Rh2DG290000

ABC transporter F family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0018565
Physical Location & Seq
Forward (+)
33984561 .. 33989438
4878 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG290000.1

Sequence Viewer

Length: 1674 bp
ATGGATTTAGCCTCCAAGCTCCACTGCCTCGACCTCCGCTCCCCCTTCCTCGCCGGCTCCGCCCCCTTCGACGCCCGAACCACCTCTCTCCCTTCTCGCCTCCGCTCCCTCTCGCAACGAATCGCCGCCCAATCCACTAAAGCTAACTCCAACTCCATCAAAACCACTACTTTATTCAAACCCAGAACACCCAGTTCCCAGATACGAACTGGGTTGCCGGCCTTGGCCGTCGAAACTCCGGTGGCCACGGCGGAGGAGAACGACATTGAGTCTTTGTTCTCGGACGATTCCGGGACTGGGAATAATGAACGTAAACGTGGGAAGAAGAATTCGAATTCTGGGGCTTCCGGGATTTCTTCTGGTGTTAAGCTTGAAAATGTGAGGAAGAGCTATAAGGGTGTGACTGTGTTGAAGGATGTGACATGGGAAGTGAAGAAGGGGGAGAAGGTTGGATTGGTGGGGGTGAATGGGGCAGGGAAGACAACCCAGATGAGGATTATTGCTGGTTTGGAAGAACCGGATTCGGGGAATGTGATAAAGGCGAAACCGAATATGAAGATTGCTTTTTTGAGTCAAGAATTCGAGGTTTCGATGAGTAAAACAGTGAGGGAGGAGTTTATGACTGCTTTTAAGGAGGAGATGGAGGTGGCAGAGAGGCTGGAGAAGGTGCAGAAGGCGTTGGAGAGTGCTGTGGAGGATATGGACTTGATGGGGAGGCTTTTGGATGAGCTTGATAAGCTTCAGAATCGGGCGCAGGAGTGTGACTTGAGTATGGTGGATGCGAAGATTAGTAAGTTGATGCCGGAGCTTGGGTTTGCGCCCGAGGATGGGGATAGGCTGGTGGCTTCGTTTAGTAGTGGTTGGCAGATGAGGATGTCACTTGGCAAGATTTTGCTTCAGGACCCTGATTTACTACTGCTGGATGAGCCTACAAATCACCTTGACCTTGACACCATTGAGTGGCTTGAAGATTATCTCAATCAGCAAGATGTGCCAATGGTTATCATATCTCATGACCGAGCTTTTCTCGATCAATTGTGTACAAAAATAGTGGAAACTGATATGGGTGTCTCCAGGACGTATGAGGGAAATTATTCTGAGTATTATATTGCAAAAGCAGCATGGATTGAAAGTCAAAATGCTGCTTGGGAGAAGCAGCAGAAGGAAATTGAGCACACAAAAGATTTGATACATAGGTTGGGCGCTGGAGCAAATTCTGGCCGTGCGTCTTCTGCTGGAAAGGCACGCCTTGCCTTCTGCAAGTTCATGGTAAAGCCATCTACTCTGCTAGTTCTGGATGAACCCACAAATCACTTGGACATTCCTTCAAAAGAGATGCTTGAGGAGGCAATAAATGAGTACAAAGGCACTGTTATCACAGTTTCTCATGACCGATACTTTATAAAGCAAATAGTTAATAGAGTAGTGGAGGTTAAAGACAGAAGACTGCAAGATTATGCAGGCAATTACAATTACTATCTAGAGAAGAATCTAGATGCTAGGGAAAGAGAGCTCGAGCGTGAGGCAGAGATTGAGGAGAAGGCTCCTAAAGTCAAAGCCAAATCAAAGATGTCTAAGGCTGAAAAGGAAGCTCGGAAGAAGCAAAAGATGCAGGCATTCCAGCAAGCAAAGGCAAAATCGAAAGGAATAAAGAACGCTAAGAGATGGAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005215 GO:0008150 GO:0009605 GO:0009607 GO:0009624 GO:0043207 GO:0050896 GO:0051704 GO:0051707
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC_tran ABC_tran_Xtn

Protein Analysis

557

Amino Acids

62.48

Weight (kDa)

7.6

Isoelectric Point (pI)

