ABC transporter F family member
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0116711 |
| rosa_roxburghii | Rroxscaffold_7G00160560 |
| rosa_samantha | Rh2AG264700 Rh2BG275600 Rh2BG278400 Rh2DG272000 Rh2DG290000 |
| rosa_wichuraiana | Rw2G020750 Rw2G020780 Rw2G020830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 355 |
| AcsI | RAATTY | 1 cut(s) | 349 |
| AcuI | CTGAAG | 1 cut(s) | 14 |
| AfaI | GTAC | 1 cut(s) | 175 |
| AgsI | TTSAA | 2 cut(s) | 112, 260 |
| AjnI | CCWGG | 1 cut(s) | 206 |
| AluBI | AGCT | 1 cut(s) | 155 |
| AluI | AGCT | 1 cut(s) | 155 |
| Alw21I | GWGCWC | 1 cut(s) | 312 |
| Alw26I | GTCTC | 1 cut(s) | 208 |
| AoxI | GGCC | 1 cut(s) | 355 |
| ApeKI | GCWGC | 3 cut(s) | 49, 248, 292 |
| ApoI | RAATTY | 1 cut(s) | 349 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 349 |
| AspS9I | GGNCC | 1 cut(s) | 34 |
| AvaII | GGWCC | 1 cut(s) | 34 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 317, 350 |
| BbsI | GAAGAC | 1 cut(s) | 357 |
| Bbv12I | GWGCWC | 1 cut(s) | 312 |
| BbvI | GCAGC | 3 cut(s) | 36, 260, 304 |
| BccI | CCATC | 2 cut(s) | 277, 335 |
| BceAI | ACGGC | 1 cut(s) | 342 |
| BciT130I | CCWGG | 1 cut(s) | 208 |
| BcoDI | GTCTC | 1 cut(s) | 208 |
| BisI | GCNGC | 3 cut(s) | 50, 249, 293 |
| BlsI | GCNGC | 3 cut(s) | 51, 250, 294 |
| Bme1390I | CCNGG | 1 cut(s) | 208 |
| Bme18I | GGWCC | 1 cut(s) | 34 |
| BmgT120I | GGNCC | 1 cut(s) | 34 |
| BmiI | GGNNCC | 1 cut(s) | 36 |
| BmrFI | CCNGG | 1 cut(s) | 208 |
| BpiI | GAAGAC | 1 cut(s) | 357 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 144, 176 |
| BpmI | CTGGAG | 1 cut(s) | 190 |
| BseBI | CCWGG | 1 cut(s) | 208 |
| BseGI | GGATG | 1 cut(s) | 12 |
| BseXI | GCAGC | 3 cut(s) | 36, 260, 304 |
| BshFI | GGCC | 1 cut(s) | 357 |
| BsiHKAI | GWGCWC | 1 cut(s) | 312 |
| BsmAI | GTCTC | 1 cut(s) | 208 |
| BsnI | GGCC | 1 cut(s) | 357 |
| Bsp1286I | GDGCHC | 1 cut(s) | 312 |
| Bsp1407I | TGTACA | 1 cut(s) | 173 |
| Bsp143I | GATC | 1 cut(s) | 163 |
| BspANI | GGCC | 1 cut(s) | 357 |
| BspHI | TCATGA | 1 cut(s) | 145 |
| BspLI | GGNNCC | 1 cut(s) | 36 |
| BsrGI | TGTACA | 1 cut(s) | 173 |
| BssMI | GATC | 1 cut(s) | 163 |
| Bst2UI | CCWGG | 1 cut(s) | 208 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 124 |
| BstAUI | TGTACA | 1 cut(s) | 173 |
| BstC8I | GCNNGC | 1 cut(s) | 120 |
| BstF5I | GGATG | 1 cut(s) | 12 |
| BstKTI | GATC | 1 cut(s) | 166 |
| BstMAI | GTCTC | 1 cut(s) | 208 |
| BstMBI | GATC | 1 cut(s) | 163 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 58, 124, 248, 368 |
| BstNI | CCWGG | 1 cut(s) | 208 |
| BstSCI | CCNGG | 1 cut(s) | 206 |
| BstV1I | GCAGC | 3 cut(s) | 36, 260, 304 |
| BstV2I | GAAGAC | 1 cut(s) | 357 |
| BsuRI | GGCC | 1 cut(s) | 357 |
| BtgZI | GCGATG | 1 cut(s) | 354 |
| BtsCI | GGATG | 1 cut(s) | 12 |
| Cac8I | GCNNGC | 1 cut(s) | 120 |
| CciI | TCATGA | 1 cut(s) | 145 |
| Cfr13I | GGNCC | 1 cut(s) | 34 |
| CseI | GACGC | 1 cut(s) | 351 |
| Csp6I | GTAC | 1 cut(s) | 174 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 165, 200 |
| CviAII | CATG | 2 cut(s) | 146, 252 |
| CviJI | RGCY | 5 cut(s) | 61, 97, 122, 155, 357 |
