCI	CCNGG	3 cut(s)	132, 154, 766
BstSFI	CTRYAG	1 cut(s)	918
BstSLI	GKGCMC	2 cut(s)	1012, 1292
BstV1I	GCAGC	7 cut(s)	482, 904, 1165, 1366, 1393, 1503, 1558
BstV2I	GAAGAC	1 cut(s)	1537
BstX2I	RGATCY	1 cut(s)	823
BstYI	RGATCY	1 cut(s)	823
BsuRI	GGCC	2 cut(s)	172, 1482
BtgI	CCRYGG	2 cut(s)	104, 318
BtsCI	GGATG	4 cut(s)	202, 244, 556, 817
BtsI	GCAGTG	1 cut(s)	1253
BtsIMutI	CAGTG	6 cut(s)	362, 865, 1010, 1012, 1225, 1253
Cac8I	GCNNGC	7 cut(s)	39, 723, 786, 802, 1225, 1484, 1577
CciI	TCATGA	1 cut(s)	954
Cfr13I	GGNCC	2 cut(s)	130, 136
Csp6I	GTAC	2 cut(s)	347, 1099
CviAII	CATG	9 cut(s)	16, 105, 319, 350, 716, 955, 990, 1031, 1273
CviQI	GTAC	2 cut(s)	347, 1099
DdeI	CTNAG	4 cut(s)	272, 621, 685, 1004
DpnI	GATC	3 cut(s)	825, 969, 981
DpnII	GATC	3 cut(s)	823, 967, 979
DraI	TTTAAA	1 cut(s)	186
EaeI	YGGCCR	1 cut(s)	170
Eam1104I	CTCTTC	2 cut(s)	237, 422
EarI	CTCTTC	2 cut(s)	237, 422
Eco130I	CCWWGG	3 cut(s)	104, 318, 1535
Eco24I	GRGCYC	2 cut(s)	867, 1079
Eco32I	GATATC	2 cut(s)	585, 640
Eco47I	GGWCC	2 cut(s)	130, 136
Eco57I	CTGAAG	1 cut(s)	1266
Eco72I	CACGTG	1 cut(s)	1505
EcoO109I	RGGNCCY	1 cut(s)	130
EcoRII	CCWGG	1 cut(s)	766
EcoRV	GATATC	2 cut(s)	585, 640
EcoT14I	CCWWGG	3 cut(s)	104, 318, 1535
EcoT22I	ATGCAT	2 cut(s)	895, 1393
EcoT38I	GRGCYC	2 cut(s)	867, 1079
ErhI	CCWWGG	3 cut(s)	104, 318, 1535
FaeI	CATG	9 cut(s)	19, 108, 322, 353, 719, 958, 993, 1034, 1276
FatI	CATG	9 cut(s)	15, 104, 318, 349, 715, 954, 989, 1030, 1272
Fnu4HI	GCNGC	7 cut(s)	496, 918, 1154, 1380, 1407, 1517, 1547
FokI	GGATG	4 cut(s)	209, 251, 563, 824
FriOI	GRGCYC	2 cut(s)	867, 1079
Fsp4HI	GCNGC	7 cut(s)	496, 918, 1154, 1380, 1407, 1517, 1547
FspBI	CTAG	4 cut(s)	342, 722, 932, 1536
GluI	GCNGC	7 cut(s)	496, 918, 1154, 1380, 1407, 1517, 1547
HaeIII	GGCC	2 cut(s)	172, 1482
HapII	CCGG	4 cut(s)	134, 143, 155, 169
Hin1II	CATG	9 cut(s)	19, 108, 322, 353, 719, 958, 993, 1034, 1276
HincII	GTYRAC	1 cut(s)	441
HindII	GTYRAC	1 cut(s)	441
HindIII	AAGCTT	2 cut(s)	1127, 1173
HinfI	GANTC	2 cut(s)	77, 1372
HpaI	GTTAAC	1 cut(s)	441