40.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 137 - 312 1.4e-24 ABC transporter
ABC_tran_Xtn PF12848 351 - 413 2.7e-14 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018565)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr2g0116711
rosa_roxburghii Rroxscaffold_7G00160560
rosa_samantha Rh2AG264700 Rh2BG275600 Rh2BG278400 Rh2DG272000 Rh2DG290000
rosa_wichuraiana Rw2G020750 Rw2G020780 Rw2G020830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1403
AccB7I CCANNNNNTGG 1 cut(s) 960
AccBSI CCGCTC 2 cut(s) 39, 105
AciI CCGC 5 cut(s) 37, 60, 103, 126, 251
AcoI YGGCCR 3 cut(s) 225, 243, 1219
AcsI RAATTY 4 cut(s) 328, 334, 578, 1213
AcuI CTGAAG 2 cut(s) 725, 881
AcyI GRCGYC 1 cut(s) 72
AfaI GTAC 2 cut(s) 1042, 1361
AfiI CCNNNNNNNGG 7 cut(s) 297, 492, 524, 809, 827, 828, 960
AgsI TTSAA 6 cut(s) 178, 374, 412, 968, 1130, 1329
AhdI GACNNNNNGTC 1 cut(s) 268
AjnI CCWGG 1 cut(s) 1073
AjuI GAANNNNNNNTTGG 2 cut(s) 437, 469
Alw21I GWGCWC 2 cut(s) 1176, 1515
Alw26I GTCTC 1 cut(s) 1075
Ama87I CYCGRG 2 cut(s) 821, 1514
AoxI GGCC 4 cut(s) 219, 225, 243, 1219
ApeKI GCWGC 3 cut(s) 1118, 1142, 1156
ApoI RAATTY 4 cut(s) 328, 334, 578, 1213
Asp700I GAANNNNTTC 1 cut(s) 1093
AspLEI GCGC 3 cut(s) 754, 820, 1205
AspS9I GGNCC 1 cut(s) 901
AsuC2I CCSGG 2 cut(s) 292, 349
AsuHPI GGTGA 2 cut(s) 475, 929
AsuII TTCGAA 1 cut(s) 332
AvaI CYCGRG 2 cut(s) 821, 1514
AvaII GGWCC 1 cut(s) 901
BaeI ACNNNNGTAYC 2 cut(s) 1181, 1214
BalI TGGCCA 1 cut(s) 245
BanII GRGCYC 1 cut(s) 1515
BbsI GAAGAC 3 cut(s) 485, 1221, 1450
Bbv12I GWGCWC 2 cut(s) 1176, 1515
BbvI GCAGC 3 cut(s) 1129, 1130, 1168
BccI CCATC 6 cut(s) 164, 634, 703, 821, 1285, 1659
BceAI ACGGC 3 cut(s) 212, 264, 1206
BciT130I CCWGG 1 cut(s) 1075
BcnI CCSGG 2 cut(s) 292, 349
BcoDI GTCTC 1 cut(s) 1075
BfaI CTAG 4 cut(s) 1289, 1481, 1493, 1500
BfoI RGCGCY 1 cut(s) 1206
BisI GCNGC 4 cut(s) 126, 1119, 1143, 1157
BlsI GCNGC 4 cut(s) 127, 1120, 1144, 1158
Bme1390I CCNGG 3 cut(s) 292, 349, 1075
Bme18I GGWCC 1 cut(s) 901
BmeRI GACNNNNNGTC 1 cut(s) 268
BmeT110I CYCGRG 2 cut(s) 821, 1514
BmgT120I GGNCC 1 cut(s) 901
BmiI GGNNCC 3 cut(s) 58, 903, 1545
BmrFI CCNGG 3 cut(s) 292, 349, 1075
BmrI ACTGGG 3 cut(s) 186, 219, 306
BmsI GCATC 5 cut(s) 769, 789, 1326, 1486, 1599
BmuI ACTGGG 3 cut(s) 186, 219, 306
