Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0016308

Physical Location & Seq

Genomic Coordinates Reverse (-)

56718780 .. 56721284

Gene Structure 2505 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG252800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1164 bp

ATGGGAAGAGCGCCGTGCTGTGAAAAAGTTGGGCTAAAAAGAGGAAGGTGGACAGCCGAAGAAGACGAGATCTTGACAAACTACATTCAACTCCATGGAGAAGGCTCTTGGAGATCTTTGCCCAAGAATGCAGGTTTGCTAAGGTGCGGGAAGAGTTGCAGACTGAGGTGGATAAATTATCTGAGGACTGACTTGAGGAGAGGGAACATCACACAAGAGGAGGAAGAAACCATTGTTAAGTTGCACACTGCTTTGGGTAATAGGTGGTCATTGATTGCTGCACACTTACCAGGAAGAACAGACAATGAGATTAAAAACTACTGGAACTCTCATTTGAGTCGCAAAATTTACACCTTCACCAAGCTTATGAAAAACGAATGTCTCATCCCCACCATGATCAATAATGTTTCGAAGTTAGCTGCTGCGAAATCGAAGCGCAGAGTACGTACAAGCAGATCCGCCATGAAAAGCAAGAATAAGCTCAACAAGAATGGTACAGTACTAGCCCCATTTCCACAAGTTCCAAAGCCAGCTTATAAGAGTGATGTGTTTGAATCATTAACCGGAGAAAACCCAAATCAAGTGCAAACCAGTCATTCAATGGGCTTGGAGTGTTGGGCCCCAAAAGAGAGAGATGAAAAAGAGGAAGAGGAGAAGACAACAAGAACGTTGGGTGGTGTGCAAGGTTCTTGCTTGGATATTACAGCAGGGATGATTAGTTCCACTACTCCTGCTATATATGCTGCTAATAATGGAGAAAAAGAGGCATTGGACCCATATGAATGTGTAGACAGTGATGTAATTGTGGATCACAACCCAAGTGGGGGTACCACTGTTGTAGGGTTTAAGGAGCAGAGAGAAAATGGGGTCATGGGTTTTACAGATGACCATGAGGTGACCATAAAGAGTCATCAAGGTATTTGGAGCTCAAATATTGAAGGGAGCTGTGGTGAGATGTATGCTTTCTCGTCACCACTGAATGCCGCCTTTGATGATCATGAATGGCTCGATTGTGATTGGGTAGGTGGTGGTGGTGGTCTTCAATGTCATAATGATGAATTGGAGTTATGGGATGAAGGAGAGGTGAGGATACCTTGGTTATGGGAGAGTGGCAATGACGTCGGTGATCAAAGAGACAATGACGTCGGTGATCAAAGAGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009812 GO:0009813 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009963 GO:0009987 GO:0010033 GO:0010224 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0042221 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046148 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051552 GO:0051553 GO:0051554 GO:0051555 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:0140110 GO:1900384 GO:1900386 GO:1901363 GO:1901576 GO:1901615 GO:1901617 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

387

Amino Acids

43.36

Weight (kDa)

5.51

Isoelectric Point (pI)