HpaII	CCGG	4 cut(s)	134, 143, 155, 169
HphI	GGTGA	4 cut(s)	190, 722, 966, 1271
Hpy166II	GTNNAC	7 cut(s)	312, 347, 441, 604, 1010, 1279, 1290
Hpy188I	TCNGA	3 cut(s)	484, 846, 1180
Hpy188III	TCNNGA	4 cut(s)	728, 955, 1063, 1369
Hpy8I	GTNNAC	7 cut(s)	312, 347, 441, 604, 1010, 1279, 1290
HpyAV	CCTTC	5 cut(s)	187, 524, 802, 988, 1560
HpyCH4III	ACNGT	4 cut(s)	366, 565, 860, 1014
HpyCH4IV	ACGT	2 cut(s)	30, 1504
HpyF10VI	GCNNNNNNNGC	7 cut(s)	43, 97, 731, 890, 1162, 1388, 1431
HpyF3I	CTNAG	4 cut(s)	272, 621, 685, 1004
HpySE526I	ACGT	2 cut(s)	30, 1504
Hsp92II	CATG	9 cut(s)	19, 108, 322, 353, 719, 958, 993, 1034, 1276
KspAI	GTTAAC	1 cut(s)	441
Kzo9I	GATC	3 cut(s)	823, 967, 979
LmnI	GCTCC	2 cut(s)	304, 1572
Lsp1109I	GCAGC	7 cut(s)	482, 904, 1165, 1366, 1393, 1503, 1558
LweI	GCATC	7 cut(s)	475, 721, 1027, 1068, 1208, 1378, 1400
MaeI	CTAG	4 cut(s)	342, 722, 932, 1536
MaeII	ACGT	2 cut(s)	30, 1504
MaeIII	GTNAC	5 cut(s)	178, 999, 1314, 1556, 1595
MalI	GATC	3 cut(s)	825, 969, 981
MboI	GATC	3 cut(s)	823, 967, 979
MboII	GAAGA	6 cut(s)	83, 86, 254, 439, 1542, 1552
MfeI	CAATTG	3 cut(s)	120, 607, 1082
MflI	RGATCY	1 cut(s)	823
MhlI	GDGCHC	5 cut(s)	867, 1012, 1079, 1272, 1292
MmeI	TCCRAC	2 cut(s)	282, 834
Mph1103I	ATGCAT	2 cut(s)	895, 1393
MseI	TTAA	5 cut(s)	185, 440, 471, 1044, 1112
MslI	CAYNNNNRTG	4 cut(s)	20, 512, 1035, 1466
MspI	CCGG	4 cut(s)	134, 143, 155, 169
MspR9I	CCNGG	3 cut(s)	134, 156, 768
MunI	CAATTG	3 cut(s)	120, 607, 1082
Mva1269I	GAATGC	1 cut(s)	884
MvaI	CCWGG	1 cut(s)	768
MwoI	GCNNNNNNNGC	7 cut(s)	43, 97, 731, 890, 1162, 1388, 1431
NciI	CCSGG	2 cut(s)	134, 156
NcoI	CCATGG	2 cut(s)	104, 318
NdeII	GATC	3 cut(s)	823, 967, 979
NheI	GCTAGC	1 cut(s)	721
NlaIII	CATG	9 cut(s)	19, 108, 322, 353, 719, 958, 993, 1034, 1276
NlaIV	GGNNCC	1 cut(s)	132
NmuCI	GTSAC	2 cut(s)	178, 1314
NsiI	ATGCAT	2 cut(s)	895, 1393
NspI	RCATGY	1 cut(s)	353
PagI	TCATGA	1 cut(s)	954
PctI	GAATGC	1 cut(s)	884
PfeI	GAWTC	2 cut(s)	77, 1372
PflFI	GACNNNGTC	2 cut(s)	134, 250
PkrI	GCNGC	7 cut(s)	497, 919, 1155, 1381, 1408, 1518, 1548
