Rh3BG328800

Universal stress protein A-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Reverse (-)
34353629 .. 34355004
1376 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG328800.1

Sequence Viewer

Length: 345 bp
ATGGGGAAGGCACGGACTGTTGGTATAGGCATGGATTACTCTGCAGCGAGCAAATCTGCTTTACGATGGACGGTCGATAATCTGATTGAAGAAGGAGATCGCATCATATTGATCCATGTTGAACGACCCAAAGCTACCAGAAAGCAGCTATTCGAAGATACGGGATCACCTTTGATTCCTTTGGAAGAATTTAATGACTCAAAGCAGTATGGACTCACTAATGACCCAGAGGTTCTCGATATCCTTGATACTGTGTCAAGAACTAAAGGGGTAAGTACGTATTTCAATTTTCAAACAAAGAGTAAGAGTTTTATAGCTAGCTTTCTGTATAAATTAAATTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

114

Amino Acids

12.86

Weight (kDa)

6.58

Isoelectric Point (pI)

32.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013275)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 106, 172
AcsI RAATTY 2 cut(s) 188, 337
AfaI GTAC 1 cut(s) 277
AgsI TTSAA 4 cut(s) 89, 122, 286, 293
AluBI AGCT 4 cut(s) 134, 148, 317, 321
AluI AGCT 4 cut(s) 134, 148, 317, 321
AlwI GGATC 2 cut(s) 106, 172
ApeKI GCWGC 2 cut(s) 44, 145
ApoI RAATTY 2 cut(s) 188, 337
AsuHPI GGTGA 1 cut(s) 159
AsuII TTCGAA 1 cut(s) 153
AsuNHI GCTAGC 1 cut(s) 317
BbvI GCAGC 2 cut(s) 56, 157
BccI CCATC 1 cut(s) 60
BfaI CTAG 1 cut(s) 318
BfmI CTRYAG 1 cut(s) 42
BisI GCNGC 2 cut(s) 45, 146
BlsI GCNGC 2 cut(s) 46, 147
BmsI GCATC 1 cut(s) 111
BmtI GCTAGC 1 cut(s) 321
Bpu14I TTCGAA 1 cut(s) 153
BsaAI YACGTR 1 cut(s) 279
BseXI GCAGC 2 cut(s) 56, 157
Bsh1285I CGRYCG 1 cut(s) 75
BsiEI CGRYCG 1 cut(s) 75
Bsp119I TTCGAA 1 cut(s) 153
Bsp143I GATC 3 cut(s) 97, 111, 164
BspMAI CTGCAG 1 cut(s) 46
BspOI GCTAGC 1 cut(s) 321
BspPI GGATC 2 cut(s) 106, 172
BspT104I TTCGAA 1 cut(s) 153
BssMI GATC 3 cut(s) 97, 111, 164
Bst4CI ACNGT 3 cut(s) 19, 73, 253
BstBAI YACGTR 1 cut(s) 279
BstBI TTCGAA 1 cut(s) 153
BstC8I GCNNGC 2 cut(s) 49, 319
BstKTI GATC 3 cut(s) 100, 114, 167
BstMBI GATC 3 cut(s) 97, 111, 164
BstMCI CGRYCG 1 cut(s) 75
BstSFI CTRYAG 1 cut(s) 42
BstSNI TACGTA 1 cut(s) 279
BstV1I GCAGC 2 cut(s) 56, 157
Cac8I GCNNGC 2 cut(s) 49, 319
Csp6I GTAC 1 cut(s) 276
CviAII CATG 2 cut(s) 31, 116
CviJI RGCY 4 cut(s) 134, 148, 317, 321