51.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	14 - 61	4.5e-16	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	17 - 77	1.8e-09	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	67 - 112	3.1e-17	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	71 - 117	1.6e-09	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0016308)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g19310
malus_domestica	MD13G1158000.v1.1 MD16G1158800.v1.1
prunus_persica	Prupe.1G125300_v2.0.a1
pyrus_communis	pycom13g13510
rosa_chinensis	RchiOBHm_Chr4g0424331
rosa_laevigata	RLG00000007485
rosa_multiflora	Rmu_sc0002260.1_g000004
rosa_roxburghii	Rroxscaffold_5G00366280
rosa_rugosa	Rorug04G0195900
rosa_samantha	Rh4AG252800 Rh4BG258200 Rh4CG269100 Rh4DG252600
rosa_wichuraiana	Rw4G021800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	537
AasI	GACNNNNNNGTC	1 cut(s)	1142
AatII	GACGTC	2 cut(s)	1122, 1146
Acc36I	ACCTGC	1 cut(s)	122
Acc65I	GGTACC	1 cut(s)	827
AccB1I	GGYRCC	1 cut(s)	827
AccI	GTMKAC	1 cut(s)	789
AciI	CCGC	3 cut(s)	147, 459, 984
AclI	AACGTT	1 cut(s)	668
AclWI	GGATC	2 cut(s)	450, 816
AcsI	RAATTY	1 cut(s)	345
AcyI	GRCGYC	2 cut(s)	1119, 1143
AfaI	GTAC	5 cut(s)	444, 448, 496, 501, 829
AfiI	CCNNNNNNNGG	2 cut(s)	823, 824
AgsI	TTSAA	5 cut(s)	89, 554, 600, 938, 1043
AjnI	CCWGG	1 cut(s)	289
AloI	GAACNNNNNNTCC	2 cut(s)	703, 735
AluBI	AGCT	6 cut(s)	364, 419, 481, 533, 927, 945
AluI	AGCT	6 cut(s)	364, 419, 481, 533, 927, 945
Alw21I	GWGCWC	1 cut(s)	929
Alw26I	GTCTC	3 cut(s)	386, 1128, 1152
AlwI	GGATC	2 cut(s)	450, 816
AoxI	GGCC	1 cut(s)	618
ApaI	GGGCCC	1 cut(s)	622
ApeKI	GCWGC	4 cut(s)	278, 419, 422, 743
ApoI	RAATTY	1 cut(s)	345
Asp718I	GGTACC	1 cut(s)	827
AspLEI	GCGC	2 cut(s)	13, 438
AspS9I	GGNCC	3 cut(s)	618, 619, 772
AsuHPI	GGTGA	7 cut(s)	349, 907, 962, 963, 1096, 1136, 1160
AsuII	TTCGAA	1 cut(s)	410
AvaII	GGWCC	1 cut(s)	772
BaeGI	GKGCMC	1 cut(s)	622
BaeI	ACNNNNGTAYC	4 cut(s)	819, 852, 1082, 1115
BanI	GGYRCC	1 cut(s)	827
BanII	GRGCYC	2 cut(s)	622, 929
BbsI	GAAGAC	3 cut(s)	69, 662, 1031
Bbv12I	GWGCWC	1 cut(s)	929
BbvI	GCAGC	4 cut(s)	265, 406, 409, 730
BcgI	CGANNNNNNTGC	2 cut(s)	1102, 1136
BciT130I	CCWGG	1 cut(s)	291