PmaCI	CACGTG	1 cut(s)	1505
PmlI	CACGTG	1 cut(s)	1505
Ppu21I	YACGTR	1 cut(s)	1505
PpuMI	RGGWCCY	1 cut(s)	130
PsiI	TTATAA	1 cut(s)	1401
Psp5II	RGGWCCY	1 cut(s)	130
Psp6I	CCWGG	1 cut(s)	766
PspCI	CACGTG	1 cut(s)	1505
PspGI	CCWGG	1 cut(s)	766
PspN4I	GGNNCC	1 cut(s)	132
PspPI	GGNCC	2 cut(s)	130, 136
PspPPI	RGGWCCY	1 cut(s)	130
PsrI	GAACNNNNNNTAC	2 cut(s)	655, 687
PstI	CTGCAG	1 cut(s)	922
PsuI	RGATCY	1 cut(s)	823
PsyI	GACNNNGTC	2 cut(s)	134, 250
RsaI	GTAC	2 cut(s)	348, 1100
RsaNI	GTAC	2 cut(s)	347, 1099
RseI	CAYNNNNRTG	4 cut(s)	20, 512, 1035, 1466
SaqAI	TTAA	5 cut(s)	185, 440, 471, 1044, 1112
SatI	GCNGC	7 cut(s)	496, 918, 1154, 1380, 1407, 1517, 1547
Sau3AI	GATC	3 cut(s)	823, 967, 979
Sau96I	GGNCC	2 cut(s)	130, 136
ScrFI	CCNGG	3 cut(s)	134, 156, 768
SduI	GDGCHC	5 cut(s)	867, 1012, 1079, 1272, 1292
SfaNI	GCATC	7 cut(s)	475, 721, 1027, 1068, 1208, 1378, 1400
SfcI	CTRYAG	1 cut(s)	918
SinI	GGWCC	2 cut(s)	130, 136
SmiMI	CAYNNNNRTG	4 cut(s)	20, 512, 1035, 1466
SmlI	CTYRAG	2 cut(s)	406, 866
SmoI	CTYRAG	2 cut(s)	406, 866
SsiI	CCGC	2 cut(s)	259, 1358
SspMI	CTAG	4 cut(s)	342, 722, 932, 1536
StyD4I	CCNGG	3 cut(s)	132, 154, 766
StyI	CCWWGG	3 cut(s)	104, 318, 1535
TaaI	ACNGT	4 cut(s)	366, 565, 860, 1014
TaiI	ACGT	2 cut(s)	33, 1507
TaqI	TCGA	3 cut(s)	806, 1027, 1429
TatI	WGTACW	2 cut(s)	346, 1098
TfiI	GAWTC	2 cut(s)	77, 1372
Tru1I	TTAA	5 cut(s)	185, 440, 471, 1044, 1112
Tru9I	TTAA	5 cut(s)	185, 440, 471, 1044, 1112
TscAI	CASTG	6 cut(s)	369, 865, 1012, 1017, 1225, 1260
TseFI	GTSAC	2 cut(s)	178, 1314
TseI	GCWGC	7 cut(s)	495, 917, 1153, 1379, 1406, 1516, 1546
Tsp45I	GTSAC	2 cut(s)	178, 1314
TspDTI	ATGAA	4 cut(s)	17, 255, 440, 971
TspRI	CASTG	6 cut(s)	369, 865, 1012, 1017, 1225, 1260
Tth111I	GACNNNGTC	2 cut(s)	134, 250
VneI	GTGCAC	2 cut(s)	1008, 1288
VpaK11BI	GGWCC	2 cut(s)	130, 136
XapI	RAATTY	1 cut(s)	901
XceI	RCATGY	1 cut(s)	353
XmaJI	CCTAGG	1 cut(s)	1535
XspI	CTAG	4 cut(s)	342, 722, 932, 1536
Zsp2I	ATGCAT	2 cut(s)	895, 1393

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.