CviKI_1 RGCY 4 cut(s) 134, 148, 317, 321
CviQI GTAC 1 cut(s) 276
DpnI GATC 3 cut(s) 99, 113, 166
DpnII GATC 3 cut(s) 97, 111, 164
Eco105I TACGTA 1 cut(s) 279
Eco32I GATATC 1 cut(s) 241
EcoRV GATATC 1 cut(s) 241
FaeI CATG 2 cut(s) 34, 119
FaiI YATR 7 cut(s) 26, 32, 107, 117, 210, 314, 330
FatI CATG 2 cut(s) 30, 115
Fnu4HI GCNGC 2 cut(s) 45, 146
Fsp4HI GCNGC 2 cut(s) 45, 146
FspBI CTAG 1 cut(s) 318
GluI GCNGC 2 cut(s) 45, 146
Hin1II CATG 2 cut(s) 34, 119
HinfI GANTC 3 cut(s) 175, 197, 213
HphI GGTGA 1 cut(s) 159
Hpy188I TCNGA 1 cut(s) 84
Hpy188III TCNNGA 2 cut(s) 236, 258
HpyAV CCTTC 1 cut(s) 86
HpyCH4III ACNGT 3 cut(s) 19, 73, 253
HpyCH4IV ACGT 1 cut(s) 278
HpyCH4V TGCA 1 cut(s) 44
HpySE526I ACGT 1 cut(s) 278
Hsp92II CATG 2 cut(s) 34, 119
Kzo9I GATC 3 cut(s) 97, 111, 164
LpnPI CCDG 2 cut(s) 151, 240
Lsp1109I GCAGC 2 cut(s) 56, 157
LweI GCATC 1 cut(s) 111
MaeI CTAG 1 cut(s) 318
MaeII ACGT 1 cut(s) 278
MalI GATC 3 cut(s) 99, 113, 166
MboI GATC 3 cut(s) 97, 111, 164
MboII GAAGA 3 cut(s) 101, 167, 197
MluCI AATT 4 cut(s) 188, 286, 332, 337
MlyI GAGTC 2 cut(s) 191, 207
MnlI CCTC 1 cut(s) 223
MseI TTAA 2 cut(s) 192, 335
NdeII GATC 3 cut(s) 97, 111, 164
NheI GCTAGC 1 cut(s) 317
NlaIII CATG 2 cut(s) 34, 119
NspV TTCGAA 1 cut(s) 153
PfeI GAWTC 1 cut(s) 175
PkrI GCNGC 2 cut(s) 46, 147
PleI GAGTC 2 cut(s) 191, 207
PpsI GAGTC 2 cut(s) 191, 207
Ppu21I YACGTR 1 cut(s) 279
PstI CTGCAG 1 cut(s) 46
RsaI GTAC 1 cut(s) 277
RsaNI GTAC 1 cut(s) 276
SaqAI TTAA 2 cut(s) 192, 335
SatI GCNGC 2 cut(s) 45, 146
Sau3AI GATC 3 cut(s) 97, 111, 164
SchI GAGTC 2 cut(s) 191, 207
SetI ASST 7 cut(s) 136, 150, 172, 234, 281, 319, 323
SfaNI GCATC 1 cut(s) 111
SfcI CTRYAG 1 cut(s) 42
SfuI TTCGAA 1 cut(s) 153
SnaBI TACGTA 1 cut(s) 279
Sse9I AATT 4 cut(s) 188, 286, 332, 337
SspMI CTAG 1 cut(s) 318
TaaI ACNGT 3 cut(s) 19, 73, 253
TaiI ACGT 1 cut(s) 281
TaqI TCGA 3 cut(s) 75, 153, 237
TasI AATT 4 cut(s) 188, 286, 332, 337
TfiI GAWTC 1 cut(s) 175
Tru1I TTAA 2 cut(s) 192, 335
Tru9I TTAA 2 cut(s) 192, 335
TseI GCWGC 2 cut(s) 44, 145
TspGWI ACGGA 1 cut(s) 28
XapI RAATTY 2 cut(s) 188, 337
XspI CTAG 1 cut(s) 318
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.