BpiI GAAGAC 3 cut(s) 485, 1221, 1450
BplI GAGNNNNNCTC 2 cut(s) 1011, 1043
BpmI CTGGAG 3 cut(s) 680, 1057, 1227
Bpu14I TTCGAA 1 cut(s) 332
BpuEI CTTGAG 2 cut(s) 787, 1361
BpuMI CCSGG 2 cut(s) 292, 349
BsaHI GRCGYC 1 cut(s) 72
BsaJI CCNNGG 3 cut(s) 222, 246, 822
BsaWI WCCGGW 2 cut(s) 238, 517
BsaXI ACNNNNNCTCC 6 cut(s) 23, 53, 137, 167, 797, 827
Bsc4I CCNNNNNNNGG 7 cut(s) 297, 492, 524, 809, 827, 828, 960
Bse118I RCCGGY 2 cut(s) 53, 217
Bse1I ACTGG 3 cut(s) 192, 214, 301
BseBI CCWGG 1 cut(s) 1075
BseDI CCNNGG 3 cut(s) 222, 246, 822
BseGI GGATG 7 cut(s) 421, 730, 784, 832, 879, 928, 1303
BseLI CCNNNNNNNGG 7 cut(s) 297, 492, 524, 809, 827, 828, 960
BseMII CTCAG 1 cut(s) 1089
BseNI ACTGG 3 cut(s) 192, 214, 301
BseRI GAGGAG 5 cut(s) 269, 626, 650, 1358, 1550
BseXI GCAGC 3 cut(s) 1129, 1130, 1168
BsgI GTGCAG 1 cut(s) 689
BshFI GGCC 4 cut(s) 221, 227, 245, 1221
BsiHKAI GWGCWC 2 cut(s) 1176, 1515
BsiHKCI CYCGRG 2 cut(s) 821, 1514
BsiSI CCGG 7 cut(s) 54, 218, 239, 291, 348, 518, 803
BslFI GGGAC 1 cut(s) 307
BslI CCNNNNNNNGG 7 cut(s) 297, 492, 524, 809, 827, 828, 960
BsmAI GTCTC 1 cut(s) 1075
BsmFI GGGAC 1 cut(s) 307
BsmI GAATGC 1 cut(s) 1616
BsnI GGCC 4 cut(s) 221, 227, 245, 1221
BsoBI CYCGRG 2 cut(s) 821, 1514
Bsp119I TTCGAA 1 cut(s) 332
Bsp1286I GDGCHC 2 cut(s) 1176, 1515
Bsp1407I TGTACA 1 cut(s) 1040
Bsp143I GATC 1 cut(s) 1030
BspACI CCGC 5 cut(s) 37, 60, 103, 126, 251
BspANI GGCC 4 cut(s) 221, 227, 245, 1221
BspCNI CTCAG 1 cut(s) 1090
BspHI TCATGA 2 cut(s) 1012, 1387
BspLI GGNNCC 3 cut(s) 58, 903, 1545
BspQI GCTCTTC 1 cut(s) 380
BspT104I TTCGAA 1 cut(s) 332
BsrBI CCGCTC 2 cut(s) 39, 105
BsrFI RCCGGY 2 cut(s) 53, 217
BsrGI TGTACA 1 cut(s) 1040
BsrI ACTGG 3 cut(s) 192, 214, 301
BssAI RCCGGY 2 cut(s) 53, 217
BssECI CCNNGG 3 cut(s) 222, 246, 822
BssMI GATC 1 cut(s) 1030
BssNI GRCGYC 1 cut(s) 72
BssT1I CCWWGG 1 cut(s) 222
Bst2UI CCWGG 1 cut(s) 1075
Bst4CI ACNGT 4 cut(s) 406, 604, 1372, 1381
Bst6I CTCTTC 1 cut(s) 380
BstACI GRCGYC 1 cut(s) 72
BstAPI GCANNNNNTGC 3 cut(s) 991, 1250, 1609
BstAUI TGTACA 1 cut(s) 1040
BstBI TTCGAA 1 cut(s) 332
BstC8I GCNNGC 6 cut(s) 55, 219, 1246, 1462, 1614, 1626
BstDEI CTNAG 3 cut(s) 1098, 1575, 1659
BstDSI CCRYGG 1 cut(s) 246
BstF5I GGATG 7 cut(s) 421, 730, 784, 832, 879, 928, 1303
BstH2I RGCGCY 1 cut(s) 1206