BciVI	GTATCC	1 cut(s)	1083
BclI	TGATCA	4 cut(s)	396, 994, 1126, 1150
BcoDI	GTCTC	3 cut(s)	386, 1128, 1152
BfaI	CTAG	1 cut(s)	503
BfoI	RGCGCY	1 cut(s)	14
BfuAI	ACCTGC	1 cut(s)	122
BfuI	GTATCC	1 cut(s)	1083
BglII	AGATCT	2 cut(s)	69, 113
BisI	GCNGC	5 cut(s)	279, 420, 423, 744, 984
BlsI	GCNGC	5 cut(s)	280, 421, 424, 745, 985
BmcAI	AGTACT	1 cut(s)	501
Bme1390I	CCNGG	1 cut(s)	291
Bme18I	GGWCC	1 cut(s)	772
BmgT120I	GGNCC	3 cut(s)	618, 619, 772
BmiI	GGNNCC	4 cut(s)	620, 621, 774, 829
BmrFI	CCNGG	1 cut(s)	291
BpiI	GAAGAC	3 cut(s)	69, 662, 1031
Bpu10I	CCTNAGC	1 cut(s)	140
Bpu14I	TTCGAA	1 cut(s)	410
BpuEI	CTTGAG	1 cut(s)	214
BsaAI	YACGTR	1 cut(s)	446
BsaHI	GRCGYC	2 cut(s)	1119, 1143
BsaJI	CCNNGG	2 cut(s)	94, 1094
BsaWI	WCCGGW	1 cut(s)	563
BsaXI	ACNNNNNCTCC	2 cut(s)	934, 964
Bsc4I	CCNNNNNNNGG	2 cut(s)	823, 824
Bse1I	ACTGG	2 cut(s)	326, 591
Bse3DI	GCAATG	1 cut(s)	1120
BseBI	CCWGG	1 cut(s)	291
BseDI	CCNNGG	2 cut(s)	94, 1094
BseGI	GGATG	3 cut(s)	384, 717, 1078
BseLI	CCNNNNNNNGG	2 cut(s)	823, 824
BseMI	GCAATG	1 cut(s)	1120
BseMII	CTCAG	2 cut(s)	155, 173
BseNI	ACTGG	2 cut(s)	326, 591
BseRI	GAGGAG	3 cut(s)	211, 233, 665
BseSI	GKGCMC	1 cut(s)	622
BseXI	GCAGC	4 cut(s)	265, 406, 409, 730
BsgI	GTGCAG	1 cut(s)	264
BshFI	GGCC	1 cut(s)	620
BshNI	GGYRCC	1 cut(s)	827
BsiHKAI	GWGCWC	1 cut(s)	929
BsiSI	CCGG	1 cut(s)	564
BslI	CCNNNNNNNGG	2 cut(s)	823, 824
BsmAI	GTCTC	3 cut(s)	386, 1128, 1152
BsmI	GAATGC	2 cut(s)	133, 985
BsnI	GGCC	1 cut(s)	620
Bsp119I	TTCGAA	1 cut(s)	410
Bsp120I	GGGCCC	1 cut(s)	618
Bsp1286I	GDGCHC	2 cut(s)	622, 929
Bsp143I	GATC	8 cut(s)	69, 113, 396, 455, 808, 994, 1126, 1150
Bsp19I	CCATGG	1 cut(s)	94
BspACI	CCGC	3 cut(s)	147, 459, 984
BspANI	GGCC	1 cut(s)	620
BspCNI	CTCAG	2 cut(s)	156, 174
BspHI	TCATGA	1 cut(s)	997
BspLI	GGNNCC	4 cut(s)	620, 621, 774, 829
BspMI	ACCTGC	1 cut(s)	122
BspPI	GGATC	2 cut(s)	450, 816
BspT104I	TTCGAA	1 cut(s)	410
BspT107I	GGYRCC	1 cut(s)	827
BsrDI	GCAATG	1 cut(s)	1120
BsrI	ACTGG	2 cut(s)	326, 591
BssECI	CCNNGG	2 cut(s)	94, 1094
BssMI	GATC	8 cut(s)	69, 113, 396, 455, 808, 994, 1126, 1150
BssNI	GRCGYC	2 cut(s)	1119, 1143
BssT1I	CCWWGG	2 cut(s)	94, 1094
Bst2UI	CCWGG	1 cut(s)	291
