Domain of unknown function (DUF4220)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD10G1305500.v1.1 |
| prunus_persica | Prupe.4G034200_v2.0.a1 |
| pyrus_communis | pycom10g25790 |
| rosa_chinensis | RchiOBHm_Chr3g0476871 |
| rosa_laevigata | RLG00000023747 |
| rosa_multiflora | Rmu_sc0000288.1_g000035 |
| rosa_roxburghii | Rroxscaffold_6G00404500 |
| rosa_rugosa | Rorug03G0157400 |
| rosa_samantha | Rh3AG207500 Rh3BG240100 Rh3CG233800 Rh3CG234900 Rh3DG233800 |
| rosa_wichuraiana | Rw0G011130 Rw3G018890 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 638 |
| AccI | GTMKAC | 2 cut(s) | 1278, 1981 |
| AciI | CCGC | 4 cut(s) | 55, 291, 922, 1469 |
| AclWI | GGATC | 2 cut(s) | 650, 1171 |
| AcoI | YGGCCR | 1 cut(s) | 537 |
| AcsI | RAATTY | 4 cut(s) | 1254, 1420, 1800, 1820 |
| AcuI | CTGAAG | 1 cut(s) | 1312 |
| AfaI | GTAC | 4 cut(s) | 848, 914, 1319, 1992 |
| AfeI | AGCGCT | 1 cut(s) | 829 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 511, 539, 638, 1702, 1703, 1945, 2012 |
| AflII | CTTAAG | 2 cut(s) | 70, 1895 |
| AflIII | ACRYGT | 1 cut(s) | 42 |
| AgsI | TTSAA | 6 cut(s) | 368, 579, 593, 745, 977, 1099 |
| AjiI | CACGTC | 1 cut(s) | 43 |
| AjnI | CCWGG | 3 cut(s) | 1041, 1197, 1725 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 317, 348, 349, 380 |
| Alw21I | GWGCWC | 4 cut(s) | 484, 855, 1314, 1540 |
| Alw26I | GTCTC | 2 cut(s) | 80, 509 |
| AlwI | GGATC | 2 cut(s) | 650, 1171 |
| Aor51HI | AGCGCT | 1 cut(s) | 829 |
| AoxI | GGCC | 5 cut(s) | 292, 537, 629, 1692, 1743 |
| ApeKI | GCWGC | 9 cut(s) | 182, 377, 380, 712, 1130, 1333, 1414, 1678, 1832 |
| ApoI | RAATTY | 4 cut(s) | 1254, 1420, 1800, 1820 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1476 |
| AspLEI | GCGC | 1 cut(s) | 830 |
| AspS9I | GGNCC | 4 cut(s) | 293, 542, 1083, 1693 |
| AsuC2I | CCSGG | 1 cut(s) | 1940 |
| AsuHPI | GGTGA | 5 cut(s) | 37, 196, 1294, 1412, 1684 |
| AvaII | GGWCC | 2 cut(s) | 542, 1083 |
| BanII | GRGCYC | 3 cut(s) | 855, 1314, 1411 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1310, 1342 |
| Bbv12I | GWGCWC | 4 cut(s) | 484, 855, 1314, 1540 |
| BbvCI | CCTCAGC | 1 cut(s) | 1337 |
| BbvI | GCAGC | 9 cut(s) | 169, 367, 389, 699, 1117, 1345, 1401, 1690, 1819 |
| BccI | CCATC | 3 cut(s) | 291, 1367, 1684 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 161, 195 |
| BciT130I | CCWGG | 3 cut(s) | 1043, 1199, 1727 |
| BciVI | GTATCC | 1 cut(s) | 1180 |
| BcnI | CCSGG | 1 cut(s) | 1940 |
| BcoDI | GTCTC | 2 cut(s) | 80, 509 |
| BfaI | CTAG | 3 cut(s) | 437, 825, 1623 |
| BfmI | CTRYAG | 1 cut(s) | 561 |
| BfoI | RGCGCY | 1 cut(s) | 831 |
