Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0007998

Physical Location & Seq

Genomic Coordinates Reverse (-)

75052615 .. 75054678

Gene Structure 2064 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G047760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGGGTGAGGTTCTGAAACCTTCACTCTCCCTTATGTTAATCTCAGCTAGTTCTGGGTTTCGGTATCGCCATTCTAACCAGCCTTTATATTATGATGTGCCTAAAACATGTTCAAGTACACATAACCTTAGCTTAGTTTCCATGTGGGTACCCAGTGTGATTAGAATGAAGGCGAAATCCATGTCTGTGCCAAACGTGGTGCTTGGTGTGCAATCTGGGTTGGTTTGTGAAAAAGAAGAAGATTCTTTGGTTGAGCAGATATTGCCTCCATGGGGAGATTTAGCAATTGATAAGGACCCGGTCCAGCCGGAGATTGAACCGGGGGTTGCCGTCCGGCCAGAGGTGACTTTAAATTGGAAGGATGTGTTGAATGTAGATAGGGTAAGTTTTTTAGAGGAGGTGGATGAAGAGACATTGTCAAAGCGGATTTTGGTGCTTAGTAGAACTAATAAAATTAGGATACATGCGTGTAATTCACTGTTATCTTGTCTGTTGAGAAATGGGTTTTTTGATAATGGCTTGAGAGTGTTTGAGTTTATGAAGAGAAAGAAGTTAACTACGGGGCATAGTTATAGCCTGATACTTAAAGCAGTTTCAGATGCTCGTGGCTGCAACTCTGCCATTGAAATGTTTAGGGCAATGGAAGGGGAGAGTGGCGTGAGGGATGGTTTTGATACTGTCGTCTATAACACAATGATATCGGTTTGTGGTAAAGTGAACAATTGGCGTGAAACTGAGAGATTGTGGAGAGATATCAAGGAGAATGGTCATACTGGAACACAAATTACTTATTGCCTCTTAGTTAGCATTTTTGTTCGGTGTGGTGAGCATGAGCTAGCTCTTGATGCTTACAATGAGATGATTGAACACAAGTTTCAACCAGGGAATGATACAATGCAAGCTATAATTGGTGCTTGCTCGAAGGATGGAAAGTGGGATCTGGCACTAAACATCTTTCAGAATATGTTGGACAGTGGGCTCAAGCCAAATAGAATTGCATTCAATGCATTGATAAATTCGCTTGGAAAGGCTGCAGAGGTTGATCTAGCTTTTAGGGTATATAATATCATGAAATCTATGGATCATTCACCTGATCCTTATACATGGAAGGCGTTACTCAGTGCACTGTATAGGGCAAATCGACATGATGATGCTATTAAGCTCTTTGAGAGCATCAAGAGAAGTCGGGGCTCTCAATTGAACTTGCACTTGTACAATATGGCTTTAATGTCTTGCTCGAAGCTTGGGCTATGGGATAAATCTTTGCAGCTTTTGTGGCAATTAGAAGCTTCTGAATTGTCAGTTTCAACAGCATCGTATAACCTTGTAATCAGTGCTTGCGAGATGGCAAGGAAGCCTGAAGTTGCACTGCAAGTTTATGAGCACATGGTTCACCAGAAGTGCACCCCAGACACATTTACTCATCTGTCACTAATAAGGAGTTGCATTTGGGGTTCTTTCTGGGAGGAAGTGGAGGAAATCCTGAATCACGCTGCACCAGATGCATCTCTTTATAACGCTGCCATTCAAGGAATGAGCTTTCGAGGCAAAACCGAAGTAGCAAAGAAACTTTACACGAATATGCGTAAGAGTGGCCTCCGACCAGATGGGAAAACACGTGCCGTTATGCTGCAAAACTTACGAAGACCTAGGAAGAAGCAGCCTTCTCGTTACAGAACAAGTAGGAGCAAGCTGTCGCCCAATCACCGTTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

571

Amino Acids

64.76

Weight (kDa)

8.92

Isoelectric Point (pI)

