Stem-specific protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G22850 AT5G43830 |
| fragaria_vesca | FvH4_4g01560 |
| malus_domestica | MD13G1201000.v1.1 MD16G1200200.v1.1 |
| prunus_persica | Prupe.1G022400_v2.0.a1 Prupe.1G022400_v2.0.a1 |
| pyrus_communis | pycom13g17440 pycom16g16940 |
| rosa_chinensis | RchiOBHm_Chr4g0388131 |
| rosa_laevigata | RLG00000010078 |
| rosa_multiflora | Rmu_sc0002509.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00334680 |
| rosa_rugosa | Rorug03G0315000 |
| rosa_samantha | Rh4AG020800 Rh4BG015200 Rh4CG021400 Rh4DG016000 |
| rosa_wichuraiana | Rw4G001390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 41, 440, 492 |
| AcuI | CTGAAG | 2 cut(s) | 336, 558 |
| AfaI | GTAC | 1 cut(s) | 158 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 551, 552 |
| AgsI | TTSAA | 5 cut(s) | 118, 152, 252, 454, 505 |
| AluBI | AGCT | 1 cut(s) | 269 |
| AluI | AGCT | 1 cut(s) | 269 |
| Alw21I | GWGCWC | 1 cut(s) | 438 |
| Alw26I | GTCTC | 1 cut(s) | 262 |
| AoxI | GGCC | 2 cut(s) | 73, 418 |
| ApeKI | GCWGC | 2 cut(s) | 269, 560 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 310 |
| AspS9I | GGNCC | 2 cut(s) | 179, 418 |
| AsuHPI | GGTGA | 1 cut(s) | 148 |
| AvaII | GGWCC | 1 cut(s) | 179 |
| AxyI | CCTNAGG | 1 cut(s) | 422 |
| BbsI | GAAGAC | 1 cut(s) | 564 |
| Bbv12I | GWGCWC | 1 cut(s) | 438 |
| BbvCI | CCTCAGC | 1 cut(s) | 516 |
| BbvI | GCAGC | 2 cut(s) | 256, 547 |
| BccI | CCATC | 1 cut(s) | 275 |
| BclI | TGATCA | 2 cut(s) | 138, 193 |
| BcoDI | GTCTC | 1 cut(s) | 262 |
| BfaI | CTAG | 2 cut(s) | 522, 534 |
| BisI | GCNGC | 2 cut(s) | 270, 561 |
| BlsI | GCNGC | 2 cut(s) | 271, 562 |
| Bme18I | GGWCC | 1 cut(s) | 179 |
| BmgT120I | GGNCC | 2 cut(s) | 179, 418 |
| BmiI | GGNNCC | 1 cut(s) | 419 |
| BmsI | GCATC | 2 cut(s) | 331, 502 |
| BpiI | GAAGAC | 1 cut(s) | 564 |
| Bpu10I | CCTNAGC | 1 cut(s) | 516 |
| BpuEI | CTTGAG | 1 cut(s) | 83 |
| BsaI | GGTCTC | 1 cut(s) | 262 |
| BsaJI | CCNNGG | 3 cut(s) | 70, 214, 464 |
| BsaWI | WCCGGW | 1 cut(s) | 479 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 551, 552 |
| Bse1I | ACTGG | 1 cut(s) | 572 |
| Bse21I | CCTNAGG | 1 cut(s) | 422 |
| Bse3DI | GCAATG | 1 cut(s) | 292 |
| BseDI | CCNNGG | 3 cut(s) | 70, 214, 464 |
| BseGI | GGATG | 3 cut(s) | 55, 401, 407 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 551, 552 |
| BseMI | GCAATG | 1 cut(s) | 292 |
| BseMII | CTCAG | 2 cut(s) | 413, 507 |
| BseNI | ACTGG | 1 cut(s) | 572 |
| BseRI | GAGGAG | 1 cut(s) | 439 |