| BfrI | CTTAAG | 2 cut(s) | 70, 1895 |
| BfuI | GTATCC | 1 cut(s) | 1180 |
| BglII | AGATCT | 1 cut(s) | 247 |
| BlpI | GCTNAGC | 2 cut(s) | 854, 1998 |
| BmcAI | AGTACT | 1 cut(s) | 1319 |
| Bme1390I | CCNGG | 4 cut(s) | 1043, 1199, 1727, 1940 |
| Bme18I | GGWCC | 2 cut(s) | 542, 1083 |
| BmgBI | CACGTC | 1 cut(s) | 43 |
| BmgT120I | GGNCC | 4 cut(s) | 293, 542, 1083, 1693 |
| BmiI | GGNNCC | 4 cut(s) | 426, 1033, 1085, 1695 |
| BmrFI | CCNGG | 4 cut(s) | 1043, 1199, 1727, 1940 |
| BmrI | ACTGGG | 2 cut(s) | 1414, 1691 |
| BmsI | GCATC | 5 cut(s) | 113, 634, 1665, 1690, 1861 |
| BmuI | ACTGGG | 2 cut(s) | 1414, 1691 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1337 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 854, 1998 |
| BpuEI | CTTGAG | 2 cut(s) | 341, 1298 |
| BpuMI | CCSGG | 1 cut(s) | 1940 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1168 |
| BsaJI | CCNNGG | 3 cut(s) | 882, 954, 1922 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 511, 539, 638, 1702, 1703, 1945, 2012 |
| Bse118I | RCCGGY | 2 cut(s) | 532, 1232 |
| Bse1I | ACTGG | 3 cut(s) | 1085, 1409, 1697 |
| Bse3DI | GCAATG | 3 cut(s) | 1089, 1491, 1538 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1168 |
| BseBI | CCWGG | 3 cut(s) | 1043, 1199, 1727 |
| BseDI | CCNNGG | 3 cut(s) | 882, 954, 1922 |
| BseGI | GGATG | 5 cut(s) | 649, 1207, 1286, 1378, 1681 |
| BseJI | GATNNNNATC | 1 cut(s) | 1168 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 511, 539, 638, 1702, 1703, 1945, 2012 |
| BseMI | GCAATG | 3 cut(s) | 1089, 1491, 1538 |
| BseMII | CTCAG | 6 cut(s) | 782, 784, 868, 1305, 1328, 2012 |
| BseNI | ACTGG | 3 cut(s) | 1085, 1409, 1697 |
| BseXI | GCAGC | 9 cut(s) | 169, 367, 389, 699, 1117, 1345, 1401, 1690, 1819 |
| BsgI | GTGCAG | 1 cut(s) | 1758 |
| BshFI | GGCC | 5 cut(s) | 294, 539, 631, 1694, 1745 |
| BsiHKAI | GWGCWC | 4 cut(s) | 484, 855, 1314, 1540 |
| BsiSI | CCGG | 4 cut(s) | 533, 540, 1233, 1939 |
| BslFI | GGGAC | 2 cut(s) | 53, 581 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 511, 539, 638, 1702, 1703, 1945, 2012 |
| BsmAI | GTCTC | 2 cut(s) | 80, 509 |
| BsmFI | GGGAC | 2 cut(s) | 53, 581 |
| BsmI | GAATGC | 2 cut(s) | 257, 1765 |
| BsnI | GGCC | 5 cut(s) | 294, 539, 631, 1694, 1745 |
| Bsp1286I | GDGCHC | 5 cut(s) | 484, 855, 1314, 1411, 1540 |
| Bsp1407I | TGTACA | 1 cut(s) | 1990 |
| Bsp143I | GATC | 7 cut(s) | 247, 655, 1006, 1163, 1777, 1826, 1912 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 854, 1998 |
| Bsp19I | CCATGG | 1 cut(s) | 1922 |
| BspACI | CCGC | 4 cut(s) | 55, 291, 922, 1469 |
| BspANI | GGCC | 5 cut(s) | 294, 539, 631, 1694, 1745 |