41.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	225 - 269	1.4e-07	PPR repeat family
PPR_long	PF17177	281 - 387	2e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	287 - 343	2.7e-07	Pentatricopeptide repeat domain
TPR_24	PF23276	299 - 462	9.9e-11	Fungal tetratrico peptide repeats
PPR_1	PF12854	326 - 358	7.8e-06	PPR repeat
PPR_2	PF13041	329 - 377	4.3e-10	PPR repeat family
PPR_2	PF13041	436 - 482	2.1e-08	PPR repeat family
PPR_2	PF13041	500 - 547	8.8e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007998)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G29290 AT3G29290 AT3G29290 AT3G29290 AT3G29290
fragaria_vesca	FvH4_6g46090
malus_domestica	MD09G1077000.v1.1
prunus_persica	Prupe.3G247100_v2.0.a1 Prupe.3G247100_v2.0.a1 Prupe.3G247100_v2.0.a1
pyrus_communis	pycom09g00420
rosa_chinensis	RchiOBHm_Chr2g0164431 RchiOBHm_Chr2g0164471
rosa_laevigata	RLG00000021461
rosa_multiflora	Rmu_co8265609.1_g000001 Rmu_sc0037425.1_g000001
rosa_roxburghii	Rroxscaffold_2G00086570
rosa_rugosa	Rorug02G0508300
rosa_samantha	Rh2AG576600 Rh2BG587600 Rh2CG558400 Rh2DG598000
rosa_wichuraiana	Rw2G047760 Rw2G047860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1515
Acc65I	GGTACC	1 cut(s)	148
AccB1I	GGYRCC	1 cut(s)	148
AciI	CCGC	1 cut(s)	424
AclWI	GGATC	3 cut(s)	945, 1088, 1089
AcoI	YGGCCR	1 cut(s)	335
AcsI	RAATTY	1 cut(s)	1015
AcuI	CTGAAG	1 cut(s)	1380
AcvI	CACGTG	1 cut(s)	1619
AfaI	GTAC	3 cut(s)	118, 150, 1214
AfiI	CCNNNNNNNGG	2 cut(s)	272, 340
AflIII	ACRYGT	2 cut(s)	107, 1616
AjnI	CCWGG	1 cut(s)	880
Alw21I	GWGCWC	3 cut(s)	1126, 1386, 1406
Alw26I	GTCTC	1 cut(s)	404
Alw44I	GTGCAC	2 cut(s)	1122, 1402
AlwI	GGATC	3 cut(s)	945, 1088, 1089
AoxI	GGCC	2 cut(s)	335, 1594
ApaLI	GTGCAC	2 cut(s)	1122, 1402
ApeKI	GCWGC	7 cut(s)	609, 1031, 1267, 1493, 1520, 1630, 1660
ApoI	RAATTY	1 cut(s)	1015
ArsI	GACNNNNNNTTYG	2 cut(s)	167, 199
Asp718I	GGTACC	1 cut(s)	148
AspA2I	CCTAGG	1 cut(s)	1649
AspS9I	GGNCC	2 cut(s)	295, 301
AsuC2I	CCSGG	2 cut(s)	299, 321
AsuHPI	GGTGA	6 cut(s)	17, 355, 836, 1080, 1385, 1697
AsuNHI	GCTAGC	1 cut(s)	835
AvaII	GGWCC	2 cut(s)	295, 301
AvrII	CCTAGG	1 cut(s)	1649
BaeGI	GKGCMC	2 cut(s)	1126, 1406
BaeI	ACNNNNGTAYC	4 cut(s)	452, 485, 666, 699
BanI	GGYRCC	1 cut(s)	148
BanII	GRGCYC	2 cut(s)	981, 1193
BauI	CACGAG	1 cut(s)	603