Bst4CI	ACNGT	3 cut(s)	499, 794, 835
Bst6I	CTCTTC	2 cut(s)	146, 642
BstACI	GRCGYC	2 cut(s)	1119, 1143
BstBAI	YACGTR	1 cut(s)	446
BstBI	TTCGAA	1 cut(s)	410
BstC8I	GCNNGC	1 cut(s)	531
BstDEI	CTNAG	3 cut(s)	140, 164, 182
BstDSI	CCRYGG	1 cut(s)	94
BstEII	GGTNACC	1 cut(s)	895
BstF5I	GGATG	3 cut(s)	384, 717, 1078
BstH2I	RGCGCY	1 cut(s)	14
BstHHI	GCGC	2 cut(s)	13, 438
BstKTI	GATC	8 cut(s)	72, 116, 399, 458, 811, 997, 1129, 1153
BstMAI	GTCTC	3 cut(s)	386, 1128, 1152
BstMBI	GATC	8 cut(s)	69, 113, 396, 455, 808, 994, 1126, 1150
BstMWI	GCNNNNNNNGC	1 cut(s)	740
BstNI	CCWGG	1 cut(s)	291
BstPI	GGTNACC	1 cut(s)	895
BstSCI	CCNGG	1 cut(s)	289
BstSLI	GKGCMC	1 cut(s)	622
BstSNI	TACGTA	1 cut(s)	446
BstV1I	GCAGC	4 cut(s)	265, 406, 409, 730
BstV2I	GAAGAC	3 cut(s)	69, 662, 1031
BstX2I	RGATCY	3 cut(s)	69, 113, 455
BstYI	RGATCY	3 cut(s)	69, 113, 455
BsuI	GTATCC	1 cut(s)	1083
BsuRI	GGCC	1 cut(s)	620
BtgI	CCRYGG	1 cut(s)	94
BtsCI	GGATG	3 cut(s)	384, 717, 1078
BtsI	GCAGTG	1 cut(s)	246
BtsIMutI	CAGTG	4 cut(s)	246, 799, 831, 974
BveI	ACCTGC	1 cut(s)	122
Cac8I	GCNNGC	1 cut(s)	531
CciI	TCATGA	1 cut(s)	997
CfoI	GCGC	2 cut(s)	13, 438
Cfr13I	GGNCC	3 cut(s)	618, 619, 772
Csp6I	GTAC	5 cut(s)	443, 447, 495, 500, 828
CspCI	CAANNNNNGTGG	2 cut(s)	802, 837
CviAII	CATG	6 cut(s)	95, 394, 463, 871, 890, 998
CviQI	GTAC	5 cut(s)	443, 447, 495, 500, 828
DdeI	CTNAG	3 cut(s)	140, 164, 182
DpnI	GATC	8 cut(s)	71, 115, 398, 457, 810, 996, 1128, 1152
DpnII	GATC	8 cut(s)	69, 113, 396, 455, 808, 994, 1126, 1150
DrdI	GACNNNNNNGTC	1 cut(s)	1142
DseDI	GACNNNNNNGTC	1 cut(s)	1142
Eam1104I	CTCTTC	2 cut(s)	146, 642
EarI	CTCTTC	2 cut(s)	146, 642
EciI	GGCGGA	1 cut(s)	448
Ecl136II	GAGCTC	1 cut(s)	927
Eco105I	TACGTA	1 cut(s)	446
Eco130I	CCWWGG	2 cut(s)	94, 1094
Eco24I	GRGCYC	2 cut(s)	622, 929
Eco47I	GGWCC	1 cut(s)	772
Eco53kI	GAGCTC	1 cut(s)	927
Eco91I	GGTNACC	1 cut(s)	895
EcoICRI	GAGCTC	1 cut(s)	927
EcoO109I	RGGNCCY	1 cut(s)	619
EcoO65I	GGTNACC	1 cut(s)	895
EcoRII	CCWGG	1 cut(s)	289
EcoT14I	CCWWGG	2 cut(s)	94, 1094
EcoT38I	GRGCYC	2 cut(s)	622, 929
ErhI	CCWWGG	2 cut(s)	94, 1094
FaeI	CATG	6 cut(s)	98, 397, 466, 874, 893, 1001
FatI	CATG	6 cut(s)	94, 393, 462, 870, 889, 997