| BspCNI | CTCAG | 6 cut(s) | 783, 783, 867, 1304, 1329, 2011 |
| BspHI | TCATGA | 1 cut(s) | 1915 |
| BspLI | GGNNCC | 4 cut(s) | 426, 1033, 1085, 1695 |
| BspPI | GGATC | 2 cut(s) | 650, 1171 |
| BspQI | GCTCTTC | 1 cut(s) | 1302 |
| BspTI | CTTAAG | 2 cut(s) | 70, 1895 |
| BsrDI | GCAATG | 3 cut(s) | 1089, 1491, 1538 |
| BsrFI | RCCGGY | 2 cut(s) | 532, 1232 |
| BsrGI | TGTACA | 1 cut(s) | 1990 |
| BsrI | ACTGG | 3 cut(s) | 1085, 1409, 1697 |
| BssAI | RCCGGY | 2 cut(s) | 532, 1232 |
| BssECI | CCNNGG | 3 cut(s) | 882, 954, 1922 |
| BssMI | GATC | 7 cut(s) | 247, 655, 1006, 1163, 1777, 1826, 1912 |
| BssT1I | CCWWGG | 3 cut(s) | 882, 954, 1922 |
| Bst2UI | CCWGG | 3 cut(s) | 1043, 1199, 1727 |
| Bst4CI | ACNGT | 4 cut(s) | 433, 520, 562, 670 |
| Bst6I | CTCTTC | 1 cut(s) | 1302 |
| BstAFI | CTTAAG | 2 cut(s) | 70, 1895 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 712 |
| BstAUI | TGTACA | 1 cut(s) | 1990 |
| BstC8I | GCNNGC | 3 cut(s) | 168, 1763, 1884 |
| BstDEI | CTNAG | 8 cut(s) | 770, 791, 854, 925, 993, 1291, 1337, 1998 |
| BstDSI | CCRYGG | 1 cut(s) | 1922 |
| BstF5I | GGATG | 5 cut(s) | 649, 1207, 1286, 1378, 1681 |
| BstH2I | RGCGCY | 1 cut(s) | 831 |
| BstHHI | GCGC | 1 cut(s) | 830 |
| BstKTI | GATC | 7 cut(s) | 250, 658, 1009, 1166, 1780, 1829, 1915 |
| BstMAI | GTCTC | 2 cut(s) | 80, 509 |
| BstMBI | GATC | 7 cut(s) | 247, 655, 1006, 1163, 1777, 1826, 1912 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 188, 263, 712, 930 |
| BstNI | CCWGG | 3 cut(s) | 1043, 1199, 1727 |
| BstNSI | RCATGY | 4 cut(s) | 706, 1389, 1878, 1997 |
| BstSCI | CCNGG | 4 cut(s) | 1041, 1197, 1725, 1938 |
| BstSFI | CTRYAG | 1 cut(s) | 561 |
| BstV1I | GCAGC | 9 cut(s) | 169, 367, 389, 699, 1117, 1345, 1401, 1690, 1819 |
| BstX2I | RGATCY | 2 cut(s) | 247, 655 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1042 |
| BstYI | RGATCY | 2 cut(s) | 247, 655 |
| BsuI | GTATCC | 1 cut(s) | 1180 |
| BsuRI | GGCC | 5 cut(s) | 294, 539, 631, 1694, 1745 |
| BtgI | CCRYGG | 1 cut(s) | 1922 |
| BtrI | CACGTC | 1 cut(s) | 43 |
| BtsCI | GGATG | 5 cut(s) | 649, 1207, 1286, 1378, 1681 |
| Cac8I | GCNNGC | 3 cut(s) | 168, 1763, 1884 |
| CciI | TCATGA | 1 cut(s) | 1915 |
| CfoI | GCGC | 1 cut(s) | 830 |
| Cfr10I | RCCGGY | 2 cut(s) | 532, 1232 |
| Cfr13I | GGNCC | 4 cut(s) | 293, 542, 1083, 1693 |
| CseI | GACGC | 2 cut(s) | 887, 1196 |
| Csp6I | GTAC | 4 cut(s) | 847, 913, 1318, 1991 |
| CspCI | CAANNNNNGTGG | 3 cut(s) | 516, 551, 2091 |
| CviAII | CATG | 9 cut(s) | 633, 703, 862, 1386, 1511, 1875, 1916, 1923, 1994 |
| CviQI | GTAC | 4 cut(s) | 847, 913, 1318, 1991 |