BbrPI	CACGTG	1 cut(s)	1619
BbsI	GAAGAC	1 cut(s)	1651
Bbv12I	GWGCWC	3 cut(s)	1126, 1386, 1406
BbvI	GCAGC	7 cut(s)	596, 1018, 1279, 1480, 1507, 1617, 1672
BccI	CCATC	4 cut(s)	659, 920, 1339, 1601
BceAI	ACGGC	2 cut(s)	314, 1607
BcgI	CGANNNNNNTGC	2 cut(s)	1649, 1683
BciT130I	CCWGG	1 cut(s)	882
BciVI	GTATCC	1 cut(s)	453
BcnI	CCSGG	2 cut(s)	299, 321
BcoDI	GTCTC	1 cut(s)	404
BfaI	CTAG	4 cut(s)	48, 836, 1046, 1650
BfmI	CTRYAG	1 cut(s)	1032
BfuI	GTATCC	1 cut(s)	453
BisI	GCNGC	7 cut(s)	610, 1032, 1268, 1494, 1521, 1631, 1661
BlnI	CCTAGG	1 cut(s)	1649
BlsI	GCNGC	7 cut(s)	611, 1033, 1269, 1495, 1522, 1632, 1662
Bme1390I	CCNGG	3 cut(s)	299, 321, 882
Bme18I	GGWCC	2 cut(s)	295, 301
BmgT120I	GGNCC	2 cut(s)	295, 301
BmiI	GGNNCC	2 cut(s)	150, 297
BmrFI	CCNGG	3 cut(s)	299, 321, 882
BmrI	ACTGGG	1 cut(s)	147
BmsI	GCATC	7 cut(s)	589, 835, 1141, 1182, 1322, 1492, 1514
BmtI	GCTAGC	1 cut(s)	839
BmuI	ACTGGG	1 cut(s)	147
BpiI	GAAGAC	1 cut(s)	1651
Bpu10I	CCTNAGC	1 cut(s)	128
BpuEI	CTTGAG	2 cut(s)	541, 965
BpuMI	CCSGG	2 cut(s)	299, 321
BsaAI	YACGTR	1 cut(s)	1619
BsaJI	CCNNGG	4 cut(s)	269, 320, 881, 1649
Bsc4I	CCNNNNNNNGG	2 cut(s)	272, 340
Bse1I	ACTGG	2 cut(s)	153, 778
Bse3DI	GCAATG	1 cut(s)	645
BseBI	CCWGG	1 cut(s)	882
BseDI	CCNNGG	4 cut(s)	269, 320, 881, 1649
BseGI	GGATG	4 cut(s)	367, 409, 670, 931
BseLI	CCNNNNNNNGG	2 cut(s)	272, 340
BseMI	GCAATG	1 cut(s)	645
BseMII	CTCAG	3 cut(s)	57, 726, 1132
BseNI	ACTGG	2 cut(s)	153, 778
BseRI	GAGGAG	1 cut(s)	410
BseSI	GKGCMC	2 cut(s)	1126, 1406
BseXI	GCAGC	7 cut(s)	596, 1018, 1279, 1480, 1507, 1617, 1672
BsgI	GTGCAG	1 cut(s)	1479
BshFI	GGCC	2 cut(s)	337, 1596
BshNI	GGYRCC	1 cut(s)	148
BsiHKAI	GWGCWC	3 cut(s)	1126, 1386, 1406
BsiSI	CCGG	4 cut(s)	299, 308, 320, 334
BslI	CCNNNNNNNGG	2 cut(s)	272, 340
BsmAI	GTCTC	1 cut(s)	404
BsmI	GAATGC	1 cut(s)	998
BsnI	GGCC	2 cut(s)	337, 1596
Bsp1286I	GDGCHC	5 cut(s)	981, 1126, 1193, 1386, 1406
Bsp1407I	TGTACA	1 cut(s)	1212
Bsp143I	GATC	4 cut(s)	937, 1042, 1081, 1093
Bsp19I	CCATGG	1 cut(s)	269
BspACI	CCGC	1 cut(s)	424
BspANI	GGCC	2 cut(s)	337, 1596
BspCNI	CTCAG	3 cut(s)	56, 727, 1131
BspHI	TCATGA	1 cut(s)	1068
BspLI	GGNNCC	2 cut(s)	150, 297
BspMAI	CTGCAG	1 cut(s)	1036
BspOI	GCTAGC	1 cut(s)	839
BspPI	GGATC	3 cut(s)	945, 1088, 1089
BspT107I	GGYRCC	1 cut(s)	148
