pentatricopeptide repeat-containing protein At5g06400
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G57062 AT3G57062 |
| prunus_persica | Prupe.7G043000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr3g0476891 RchiOBHm_Chr3g0476991 RchiOBHm_Chr3g0477841 |
| rosa_multiflora | Rmu_sc0000288.1_g000021 Rmu_sc0000288.1_g000032 |
| rosa_roxburghii | Rroxscaffold_6G00403670 Rroxscaffold_6G00404410 Rroxscaffold_6G00404890 |
| rosa_rugosa | Rorug03G0158100 |
| rosa_samantha | Rh3BG241100 Rh3DG234400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 419 |
| AclWI | GGATC | 1 cut(s) | 181 |
| AcsI | RAATTY | 1 cut(s) | 77 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 36, 240, 270, 271 |
| AflIII | ACRYGT | 1 cut(s) | 214 |
| AgsI | TTSAA | 2 cut(s) | 142, 471 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 252, 284 |
| AluBI | AGCT | 5 cut(s) | 42, 115, 165, 335, 368 |
| AluI | AGCT | 5 cut(s) | 42, 115, 165, 335, 368 |
| Alw21I | GWGCWC | 1 cut(s) | 44 |
| AlwI | GGATC | 1 cut(s) | 181 |
| ApoI | RAATTY | 1 cut(s) | 77 |
| AsuHPI | GGTGA | 2 cut(s) | 290, 316 |
| AsuII | TTCGAA | 1 cut(s) | 357 |
| BanII | GRGCYC | 1 cut(s) | 44 |
| Bbv12I | GWGCWC | 1 cut(s) | 44 |
| BccI | CCATC | 3 cut(s) | 244, 273, 433 |
| BlpI | GCTNAGC | 1 cut(s) | 111 |
| BmrI | ACTGGG | 2 cut(s) | 323, 380 |
| BmuI | ACTGGG | 2 cut(s) | 323, 380 |
| Bpu10I | CCTNAGC | 1 cut(s) | 300 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 111 |
| Bpu14I | TTCGAA | 1 cut(s) | 357 |
| BsaJI | CCNNGG | 1 cut(s) | 255 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 36, 240, 270, 271 |
| Bse1I | ACTGG | 2 cut(s) | 318, 386 |
| BseDI | CCNNGG | 1 cut(s) | 255 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 36, 240, 270, 271 |
| BseMII | CTCAG | 1 cut(s) | 186 |
| BseNI | ACTGG | 2 cut(s) | 318, 386 |
| BsiHKAI | GWGCWC | 1 cut(s) | 44 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 36, 240, 270, 271 |
| BsmI | GAATGC | 2 cut(s) | 301, 313 |
| Bsp119I | TTCGAA | 1 cut(s) | 357 |
| Bsp1286I | GDGCHC | 1 cut(s) | 44 |
| Bsp143I | GATC | 1 cut(s) | 173 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 111 |
| BspACI | CCGC | 1 cut(s) | 419 |
| BspCNI | CTCAG | 1 cut(s) | 187 |
| BspPI | GGATC | 1 cut(s) | 181 |
| BspT104I | TTCGAA | 1 cut(s) | 357 |
| BsrI | ACTGG | 2 cut(s) | 318, 386 |
| BssECI | CCNNGG | 1 cut(s) | 255 |
| BssMI | GATC | 1 cut(s) | 173 |
| BssT1I | CCWWGG | 1 cut(s) | 255 |
| Bst4CI | ACNGT | 2 cut(s) | 27, 451 |
| Bst6I | CTCTTC | 1 cut(s) | 285 |
| BstBI | TTCGAA | 1 cut(s) | 357 |
| BstC8I | GCNNGC | 1 cut(s) | 108 |
| BstDEI | CTNAG | 4 cut(s) | 111, 120, 195, 300 |
| BstKTI | GATC | 1 cut(s) | 176 |
| BstMBI | GATC | 1 cut(s) | 173 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 107, 112, 121 |
| BstNSI | RCATGY | 1 cut(s) | 218 |
| BtsI | GCAGTG | 1 cut(s) | 96 |
| BtsIMutI | CAGTG | 3 cut(s) | 96, 190, 311 |
| Cac8I | GCNNGC | 1 cut(s) | 108 |
| CseI | GACGC | 1 cut(s) | 112 |
| CviAII | CATG | 1 cut(s) | 215 |