| DdeI | CTNAG | 8 cut(s) | 770, 791, 854, 925, 993, 1291, 1337, 1998 |
| DpnI | GATC | 7 cut(s) | 249, 657, 1008, 1165, 1779, 1828, 1914 |
| DpnII | GATC | 7 cut(s) | 247, 655, 1006, 1163, 1777, 1826, 1912 |
| DraI | TTTAAA | 2 cut(s) | 696, 1425 |
| EaeI | YGGCCR | 1 cut(s) | 537 |
| Eam1104I | CTCTTC | 1 cut(s) | 1302 |
| EarI | CTCTTC | 1 cut(s) | 1302 |
| Ecl136II | GAGCTC | 2 cut(s) | 853, 1312 |
| Eco130I | CCWWGG | 3 cut(s) | 882, 954, 1922 |
| Eco24I | GRGCYC | 3 cut(s) | 855, 1314, 1411 |
| Eco47I | GGWCC | 2 cut(s) | 542, 1083 |
| Eco47III | AGCGCT | 1 cut(s) | 829 |
| Eco53kI | GAGCTC | 2 cut(s) | 853, 1312 |
| Eco57I | CTGAAG | 1 cut(s) | 1312 |
| EcoICRI | GAGCTC | 2 cut(s) | 853, 1312 |
| EcoRI | GAATTC | 1 cut(s) | 1254 |
| EcoRII | CCWGG | 3 cut(s) | 1041, 1197, 1725 |
| EcoT14I | CCWWGG | 3 cut(s) | 882, 954, 1922 |
| EcoT22I | ATGCAT | 1 cut(s) | 1876 |
| EcoT38I | GRGCYC | 3 cut(s) | 855, 1314, 1411 |
| ErhI | CCWWGG | 3 cut(s) | 882, 954, 1922 |
| FaeI | CATG | 9 cut(s) | 636, 706, 865, 1389, 1514, 1878, 1919, 1926, 1997 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1739, 1771 |
| FaqI | GGGAC | 2 cut(s) | 53, 581 |
| FatI | CATG | 9 cut(s) | 632, 702, 861, 1385, 1510, 1874, 1915, 1922, 1993 |
| FauI | CCCGC | 1 cut(s) | 48 |
| FauNDI | CATATG | 1 cut(s) | 1963 |
| FblI | GTMKAC | 2 cut(s) | 1278, 1981 |
| FokI | GGATG | 5 cut(s) | 656, 1214, 1273, 1385, 1668 |
| FriOI | GRGCYC | 3 cut(s) | 855, 1314, 1411 |
| FspBI | CTAG | 3 cut(s) | 437, 825, 1623 |
| GlaI | GCGC | 1 cut(s) | 829 |
| HaeII | RGCGCY | 1 cut(s) | 831 |
| HaeIII | GGCC | 5 cut(s) | 294, 539, 631, 1694, 1745 |
| HapII | CCGG | 4 cut(s) | 533, 540, 1233, 1939 |
| HgaI | GACGC | 2 cut(s) | 887, 1196 |
| HhaI | GCGC | 1 cut(s) | 830 |
| Hin1II | CATG | 9 cut(s) | 636, 706, 865, 1389, 1514, 1878, 1919, 1926, 1997 |
| Hin6I | GCGC | 1 cut(s) | 828 |
| HinP1I | GCGC | 1 cut(s) | 828 |
| HincII | GTYRAC | 1 cut(s) | 220 |
| HindII | GTYRAC | 1 cut(s) | 220 |
| HindIII | AAGCTT | 1 cut(s) | 931 |
| HinfI | GANTC | 8 cut(s) | 49, 144, 689, 750, 793, 986, 1752, 2050 |
| HpaII | CCGG | 4 cut(s) | 533, 540, 1233, 1939 |
| HphI | GGTGA | 5 cut(s) | 37, 196, 1294, 1412, 1684 |
| Hpy166II | GTNNAC | 7 cut(s) | 220, 666, 915, 1279, 1391, 1553, 1982 |
| Hpy188I | TCNGA | 9 cut(s) | 114, 234, 429, 1078, 1294, 1353, 1434, 1651, 1826 |
| Hpy188III | TCNNGA | 5 cut(s) | 320, 797, 1161, 1211, 1916 |
| Hpy8I | GTNNAC | 7 cut(s) | 220, 666, 915, 1279, 1391, 1553, 1982 |
| Hpy99I | CGWCG | 2 cut(s) | 433, 903 |
| HpyAV | CCTTC | 6 cut(s) | 229, 776, 1105, 1146, 1362, 1834 |
| HpyCH4III | ACNGT | 4 cut(s) | 433, 520, 562, 670 |