| BseXI | GCAGC | 2 cut(s) | 256, 547 |
| BshFI | GGCC | 2 cut(s) | 75, 420 |
| BsiHKAI | GWGCWC | 1 cut(s) | 438 |
| BsiSI | CCGG | 1 cut(s) | 480 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 551, 552 |
| BsmAI | GTCTC | 1 cut(s) | 262 |
| BsmI | GAATGC | 1 cut(s) | 546 |
| BsnI | GGCC | 2 cut(s) | 75, 420 |
| Bso31I | GGTCTC | 1 cut(s) | 262 |
| Bsp1286I | GDGCHC | 1 cut(s) | 438 |
| Bsp143I | GATC | 3 cut(s) | 138, 172, 193 |
| BspACI | CCGC | 3 cut(s) | 41, 440, 492 |
| BspANI | GGCC | 2 cut(s) | 75, 420 |
| BspCNI | CTCAG | 2 cut(s) | 414, 508 |
| BspLI | GGNNCC | 1 cut(s) | 419 |
| BspQI | GCTCTTC | 1 cut(s) | 99 |
| BspTNI | GGTCTC | 1 cut(s) | 262 |
| BsrDI | GCAATG | 1 cut(s) | 292 |
| BsrI | ACTGG | 1 cut(s) | 572 |
| BssECI | CCNNGG | 3 cut(s) | 70, 214, 464 |
| BssMI | GATC | 3 cut(s) | 138, 172, 193 |
| BssT1I | CCWWGG | 3 cut(s) | 70, 214, 464 |
| Bst6I | CTCTTC | 1 cut(s) | 99 |
| BstDEI | CTNAG | 2 cut(s) | 422, 516 |
| BstF5I | GGATG | 3 cut(s) | 55, 401, 407 |
| BstKTI | GATC | 3 cut(s) | 141, 175, 196 |
| BstMAI | GTCTC | 1 cut(s) | 262 |
| BstMBI | GATC | 3 cut(s) | 138, 172, 193 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 341 |
| BstV1I | GCAGC | 2 cut(s) | 256, 547 |
| BstV2I | GAAGAC | 1 cut(s) | 564 |
| Bsu36I | CCTNAGG | 1 cut(s) | 422 |
| BsuRI | GGCC | 2 cut(s) | 75, 420 |
| BtsCI | GGATG | 3 cut(s) | 55, 401, 407 |
| BtsI | GCAGTG | 2 cut(s) | 243, 465 |
| BtsIMutI | CAGTG | 2 cut(s) | 243, 465 |
| Cfr13I | GGNCC | 2 cut(s) | 179, 418 |
| Csp6I | GTAC | 1 cut(s) | 157 |
| CviJI | RGCY | 7 cut(s) | 34, 75, 128, 269, 363, 420, 521 |
| CviKI_1 | RGCY | 7 cut(s) | 34, 75, 128, 269, 363, 420, 521 |
| CviQI | GTAC | 1 cut(s) | 157 |
| DdeI | CTNAG | 2 cut(s) | 422, 516 |
| DpnI | GATC | 3 cut(s) | 140, 174, 195 |
| DpnII | GATC | 3 cut(s) | 138, 172, 193 |
| Eam1104I | CTCTTC | 1 cut(s) | 99 |
| EarI | CTCTTC | 1 cut(s) | 99 |
| Eco130I | CCWWGG | 3 cut(s) | 70, 214, 464 |
| Eco31I | GGTCTC | 1 cut(s) | 262 |
| Eco32I | GATATC | 1 cut(s) | 211 |
| Eco47I | GGWCC | 1 cut(s) | 179 |
| Eco57I | CTGAAG | 2 cut(s) | 336, 558 |
| Eco81I | CCTNAGG | 1 cut(s) | 422 |
| EcoO109I | RGGNCCY | 1 cut(s) | 418 |
| EcoRV | GATATC | 1 cut(s) | 211 |
| EcoT14I | CCWWGG | 3 cut(s) | 70, 214, 464 |
| ErhI | CCWWGG | 3 cut(s) | 70, 214, 464 |
| FaiI | YATR | 5 cut(s) | 11, 111, 240, 444, 490 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 309, 341 |
| FauI | CCCGC | 1 cut(s) | 447 |
| FbaI | TGATCA | 2 cut(s) | 138, 193 |
| Fnu4HI | GCNGC | 2 cut(s) | 270, 561 |