| DdeI | CTNAG | 4 cut(s) | 111, 120, 195, 300 |
| DpnI | GATC | 1 cut(s) | 175 |
| DpnII | GATC | 1 cut(s) | 173 |
| Eam1104I | CTCTTC | 1 cut(s) | 285 |
| EarI | CTCTTC | 1 cut(s) | 285 |
| EciI | GGCGGA | 1 cut(s) | 434 |
| Ecl136II | GAGCTC | 1 cut(s) | 42 |
| Eco130I | CCWWGG | 1 cut(s) | 255 |
| Eco24I | GRGCYC | 1 cut(s) | 44 |
| Eco53kI | GAGCTC | 1 cut(s) | 42 |
| EcoICRI | GAGCTC | 1 cut(s) | 42 |
| EcoT14I | CCWWGG | 1 cut(s) | 255 |
| EcoT38I | GRGCYC | 1 cut(s) | 44 |
| ErhI | CCWWGG | 1 cut(s) | 255 |
| FaeI | CATG | 1 cut(s) | 218 |
| FaiI | YATR | 3 cut(s) | 84, 216, 332 |
| FatI | CATG | 1 cut(s) | 214 |
| FriOI | GRGCYC | 1 cut(s) | 44 |
| HgaI | GACGC | 1 cut(s) | 112 |
| Hin1II | CATG | 1 cut(s) | 218 |
| HinfI | GANTC | 4 cut(s) | 69, 158, 354, 477 |
| HphI | GGTGA | 2 cut(s) | 290, 316 |
| Hpy188I | TCNGA | 2 cut(s) | 68, 482 |
| Hpy188III | TCNNGA | 1 cut(s) | 224 |
| Hpy99I | CGWCG | 1 cut(s) | 106 |
| HpyAV | CCTTC | 1 cut(s) | 68 |
| HpyCH4III | ACNGT | 2 cut(s) | 27, 451 |
| HpyCH4V | TGCA | 1 cut(s) | 311 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 107, 112, 121 |
| HpyF3I | CTNAG | 4 cut(s) | 111, 120, 195, 300 |
| Hsp92II | CATG | 1 cut(s) | 218 |
| Kzo9I | GATC | 1 cut(s) | 173 |
| LmnI | GCTCC | 1 cut(s) | 39 |
| LpnPI | CCDG | 7 cut(s) | 175, 209, 225, 299, 364, 399, 400 |
| MaeIII | GTNAC | 2 cut(s) | 217, 400 |
| MalI | GATC | 1 cut(s) | 175 |
| MboI | GATC | 1 cut(s) | 173 |
| MboII | GAAGA | 4 cut(s) | 167, 302, 338, 418 |
| MhlI | GDGCHC | 1 cut(s) | 44 |
| MluCI | AATT | 3 cut(s) | 20, 77, 471 |
| MmeI | TCCRAC | 1 cut(s) | 17 |
| MnlI | CCTC | 5 cut(s) | 58, 274, 337, 391, 436 |
| Mva1269I | GAATGC | 2 cut(s) | 301, 313 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 107, 112, 121 |
| NdeII | GATC | 1 cut(s) | 173 |
| NlaIII | CATG | 1 cut(s) | 218 |
| NmuCI | GTSAC | 1 cut(s) | 217 |
| NspI | RCATGY | 1 cut(s) | 218 |
| NspV | TTCGAA | 1 cut(s) | 357 |
| PciI | ACATGT | 1 cut(s) | 214 |
| PctI | GAATGC | 2 cut(s) | 301, 313 |
| PfeI | GAWTC | 4 cut(s) | 69, 158, 354, 477 |
| PscI | ACATGT | 1 cut(s) | 214 |
| Psp124BI | GAGCTC | 1 cut(s) | 44 |
| SacI | GAGCTC | 1 cut(s) | 44 |
| Sau3AI | GATC | 1 cut(s) | 173 |
| SduI | GDGCHC | 1 cut(s) | 44 |
| SetI | ASST | 9 cut(s) | 44, 50, 117, 167, 285, 306, 337, 370, 402 |
| SfuI | TTCGAA | 1 cut(s) | 357 |
| Sse9I | AATT | 3 cut(s) | 20, 77, 471 |
| SsiI | CCGC | 1 cut(s) | 419 |
| SstI | GAGCTC | 1 cut(s) | 44 |
| StyI | CCWWGG | 1 cut(s) | 255 |
| TaaI | ACNGT | 2 cut(s) | 27, 451 |
| TaqI | TCGA | 2 cut(s) | 357, 437 |
| TasI | AATT | 3 cut(s) | 20, 77, 471 |
| TfiI | GAWTC | 4 cut(s) | 69, 158, 354, 477 |
| TscAI | CASTG | 3 cut(s) | 103, 190, 318 |
| TseFI | GTSAC | 1 cut(s) | 217 |
| Tsp45I | GTSAC | 1 cut(s) | 217 |
| TspDTI | ATGAA | 2 cut(s) | 50, 71 |
| TspRI | CASTG | 3 cut(s) | 103, 190, 318 |
| XapI | RAATTY | 1 cut(s) | 77 |
| XceI | RCATGY | 1 cut(s) | 218 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 272 |