| HpyCH4IV | ACGT | 1 cut(s) | 42 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 188, 263, 712, 930 |
| HpyF3I | CTNAG | 8 cut(s) | 770, 791, 854, 925, 993, 1291, 1337, 1998 |
| HpySE526I | ACGT | 1 cut(s) | 42 |
| Hsp92II | CATG | 9 cut(s) | 636, 706, 865, 1389, 1514, 1878, 1919, 1926, 1997 |
| HspAI | GCGC | 1 cut(s) | 828 |
| Kzo9I | GATC | 7 cut(s) | 247, 655, 1006, 1163, 1777, 1826, 1912 |
| LguI | GCTCTTC | 1 cut(s) | 1302 |
| LmnI | GCTCC | 5 cut(s) | 4, 779, 1031, 1116, 1446 |
| Lsp1109I | GCAGC | 9 cut(s) | 169, 367, 389, 699, 1117, 1345, 1401, 1690, 1819 |
| LweI | GCATC | 5 cut(s) | 113, 634, 1665, 1690, 1861 |
| MaeI | CTAG | 3 cut(s) | 437, 825, 1623 |
| MaeII | ACGT | 1 cut(s) | 42 |
| MaeIII | GTNAC | 4 cut(s) | 1300, 1400, 1580, 1616 |
| MalI | GATC | 7 cut(s) | 249, 657, 1008, 1165, 1779, 1828, 1914 |
| MboI | GATC | 7 cut(s) | 247, 655, 1006, 1163, 1777, 1826, 1912 |
| MfeI | CAATTG | 1 cut(s) | 707 |
| MflI | RGATCY | 2 cut(s) | 247, 655 |
| MhlI | GDGCHC | 5 cut(s) | 484, 855, 1314, 1411, 1540 |
| MlyI | GAGTC | 4 cut(s) | 138, 744, 802, 995 |
| MmeI | TCCRAC | 4 cut(s) | 334, 430, 452, 1884 |
| Mph1103I | ATGCAT | 1 cut(s) | 1876 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1476 |
| MseI | TTAA | 7 cut(s) | 71, 695, 810, 1343, 1424, 1896, 1974 |
| MslI | CAYNNNNRTG | 2 cut(s) | 578, 1545 |
| MspA1I | CMGCKG | 2 cut(s) | 380, 1336 |
| MspCI | CTTAAG | 2 cut(s) | 70, 1895 |
| MspI | CCGG | 4 cut(s) | 533, 540, 1233, 1939 |
| MspR9I | CCNGG | 4 cut(s) | 1043, 1199, 1727, 1940 |
| MunI | CAATTG | 1 cut(s) | 707 |
| Mva1269I | GAATGC | 2 cut(s) | 257, 1765 |
| MvaI | CCWGG | 3 cut(s) | 1043, 1199, 1727 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 188, 263, 712, 930 |
| NciI | CCSGG | 1 cut(s) | 1940 |
| NcoI | CCATGG | 1 cut(s) | 1922 |
| NdeI | CATATG | 1 cut(s) | 1963 |
| NdeII | GATC | 7 cut(s) | 247, 655, 1006, 1163, 1777, 1826, 1912 |
| NlaIII | CATG | 9 cut(s) | 636, 706, 865, 1389, 1514, 1878, 1919, 1926, 1997 |
| NlaIV | GGNNCC | 4 cut(s) | 426, 1033, 1085, 1695 |
| NmuCI | GTSAC | 3 cut(s) | 1300, 1400, 1580 |
| NsiI | ATGCAT | 1 cut(s) | 1876 |
| NspI | RCATGY | 4 cut(s) | 706, 1389, 1878, 1997 |
| PagI | TCATGA | 1 cut(s) | 1915 |
| PciSI | GCTCTTC | 1 cut(s) | 1302 |
| PctI | GAATGC | 2 cut(s) | 257, 1765 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1476 |
| PfeI | GAWTC | 4 cut(s) | 49, 689, 1752, 2050 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 638 |
| PfoI | TCCNGGA | 2 cut(s) | 1041, 1725 |
| PleI | GAGTC | 4 cut(s) | 138, 744, 801, 994 |
| PpsI | GAGTC | 4 cut(s) | 138, 744, 801, 994 |
| Psp124BI | GAGCTC | 2 cut(s) | 855, 1314 |