BsrDI	GCAATG	1 cut(s)	645
BsrGI	TGTACA	1 cut(s)	1212
BsrI	ACTGG	2 cut(s)	153, 778
BssECI	CCNNGG	4 cut(s)	269, 320, 881, 1649
BssMI	GATC	4 cut(s)	937, 1042, 1081, 1093
BssSI	CACGAG	1 cut(s)	603
BssT1I	CCWWGG	2 cut(s)	269, 1649
Bst2BI	CACGAG	1 cut(s)	603
Bst2UI	CCWGG	1 cut(s)	882
Bst4CI	ACNGT	5 cut(s)	480, 679, 974, 1128, 1709
Bst6I	CTCTTC	2 cut(s)	402, 536
BstAPI	GCANNNNNTGC	3 cut(s)	262, 1004, 1502
BstAUI	TGTACA	1 cut(s)	1212
BstBAI	YACGTR	1 cut(s)	1619
BstC8I	GCNNGC	5 cut(s)	837, 900, 916, 1339, 1691
BstDEI	CTNAG	7 cut(s)	43, 128, 133, 437, 735, 799, 1118
BstDSI	CCRYGG	1 cut(s)	269
BstF5I	GGATG	4 cut(s)	367, 409, 670, 931
BstKTI	GATC	4 cut(s)	940, 1045, 1084, 1096
BstMAI	GTCTC	1 cut(s)	404
BstMBI	GATC	4 cut(s)	937, 1042, 1081, 1093
BstMWI	GCNNNNNNNGC	7 cut(s)	208, 262, 845, 1004, 1276, 1502, 1545
BstNI	CCWGG	1 cut(s)	882
BstNSI	RCATGY	2 cut(s)	111, 467
BstSCI	CCNGG	3 cut(s)	297, 319, 880
BstSFI	CTRYAG	1 cut(s)	1032
BstSLI	GKGCMC	2 cut(s)	1126, 1406
BstV1I	GCAGC	7 cut(s)	596, 1018, 1279, 1480, 1507, 1617, 1672
BstV2I	GAAGAC	1 cut(s)	1651
BstX2I	RGATCY	1 cut(s)	937
BstYI	RGATCY	1 cut(s)	937
BsuI	GTATCC	1 cut(s)	453
BsuRI	GGCC	2 cut(s)	337, 1596
BtgI	CCRYGG	1 cut(s)	269
BtsCI	GGATG	4 cut(s)	367, 409, 670, 931
BtsI	GCAGTG	1 cut(s)	1367
BtsIMutI	CAGTG	7 cut(s)	160, 476, 979, 1124, 1126, 1339, 1367
Cac8I	GCNNGC	5 cut(s)	837, 900, 916, 1339, 1691
CciI	TCATGA	1 cut(s)	1068
Cfr13I	GGNCC	2 cut(s)	295, 301
Csp6I	GTAC	3 cut(s)	117, 149, 1213
CviQI	GTAC	3 cut(s)	117, 149, 1213
DdeI	CTNAG	7 cut(s)	43, 128, 133, 437, 735, 799, 1118
DpnI	GATC	4 cut(s)	939, 1044, 1083, 1095
DpnII	GATC	4 cut(s)	937, 1042, 1081, 1093
DraI	TTTAAA	1 cut(s)	351
EaeI	YGGCCR	1 cut(s)	335
Eam1104I	CTCTTC	2 cut(s)	402, 536
EarI	CTCTTC	2 cut(s)	402, 536
Eco130I	CCWWGG	2 cut(s)	269, 1649
Eco24I	GRGCYC	2 cut(s)	981, 1193
Eco32I	GATATC	2 cut(s)	699, 754
Eco47I	GGWCC	2 cut(s)	295, 301
Eco57I	CTGAAG	1 cut(s)	1380
Eco72I	CACGTG	1 cut(s)	1619
EcoO109I	RGGNCCY	1 cut(s)	295
EcoRII	CCWGG	1 cut(s)	880
EcoRV	GATATC	2 cut(s)	699, 754
EcoT14I	CCWWGG	2 cut(s)	269, 1649
EcoT22I	ATGCAT	2 cut(s)	1009, 1507
EcoT38I	GRGCYC	2 cut(s)	981, 1193
ErhI	CCWWGG	2 cut(s)	269, 1649
Fnu4HI	GCNGC	7 cut(s)	610, 1032, 1268, 1494, 1521, 1631, 1661
FokI	GGATG	4 cut(s)	374, 416, 677, 938