BstHHI GCGC 3 cut(s) 754, 820, 1205
BstKTI GATC 1 cut(s) 1033
BstMAI GTCTC 1 cut(s) 1075
BstMBI GATC 1 cut(s) 1030
BstMWI GCNNNNNNNGC 9 cut(s) 59, 736, 925, 991, 1118, 1232, 1241, 1250, 1609
BstNI CCWGG 1 cut(s) 1075
BstSCI CCNGG 3 cut(s) 290, 347, 1073
BstV1I GCAGC 3 cut(s) 1129, 1130, 1168
BstV2I GAAGAC 3 cut(s) 485, 1221, 1450
BsuRI GGCC 4 cut(s) 221, 227, 245, 1221
BtgI CCRYGG 1 cut(s) 246
BtsCI GGATG 7 cut(s) 421, 730, 784, 832, 879, 928, 1303
BtsI GCAGTG 1 cut(s) 22
BtsIMutI CAGTG 3 cut(s) 22, 609, 1368
Cac8I GCNNGC 6 cut(s) 55, 219, 1246, 1462, 1614, 1626
CciI TCATGA 2 cut(s) 1012, 1387
CfoI GCGC 3 cut(s) 754, 820, 1205
Cfr10I RCCGGY 2 cut(s) 53, 217
Cfr13I GGNCC 1 cut(s) 901
CseI GACGC 2 cut(s) 80, 1215
Csp6I GTAC 2 cut(s) 1041, 1360
CspCI CAANNNNNGTGG 2 cut(s) 1032, 1067
CviAII CATG 5 cut(s) 423, 1013, 1122, 1267, 1388
CviQI GTAC 2 cut(s) 1041, 1360
DdeI CTNAG 3 cut(s) 1098, 1575, 1659
DpnI GATC 1 cut(s) 1032
DpnII GATC 1 cut(s) 1030
DriI GACNNNNNGTC 1 cut(s) 268
EaeI YGGCCR 3 cut(s) 225, 243, 1219
Eam1104I CTCTTC 1 cut(s) 380
Eam1105I GACNNNNNGTC 1 cut(s) 268
EarI CTCTTC 1 cut(s) 380
EciI GGCGGA 2 cut(s) 49, 266
Ecl136II GAGCTC 1 cut(s) 1513
Eco130I CCWWGG 1 cut(s) 222
Eco24I GRGCYC 1 cut(s) 1515
Eco47I GGWCC 1 cut(s) 901
Eco53kI GAGCTC 1 cut(s) 1513
Eco57I CTGAAG 2 cut(s) 725, 881
Eco88I CYCGRG 2 cut(s) 821, 1514
EcoICRI GAGCTC 1 cut(s) 1513
EcoO109I RGGNCCY 1 cut(s) 901
EcoRI GAATTC 3 cut(s) 328, 334, 578
EcoRII CCWGG 1 cut(s) 1073
EcoT14I CCWWGG 1 cut(s) 222
EcoT38I GRGCYC 1 cut(s) 1515
ErhI CCWWGG 1 cut(s) 222
FaeI CATG 5 cut(s) 426, 1016, 1125, 1270, 1391
FalI AAGNNNNNCTT 2 cut(s) 1323, 1355
FaqI GGGAC 1 cut(s) 307
FatI CATG 5 cut(s) 422, 1012, 1121, 1266, 1387
Fnu4HI GCNGC 4 cut(s) 126, 1119, 1143, 1157
FokI GGATG 7 cut(s) 428, 737, 791, 839, 886, 935, 1310
FriOI GRGCYC 1 cut(s) 1515
Fsp4HI GCNGC 4 cut(s) 126, 1119, 1143, 1157
FspBI CTAG 4 cut(s) 1289, 1481, 1493, 1500
GlaI GCGC 3 cut(s) 753, 819, 1204
GluI GCNGC 4 cut(s) 126, 1119, 1143, 1157
GsuI CTGGAG 3 cut(s) 680, 1057, 1227
HaeII RGCGCY 1 cut(s) 1206
HaeIII GGCC 4 cut(s) 221, 227, 245, 1221
HapII CCGG 7 cut(s) 54, 218, 239, 291, 348, 518, 803
HgaI GACGC 2 cut(s) 80, 1215
HhaI GCGC 3 cut(s) 754, 820, 1205
Hin1I GRCGYC 1 cut(s) 72
Hin1II CATG 5 cut(s) 426, 1016, 1125, 1270, 1391