| Psp6I | CCWGG | 3 cut(s) | 1041, 1197, 1725 |
| PspGI | CCWGG | 3 cut(s) | 1041, 1197, 1725 |
| PspN4I | GGNNCC | 4 cut(s) | 426, 1033, 1085, 1695 |
| PspPI | GGNCC | 4 cut(s) | 293, 542, 1083, 1693 |
| PsuI | RGATCY | 2 cut(s) | 247, 655 |
| PvuII | CAGCTG | 2 cut(s) | 380, 1336 |
| RsaI | GTAC | 4 cut(s) | 848, 914, 1319, 1992 |
| RsaNI | GTAC | 4 cut(s) | 847, 913, 1318, 1991 |
| RseI | CAYNNNNRTG | 2 cut(s) | 578, 1545 |
| SacI | GAGCTC | 2 cut(s) | 855, 1314 |
| SapI | GCTCTTC | 1 cut(s) | 1302 |
| SaqAI | TTAA | 7 cut(s) | 71, 695, 810, 1343, 1424, 1896, 1974 |
| Sau3AI | GATC | 7 cut(s) | 247, 655, 1006, 1163, 1777, 1826, 1912 |
| Sau96I | GGNCC | 4 cut(s) | 293, 542, 1083, 1693 |
| ScaI | AGTACT | 1 cut(s) | 1319 |
| SchI | GAGTC | 4 cut(s) | 138, 744, 802, 995 |
| ScrFI | CCNGG | 4 cut(s) | 1043, 1199, 1727, 1940 |
| SduI | GDGCHC | 5 cut(s) | 484, 855, 1314, 1411, 1540 |
| SfaNI | GCATC | 5 cut(s) | 113, 634, 1665, 1690, 1861 |
| SfcI | CTRYAG | 1 cut(s) | 561 |
| SinI | GGWCC | 2 cut(s) | 542, 1083 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 578, 1545 |
| SmlI | CTYRAG | 4 cut(s) | 70, 320, 1313, 1895 |
| SmoI | CTYRAG | 4 cut(s) | 70, 320, 1313, 1895 |
| SsiI | CCGC | 4 cut(s) | 55, 291, 922, 1469 |
| SspMI | CTAG | 3 cut(s) | 437, 825, 1623 |
| SstI | GAGCTC | 2 cut(s) | 855, 1314 |
| StyD4I | CCNGG | 4 cut(s) | 1041, 1197, 1725, 1938 |
| StyI | CCWWGG | 3 cut(s) | 882, 954, 1922 |
| TaaI | ACNGT | 4 cut(s) | 433, 520, 562, 670 |
| TaiI | ACGT | 1 cut(s) | 45 |
| TaqI | TCGA | 2 cut(s) | 796, 1522 |
| TaqII | GACCGA | 2 cut(s) | 798, 1999 |
| TatI | WGTACW | 2 cut(s) | 1317, 1990 |
| TauI | GCSGC | 1 cut(s) | 294 |
| TfiI | GAWTC | 4 cut(s) | 49, 689, 1752, 2050 |
| Tru1I | TTAA | 7 cut(s) | 71, 695, 810, 1343, 1424, 1896, 1974 |
| Tru9I | TTAA | 7 cut(s) | 71, 695, 810, 1343, 1424, 1896, 1974 |
| TseFI | GTSAC | 3 cut(s) | 1300, 1400, 1580 |
| TseI | GCWGC | 9 cut(s) | 182, 377, 380, 712, 1130, 1333, 1414, 1678, 1832 |
| Tsp45I | GTSAC | 3 cut(s) | 1300, 1400, 1580 |
| TspDTI | ATGAA | 7 cut(s) | 398, 567, 850, 1157, 1275, 1602, 2063 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 638 |
| Vha464I | CTTAAG | 2 cut(s) | 70, 1895 |
| VpaK11BI | GGWCC | 2 cut(s) | 542, 1083 |
| XapI | RAATTY | 4 cut(s) | 1254, 1420, 1800, 1820 |
| XceI | RCATGY | 4 cut(s) | 706, 1389, 1878, 1997 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 889, 952 |
| XmiI | GTMKAC | 2 cut(s) | 1278, 1981 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1476 |
| XspI | CTAG | 3 cut(s) | 437, 825, 1623 |
| ZrmI | AGTACT | 1 cut(s) | 1319 |
| Zsp2I | ATGCAT | 1 cut(s) | 1876 |