FriOI	GRGCYC	2 cut(s)	981, 1193
Fsp4HI	GCNGC	7 cut(s)	610, 1032, 1268, 1494, 1521, 1631, 1661
FspBI	CTAG	4 cut(s)	48, 836, 1046, 1650
GluI	GCNGC	7 cut(s)	610, 1032, 1268, 1494, 1521, 1631, 1661
HaeIII	GGCC	2 cut(s)	337, 1596
HapII	CCGG	4 cut(s)	299, 308, 320, 334
HincII	GTYRAC	1 cut(s)	555
HindII	GTYRAC	1 cut(s)	555
HindIII	AAGCTT	2 cut(s)	1241, 1287
HinfI	GANTC	2 cut(s)	242, 1486
HpaI	GTTAAC	1 cut(s)	555
HpaII	CCGG	4 cut(s)	299, 308, 320, 334
HphI	GGTGA	6 cut(s)	17, 355, 836, 1080, 1385, 1697
Hpy166II	GTNNAC	6 cut(s)	119, 555, 718, 1124, 1393, 1404
Hpy188I	TCNGA	5 cut(s)	15, 598, 960, 1294, 1601
Hpy188III	TCNNGA	4 cut(s)	842, 1069, 1177, 1483
Hpy8I	GTNNAC	6 cut(s)	119, 555, 718, 1124, 1393, 1404
HpyAV	CCTTC	7 cut(s)	30, 163, 352, 638, 916, 1102, 1674
HpyCH4III	ACNGT	5 cut(s)	480, 679, 974, 1128, 1709
HpyCH4IV	ACGT	2 cut(s)	195, 1618
HpyF10VI	GCNNNNNNNGC	7 cut(s)	208, 262, 845, 1004, 1276, 1502, 1545
HpyF3I	CTNAG	7 cut(s)	43, 128, 133, 437, 735, 799, 1118
HpySE526I	ACGT	2 cut(s)	195, 1618
KpnI	GGTACC	1 cut(s)	152
KspAI	GTTAAC	1 cut(s)	555
Kzo9I	GATC	4 cut(s)	937, 1042, 1081, 1093
LmnI	GCTCC	1 cut(s)	1686
Lsp1109I	GCAGC	7 cut(s)	596, 1018, 1279, 1480, 1507, 1617, 1672
LweI	GCATC	7 cut(s)	589, 835, 1141, 1182, 1322, 1492, 1514
MaeI	CTAG	4 cut(s)	48, 836, 1046, 1650
MaeII	ACGT	2 cut(s)	195, 1618
MaeIII	GTNAC	5 cut(s)	343, 1113, 1428, 1670, 1709
MalI	GATC	4 cut(s)	939, 1044, 1083, 1095
MboI	GATC	4 cut(s)	937, 1042, 1081, 1093
MboII	GAAGA	6 cut(s)	248, 251, 419, 553, 1656, 1666
MfeI	CAATTG	3 cut(s)	285, 721, 1196
MflI	RGATCY	1 cut(s)	937
MhlI	GDGCHC	5 cut(s)	981, 1126, 1193, 1386, 1406
MmeI	TCCRAC	2 cut(s)	948, 1624
Mph1103I	ATGCAT	2 cut(s)	1009, 1507
MseI	TTAA	6 cut(s)	38, 350, 554, 585, 1158, 1226
MslI	CAYNNNNRTG	4 cut(s)	185, 626, 1149, 1580
MspI	CCGG	4 cut(s)	299, 308, 320, 334
MspR9I	CCNGG	3 cut(s)	299, 321, 882
MunI	CAATTG	3 cut(s)	285, 721, 1196
Mva1269I	GAATGC	1 cut(s)	998
MvaI	CCWGG	1 cut(s)	882
MwoI	GCNNNNNNNGC	7 cut(s)	208, 262, 845, 1004, 1276, 1502, 1545
NciI	CCSGG	2 cut(s)	299, 321
NcoI	CCATGG	1 cut(s)	269
NdeII	GATC	4 cut(s)	937, 1042, 1081, 1093
NheI	GCTAGC	1 cut(s)	835
NlaIV	GGNNCC	2 cut(s)	150, 297
NmuCI	GTSAC	2 cut(s)	343, 1428
NsiI	ATGCAT	2 cut(s)	1009, 1507
NspI	RCATGY	2 cut(s)	111, 467
PagI	TCATGA	1 cut(s)	1068