| FokI | GGATG | 3 cut(s) | 62, 394, 408 |
| Fsp4HI | GCNGC | 2 cut(s) | 270, 561 |
| FspBI | CTAG | 2 cut(s) | 522, 534 |
| GluI | GCNGC | 2 cut(s) | 270, 561 |
| HaeIII | GGCC | 2 cut(s) | 75, 420 |
| HapII | CCGG | 1 cut(s) | 480 |
| HinfI | GANTC | 2 cut(s) | 311, 530 |
| HpaII | CCGG | 1 cut(s) | 480 |
| HphI | GGTGA | 1 cut(s) | 148 |
| Hpy188I | TCNGA | 3 cut(s) | 22, 316, 577 |
| HpyAV | CCTTC | 4 cut(s) | 311, 352, 448, 520 |
| HpyCH4V | TGCA | 3 cut(s) | 344, 380, 497 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 341 |
| HpyF3I | CTNAG | 2 cut(s) | 422, 516 |
| Ksp22I | TGATCA | 2 cut(s) | 138, 193 |
| Kzo9I | GATC | 3 cut(s) | 138, 172, 193 |
| LguI | GCTCTTC | 1 cut(s) | 99 |
| Lsp1109I | GCAGC | 2 cut(s) | 256, 547 |
| LweI | GCATC | 2 cut(s) | 331, 502 |
| MaeI | CTAG | 2 cut(s) | 522, 534 |
| MalI | GATC | 3 cut(s) | 140, 174, 195 |
| MboI | GATC | 3 cut(s) | 138, 172, 193 |
| MboII | GAAGA | 4 cut(s) | 86, 367, 394, 564 |
| MhlI | GDGCHC | 1 cut(s) | 438 |
| MlyI | GAGTC | 1 cut(s) | 539 |
| MnlI | CCTC | 4 cut(s) | 127, 417, 421, 511 |
| MroXI | GAANNNNTTC | 1 cut(s) | 310 |
| MspI | CCGG | 1 cut(s) | 480 |
| Mva1269I | GAATGC | 1 cut(s) | 546 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 341 |
| NdeII | GATC | 3 cut(s) | 138, 172, 193 |
| NlaIV | GGNNCC | 1 cut(s) | 419 |
| PciSI | GCTCTTC | 1 cut(s) | 99 |
| PctI | GAATGC | 1 cut(s) | 546 |
| PdmI | GAANNNNTTC | 1 cut(s) | 310 |
| PfeI | GAWTC | 1 cut(s) | 311 |
| PkrI | GCNGC | 2 cut(s) | 271, 562 |
| PleI | GAGTC | 1 cut(s) | 538 |
| PpsI | GAGTC | 1 cut(s) | 538 |
| PspN4I | GGNNCC | 1 cut(s) | 419 |
| PspPI | GGNCC | 2 cut(s) | 179, 418 |
| RsaI | GTAC | 1 cut(s) | 158 |
| RsaNI | GTAC | 1 cut(s) | 157 |
| SapI | GCTCTTC | 1 cut(s) | 99 |
| SatI | GCNGC | 2 cut(s) | 270, 561 |
| Sau3AI | GATC | 3 cut(s) | 138, 172, 193 |
| Sau96I | GGNCC | 2 cut(s) | 179, 418 |
| SchI | GAGTC | 1 cut(s) | 539 |
| SduI | GDGCHC | 1 cut(s) | 438 |
| SetI | ASST | 6 cut(s) | 138, 201, 258, 271, 489, 510 |
| SfaNI | GCATC | 2 cut(s) | 331, 502 |
| SinI | GGWCC | 1 cut(s) | 179 |
| SmlI | CTYRAG | 1 cut(s) | 98 |
| SmoI | CTYRAG | 1 cut(s) | 98 |
| SsiI | CCGC | 3 cut(s) | 41, 440, 492 |
| SspMI | CTAG | 2 cut(s) | 522, 534 |
| StyI | CCWWGG | 3 cut(s) | 70, 214, 464 |
| TfiI | GAWTC | 1 cut(s) | 311 |
| TscAI | CASTG | 2 cut(s) | 250, 465 |
| TseI | GCWGC | 2 cut(s) | 269, 560 |
| TspRI | CASTG | 2 cut(s) | 250, 465 |
| VpaK11BI | GGWCC | 1 cut(s) | 179 |
| XmnI | GAANNNNTTC | 1 cut(s) | 310 |
| XspI | CTAG | 2 cut(s) | 522, 534 |