FauI	CCCGC	1 cut(s)	140
FauNDI	CATATG	1 cut(s)	778
FbaI	TGATCA	4 cut(s)	396, 994, 1126, 1150
FblI	GTMKAC	1 cut(s)	789
Fnu4HI	GCNGC	5 cut(s)	279, 420, 423, 744, 984
FokI	GGATG	3 cut(s)	371, 724, 1085
FriOI	GRGCYC	2 cut(s)	622, 929
Fsp4HI	GCNGC	5 cut(s)	279, 420, 423, 744, 984
FspBI	CTAG	1 cut(s)	503
GlaI	GCGC	2 cut(s)	12, 437
GluI	GCNGC	5 cut(s)	279, 420, 423, 744, 984
HaeII	RGCGCY	1 cut(s)	14
HaeIII	GGCC	1 cut(s)	620
HapII	CCGG	1 cut(s)	564
HhaI	GCGC	2 cut(s)	13, 438
Hin1I	GRCGYC	2 cut(s)	1119, 1143
Hin1II	CATG	6 cut(s)	98, 397, 466, 874, 893, 1001
Hin6I	GCGC	2 cut(s)	11, 436
HinP1I	GCGC	2 cut(s)	11, 436
HindIII	AAGCTT	1 cut(s)	362
HinfI	GANTC	3 cut(s)	337, 554, 907
HpaII	CCGG	1 cut(s)	564
HphI	GGTGA	7 cut(s)	349, 907, 962, 963, 1096, 1136, 1160
Hpy166II	GTNNAC	2 cut(s)	51, 790
Hpy188I	TCNGA	1 cut(s)	183
Hpy188III	TCNNGA	2 cut(s)	73, 998
Hpy8I	GTNNAC	2 cut(s)	51, 790
Hpy99I	CGWCG	2 cut(s)	1124, 1148
HpyAV	CCTTC	5 cut(s)	39, 95, 364, 932, 1070
HpyCH4III	ACNGT	3 cut(s)	499, 794, 835
HpyCH4IV	ACGT	4 cut(s)	445, 668, 1119, 1143
HpyCH4V	TGCA	6 cut(s)	131, 159, 244, 281, 586, 682
HpyF10VI	GCNNNNNNNGC	1 cut(s)	740
HpyF3I	CTNAG	3 cut(s)	140, 164, 182
HpySE526I	ACGT	4 cut(s)	445, 668, 1119, 1143
Hsp92I	GRCGYC	2 cut(s)	1119, 1143
Hsp92II	CATG	6 cut(s)	98, 397, 466, 874, 893, 1001
HspAI	GCGC	2 cut(s)	11, 436
KpnI	GGTACC	1 cut(s)	831
Ksp22I	TGATCA	4 cut(s)	396, 994, 1126, 1150
Kzo9I	GATC	8 cut(s)	69, 113, 396, 455, 808, 994, 1126, 1150
LmnI	GCTCC	3 cut(s)	850, 924, 942
LpnPI	CCDG	9 cut(s)	117, 276, 303, 307, 543, 577, 604, 693, 744
Lsp1109I	GCAGC	4 cut(s)	265, 406, 409, 730
MaeI	CTAG	1 cut(s)	503
MaeII	ACGT	4 cut(s)	445, 668, 1119, 1143
MaeIII	GTNAC	2 cut(s)	895, 969
MalI	GATC	8 cut(s)	71, 115, 398, 457, 810, 996, 1128, 1152
MboI	GATC	8 cut(s)	69, 113, 396, 455, 808, 994, 1126, 1150
MboII	GAAGA	9 cut(s)	18, 71, 74, 163, 236, 306, 659, 667, 1031
MflI	RGATCY	3 cut(s)	69, 113, 455
MhlI	GDGCHC	2 cut(s)	622, 929
MluCI	AATT	4 cut(s)	175, 345, 801, 1058
MlyI	GAGTC	2 cut(s)	346, 916
MseI	TTAA	4 cut(s)	237, 312, 560, 846
MslI	CAYNNNNRTG	2 cut(s)	781, 1053
MspI	CCGG	1 cut(s)	564
MspR9I	CCNGG	1 cut(s)	291