PciI	ACATGT	1 cut(s)	107
PctI	GAATGC	1 cut(s)	998
PfeI	GAWTC	2 cut(s)	242, 1486
PflFI	GACNNNGTC	2 cut(s)	299, 415
PkrI	GCNGC	7 cut(s)	611, 1033, 1269, 1495, 1522, 1632, 1662
PmaCI	CACGTG	1 cut(s)	1619
PmlI	CACGTG	1 cut(s)	1619
Ppu21I	YACGTR	1 cut(s)	1619
PpuMI	RGGWCCY	1 cut(s)	295
PscI	ACATGT	1 cut(s)	107
PsiI	TTATAA	1 cut(s)	1515
Psp5II	RGGWCCY	1 cut(s)	295
Psp6I	CCWGG	1 cut(s)	880
PspCI	CACGTG	1 cut(s)	1619
PspGI	CCWGG	1 cut(s)	880
PspN4I	GGNNCC	2 cut(s)	150, 297
PspPI	GGNCC	2 cut(s)	295, 301
PspPPI	RGGWCCY	1 cut(s)	295
PsrI	GAACNNNNNNTAC	2 cut(s)	769, 801
PstI	CTGCAG	1 cut(s)	1036
PsuI	RGATCY	1 cut(s)	937
PsyI	GACNNNGTC	2 cut(s)	299, 415
RsaI	GTAC	3 cut(s)	118, 150, 1214
RsaNI	GTAC	3 cut(s)	117, 149, 1213
RseI	CAYNNNNRTG	4 cut(s)	185, 626, 1149, 1580
SaqAI	TTAA	6 cut(s)	38, 350, 554, 585, 1158, 1226
SatI	GCNGC	7 cut(s)	610, 1032, 1268, 1494, 1521, 1631, 1661
Sau3AI	GATC	4 cut(s)	937, 1042, 1081, 1093
Sau96I	GGNCC	2 cut(s)	295, 301
ScrFI	CCNGG	3 cut(s)	299, 321, 882
SduI	GDGCHC	5 cut(s)	981, 1126, 1193, 1386, 1406
SfaNI	GCATC	7 cut(s)	589, 835, 1141, 1182, 1322, 1492, 1514
SfcI	CTRYAG	1 cut(s)	1032
SinI	GGWCC	2 cut(s)	295, 301
SmiMI	CAYNNNNRTG	4 cut(s)	185, 626, 1149, 1580
SmlI	CTYRAG	2 cut(s)	520, 980
SmoI	CTYRAG	2 cut(s)	520, 980
SsiI	CCGC	1 cut(s)	424
SspMI	CTAG	4 cut(s)	48, 836, 1046, 1650
StyD4I	CCNGG	3 cut(s)	297, 319, 880
StyI	CCWWGG	2 cut(s)	269, 1649
TaaI	ACNGT	5 cut(s)	480, 679, 974, 1128, 1709
TaiI	ACGT	2 cut(s)	198, 1621
TaqI	TCGA	4 cut(s)	920, 1141, 1238, 1543
TatI	WGTACW	2 cut(s)	116, 1212
TfiI	GAWTC	2 cut(s)	242, 1486
Tru1I	TTAA	6 cut(s)	38, 350, 554, 585, 1158, 1226
Tru9I	TTAA	6 cut(s)	38, 350, 554, 585, 1158, 1226
TscAI	CASTG	7 cut(s)	160, 483, 979, 1126, 1131, 1339, 1374
TseFI	GTSAC	2 cut(s)	343, 1428
TseI	GCWGC	7 cut(s)	609, 1031, 1267, 1493, 1520, 1630, 1660
Tsp45I	GTSAC	2 cut(s)	343, 1428
TspDTI	ATGAA	4 cut(s)	182, 420, 554, 1085
TspRI	CASTG	7 cut(s)	160, 483, 979, 1126, 1131, 1339, 1374
Tth111I	GACNNNGTC	2 cut(s)	299, 415
VneI	GTGCAC	2 cut(s)	1122, 1402
VpaK11BI	GGWCC	2 cut(s)	295, 301
XapI	RAATTY	1 cut(s)	1015
XceI	RCATGY	2 cut(s)	111, 467
XmaJI	CCTAGG	1 cut(s)	1649
XspI	CTAG	4 cut(s)	48, 836, 1046, 1650
Zsp2I	ATGCAT	2 cut(s)	1009, 1507

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.