Hin6I GCGC 3 cut(s) 752, 818, 1203
HinP1I GCGC 3 cut(s) 752, 818, 1203
HindIII AAGCTT 2 cut(s) 368, 737
HinfI GANTC 7 cut(s) 120, 269, 287, 521, 571, 745, 1489
HpaII CCGG 7 cut(s) 54, 218, 239, 291, 348, 518, 803
HphI GGTGA 2 cut(s) 475, 929
Hpy166II GTNNAC 2 cut(s) 314, 1041
Hpy188I TCNGA 4 cut(s) 283, 744, 1099, 1596
Hpy188III TCNNGA 8 cut(s) 575, 899, 1013, 1028, 1295, 1388, 1481, 1493
Hpy8I GTNNAC 2 cut(s) 314, 1041
Hpy99I CGWCG 2 cut(s) 74, 233
HpyCH4III ACNGT 4 cut(s) 406, 604, 1372, 1381
HpyCH4IV ACGT 3 cut(s) 310, 316, 1079
HpyCH4V TGCA 6 cut(s) 670, 1112, 1260, 1450, 1460, 1612
HpyF10VI GCNNNNNNNGC 9 cut(s) 59, 736, 925, 991, 1118, 1232, 1241, 1250, 1609
HpyF3I CTNAG 3 cut(s) 1098, 1575, 1659
HpySE526I ACGT 3 cut(s) 310, 316, 1079
Hsp92I GRCGYC 1 cut(s) 72
Hsp92II CATG 5 cut(s) 426, 1016, 1125, 1270, 1391
HspAI GCGC 3 cut(s) 752, 818, 1203
KroI GCCGGC 2 cut(s) 53, 217
KroNI GCCGGC 2 cut(s) 55, 219
Kzo9I GATC 1 cut(s) 1030
LguI GCTCTTC 1 cut(s) 380
LmnI GCTCC 7 cut(s) 24, 44, 62, 110, 805, 1208, 1549
Lsp1109I GCAGC 3 cut(s) 1129, 1130, 1168
LweI GCATC 5 cut(s) 769, 789, 1326, 1486, 1599
MaeI CTAG 4 cut(s) 1289, 1481, 1493, 1500
MaeII ACGT 3 cut(s) 310, 316, 1079
MaeIII GTNAC 4 cut(s) 400, 418, 761, 876
MalI GATC 1 cut(s) 1032
MbiI CCGCTC 2 cut(s) 39, 105
MboI GATC 1 cut(s) 1030
MfeI CAATTG 1 cut(s) 1034
MhlI GDGCHC 2 cut(s) 1176, 1515
MlsI TGGCCA 1 cut(s) 245
MluNI TGGCCA 1 cut(s) 245
MlyI GAGTC 2 cut(s) 278, 580
MmeI TCCRAC 3 cut(s) 174, 430, 660
Mox20I TGGCCA 1 cut(s) 245
MroNI GCCGGC 2 cut(s) 53, 217
MroXI GAANNNNTTC 1 cut(s) 1093
MscI TGGCCA 1 cut(s) 245
MseI TTAA 5 cut(s) 366, 630, 1416, 1434, 1672
Msp20I TGGCCA 1 cut(s) 245
MspI CCGG 7 cut(s) 54, 218, 239, 291, 348, 518, 803
MspR9I CCNGG 3 cut(s) 292, 349, 1075
MunI CAATTG 1 cut(s) 1034
Mva1269I GAATGC 1 cut(s) 1616
MvaI CCWGG 1 cut(s) 1075
MwoI GCNNNNNNNGC 9 cut(s) 59, 736, 925, 991, 1118, 1232, 1241, 1250, 1609
NaeI GCCGGC 2 cut(s) 55, 219
NciI CCSGG 2 cut(s) 292, 349
NdeII GATC 1 cut(s) 1030
NgoMIV GCCGGC 2 cut(s) 53, 217
NlaIII CATG 5 cut(s) 426, 1016, 1125, 1270, 1391
NlaIV GGNNCC 3 cut(s) 58, 903, 1545
NmuCI GTSAC 4 cut(s) 400, 418, 761, 876
NspV TTCGAA 1 cut(s) 332
PaeR7I CTCGAG 1 cut(s) 1514
PagI TCATGA 2 cut(s) 1012, 1387