| CviKI_1 | RGCY | 5 cut(s) | 61, 97, 122, 155, 357 |
| CviQI | GTAC | 1 cut(s) | 174 |
| DpnI | GATC | 1 cut(s) | 165 |
| DpnII | GATC | 1 cut(s) | 163 |
| EaeI | YGGCCR | 1 cut(s) | 355 |
| Eco47I | GGWCC | 1 cut(s) | 34 |
| Eco57I | CTGAAG | 1 cut(s) | 14 |
| EcoO109I | RGGNCCY | 1 cut(s) | 34 |
| EcoRII | CCWGG | 1 cut(s) | 206 |
| FaeI | CATG | 2 cut(s) | 149, 255 |
| FaiI | YATR | 7 cut(s) | 86, 140, 147, 197, 216, 236, 253 |
| FatI | CATG | 2 cut(s) | 145, 251 |
| Fnu4HI | GCNGC | 3 cut(s) | 50, 249, 293 |
| FokI | GGATG | 1 cut(s) | 19 |
| Fsp4HI | GCNGC | 3 cut(s) | 50, 249, 293 |
| GluI | GCNGC | 3 cut(s) | 50, 249, 293 |
| GsuI | CTGGAG | 1 cut(s) | 190 |
| HaeIII | GGCC | 1 cut(s) | 357 |
| HgaI | GACGC | 1 cut(s) | 351 |
| Hin1II | CATG | 2 cut(s) | 149, 255 |
| Hpy188III | TCNNGA | 3 cut(s) | 32, 146, 161 |
| HpyAV | CCTTC | 1 cut(s) | 292 |
| HpyCH4IV | ACGT | 1 cut(s) | 212 |
| HpyCH4V | TGCA | 2 cut(s) | 242, 371 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 58, 124, 248, 368 |
| HpySE526I | ACGT | 1 cut(s) | 212 |
| Hsp92II | CATG | 2 cut(s) | 149, 255 |
| Kzo9I | GATC | 1 cut(s) | 163 |
| LpnPI | CCDG | 8 cut(s) | 17, 38, 51, 104, 193, 220, 316, 339 |
| Lsp1109I | GCAGC | 3 cut(s) | 36, 260, 304 |
| MaeII | ACGT | 1 cut(s) | 212 |
| MaeIII | GTNAC | 1 cut(s) | 9 |
| MalI | GATC | 1 cut(s) | 165 |
| MboI | GATC | 1 cut(s) | 163 |
| MboII | GAAGA | 3 cut(s) | 31, 113, 357 |
| MhlI | GDGCHC | 1 cut(s) | 312 |
| MluCI | AATT | 5 cut(s) | 67, 167, 223, 349, 373 |
| MnlI | CCTC | 1 cut(s) | 211 |
| MroXI | GAANNNNTTC | 1 cut(s) | 349 |
| MspR9I | CCNGG | 1 cut(s) | 208 |
| MvaI | CCWGG | 1 cut(s) | 208 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 58, 124, 248, 368 |
| NdeII | GATC | 1 cut(s) | 163 |
| NlaIII | CATG | 2 cut(s) | 149, 255 |
| NlaIV | GGNNCC | 1 cut(s) | 36 |
| NmuCI | GTSAC | 1 cut(s) | 9 |
| PagI | TCATGA | 1 cut(s) | 145 |
| PdmI | GAANNNNTTC | 1 cut(s) | 349 |
| PfoI | TCCNGGA | 1 cut(s) | 206 |
| PkrI | GCNGC | 3 cut(s) | 51, 250, 294 |
| PpuMI | RGGWCCY | 1 cut(s) | 34 |
| Psp5II | RGGWCCY | 1 cut(s) | 34 |
| Psp6I | CCWGG | 1 cut(s) | 206 |
| PspGI | CCWGG | 1 cut(s) | 206 |
| PspN4I | GGNNCC | 1 cut(s) | 36 |
| PspPI | GGNCC | 1 cut(s) | 34 |
| PspPPI | RGGWCCY | 1 cut(s) | 34 |
| RsaI | GTAC | 1 cut(s) | 175 |
| RsaNI | GTAC | 1 cut(s) | 174 |
| SatI | GCNGC | 3 cut(s) | 50, 249, 293 |
| Sau3AI | GATC | 1 cut(s) | 163 |
| Sau96I | GGNCC | 1 cut(s) | 34 |
| ScrFI | CCNGG | 1 cut(s) | 208 |
| SduI | GDGCHC | 1 cut(s) | 312 |
| SetI | ASST | 5 cut(s) | 75, 81, 157, 215, 335 |
| SinI | GGWCC | 1 cut(s) | 34 |
| Sse9I | AATT | 5 cut(s) | 67, 167, 223, 349, 373 |
| StyD4I | CCNGG | 1 cut(s) | 206 |
| TaiI | ACGT | 1 cut(s) | 215 |
| TaqI | TCGA | 2 cut(s) | 99, 162 |
| TaqII | GACCGA | 1 cut(s) | 165 |
| TasI | AATT | 5 cut(s) | 67, 167, 223, 349, 373 |
| TatI | WGTACW | 1 cut(s) | 173 |
| TseFI | GTSAC | 1 cut(s) | 9 |
| TseI | GCWGC | 3 cut(s) | 49, 248, 292 |
| Tsp45I | GTSAC | 1 cut(s) | 9 |
| VpaK11BI | GGWCC | 1 cut(s) | 34 |
| XapI | RAATTY | 1 cut(s) | 349 |
| XmnI | GAANNNNTTC | 1 cut(s) | 349 |