PciSI GCTCTTC 1 cut(s) 380
PctI GAATGC 1 cut(s) 1616
PdiI GCCGGC 2 cut(s) 55, 219
PdmI GAANNNNTTC 1 cut(s) 1093
PfeI GAWTC 5 cut(s) 120, 287, 521, 745, 1489
PflMI CCANNNNNTGG 1 cut(s) 960
PfoI TCCNGGA 3 cut(s) 290, 347, 1073
PkrI GCNGC 4 cut(s) 127, 1120, 1144, 1158
PleI GAGTC 2 cut(s) 277, 579
PpsI GAGTC 2 cut(s) 277, 579
PpuMI RGGWCCY 1 cut(s) 901
PsiI TTATAA 1 cut(s) 1403
Psp124BI GAGCTC 1 cut(s) 1515
Psp5II RGGWCCY 1 cut(s) 901
Psp6I CCWGG 1 cut(s) 1073
PspGI CCWGG 1 cut(s) 1073
PspN4I GGNNCC 3 cut(s) 58, 903, 1545
PspPI GGNCC 1 cut(s) 901
PspPPI RGGWCCY 1 cut(s) 901
PspXI VCTCGAGB 1 cut(s) 1514
RsaI GTAC 2 cut(s) 1042, 1361
RsaNI GTAC 2 cut(s) 1041, 1360
SacI GAGCTC 1 cut(s) 1515
SapI GCTCTTC 1 cut(s) 380
SaqAI TTAA 5 cut(s) 366, 630, 1416, 1434, 1672
SatI GCNGC 4 cut(s) 126, 1119, 1143, 1157
Sau3AI GATC 1 cut(s) 1030
Sau96I GGNCC 1 cut(s) 901
SchI GAGTC 2 cut(s) 278, 580
ScrFI CCNGG 3 cut(s) 292, 349, 1075
SduI GDGCHC 2 cut(s) 1176, 1515
SfaNI GCATC 5 cut(s) 769, 789, 1326, 1486, 1599
Sfr274I CTCGAG 1 cut(s) 1514
SfuI TTCGAA 1 cut(s) 332
SinI GGWCC 1 cut(s) 901
SlaI CTCGAG 1 cut(s) 1514
SmlI CTYRAG 3 cut(s) 766, 1340, 1514
SmoI CTYRAG 3 cut(s) 766, 1340, 1514
SsiI CCGC 5 cut(s) 37, 60, 103, 126, 251
SspMI CTAG 4 cut(s) 1289, 1481, 1493, 1500
SstI GAGCTC 1 cut(s) 1515
StyD4I CCNGG 3 cut(s) 290, 347, 1073
StyI CCWWGG 1 cut(s) 222
TaaI ACNGT 4 cut(s) 406, 604, 1372, 1381
TaiI ACGT 3 cut(s) 313, 319, 1082
TaqI TCGA 9 cut(s) 30, 69, 231, 332, 582, 590, 1029, 1515, 1640
TaqII GACCGA 2 cut(s) 1032, 1407
TatI WGTACW 2 cut(s) 1040, 1359
TauI GCSGC 1 cut(s) 128
TfiI GAWTC 5 cut(s) 120, 287, 521, 745, 1489
Tru1I TTAA 5 cut(s) 366, 630, 1416, 1434, 1672
Tru9I TTAA 5 cut(s) 366, 630, 1416, 1434, 1672
TscAI CASTG 3 cut(s) 29, 609, 1375
TseFI GTSAC 4 cut(s) 400, 418, 761, 876
TseI GCWGC 3 cut(s) 1118, 1142, 1156
Tsp45I GTSAC 4 cut(s) 400, 418, 761, 876
TspDTI ATGAA 4 cut(s) 321, 569, 1255, 1314
TspRI CASTG 3 cut(s) 29, 609, 1375
Van91I CCANNNNNTGG 1 cut(s) 960
VpaK11BI GGWCC 1 cut(s) 901
XapI RAATTY 4 cut(s) 328, 334, 578, 1213
XbaI TCTAGA 2 cut(s) 1480, 1492
XcmI CCANNNNNNNNNTGG 2 cut(s) 206, 1312
XhoI CTCGAG 1 cut(s) 1514
XmnI GAANNNNTTC 1 cut(s) 1093
XspI CTAG 4 cut(s) 1289, 1481, 1493, 1500
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.