Mva1269I	GAATGC	2 cut(s)	133, 985
MvaI	CCWGG	1 cut(s)	291
MwoI	GCNNNNNNNGC	1 cut(s)	740
NcoI	CCATGG	1 cut(s)	94
NdeI	CATATG	1 cut(s)	778
NdeII	GATC	8 cut(s)	69, 113, 396, 455, 808, 994, 1126, 1150
NlaIII	CATG	6 cut(s)	98, 397, 466, 874, 893, 1001
NlaIV	GGNNCC	4 cut(s)	620, 621, 774, 829
NmuCI	GTSAC	2 cut(s)	895, 969
NspV	TTCGAA	1 cut(s)	410
PagI	TCATGA	1 cut(s)	997
PctI	GAATGC	2 cut(s)	133, 985
PfeI	GAWTC	1 cut(s)	554
PkrI	GCNGC	5 cut(s)	280, 421, 424, 745, 985
PleI	GAGTC	2 cut(s)	345, 915
PpsI	GAGTC	2 cut(s)	345, 915
Ppu21I	YACGTR	1 cut(s)	446
PsiI	TTATAA	1 cut(s)	537
Psp124BI	GAGCTC	1 cut(s)	929
Psp1406I	AACGTT	1 cut(s)	668
Psp6I	CCWGG	1 cut(s)	289
PspEI	GGTNACC	1 cut(s)	895
PspGI	CCWGG	1 cut(s)	289
PspN4I	GGNNCC	4 cut(s)	620, 621, 774, 829
PspOMI	GGGCCC	1 cut(s)	618
PspPI	GGNCC	3 cut(s)	618, 619, 772
PsuI	RGATCY	3 cut(s)	69, 113, 455
RsaI	GTAC	5 cut(s)	444, 448, 496, 501, 829
RsaNI	GTAC	5 cut(s)	443, 447, 495, 500, 828
RseI	CAYNNNNRTG	2 cut(s)	781, 1053
SacI	GAGCTC	1 cut(s)	929
SaqAI	TTAA	4 cut(s)	237, 312, 560, 846
SatI	GCNGC	5 cut(s)	279, 420, 423, 744, 984
Sau3AI	GATC	8 cut(s)	69, 113, 396, 455, 808, 994, 1126, 1150
Sau96I	GGNCC	3 cut(s)	618, 619, 772
ScaI	AGTACT	1 cut(s)	501
SchI	GAGTC	2 cut(s)	346, 916
ScrFI	CCNGG	1 cut(s)	291
SduI	GDGCHC	2 cut(s)	622, 929
SfuI	TTCGAA	1 cut(s)	410
SinI	GGWCC	1 cut(s)	772
SmiMI	CAYNNNNRTG	2 cut(s)	781, 1053
SmlI	CTYRAG	1 cut(s)	193
SmoI	CTYRAG	1 cut(s)	193
SnaBI	TACGTA	1 cut(s)	446
Sse9I	AATT	4 cut(s)	175, 345, 801, 1058
SsiI	CCGC	3 cut(s)	147, 459, 984
SspI	AATATT	1 cut(s)	934
SspMI	CTAG	1 cut(s)	503
SstI	GAGCTC	1 cut(s)	929
StyD4I	CCNGG	1 cut(s)	289
StyI	CCWWGG	2 cut(s)	94, 1094
TaaI	ACNGT	3 cut(s)	499, 794, 835
TaiI	ACGT	4 cut(s)	448, 671, 1122, 1146
TaqI	TCGA	3 cut(s)	410, 431, 1008
TasI	AATT	4 cut(s)	175, 345, 801, 1058
TatI	WGTACW	1 cut(s)	499
TauI	GCSGC	1 cut(s)	986
TfiI	GAWTC	1 cut(s)	554
Tru1I	TTAA	4 cut(s)	237, 312, 560, 846
Tru9I	TTAA	4 cut(s)	237, 312, 560, 846
TscAI	CASTG	4 cut(s)	253, 799, 838, 981
TseFI	GTSAC	2 cut(s)	895, 969
TseI	GCWGC	4 cut(s)	278, 419, 422, 743
Tsp45I	GTSAC	2 cut(s)	895, 969
TspDTI	ATGAA	7 cut(s)	383, 479, 651, 795, 1014, 1071, 1089
TspRI	CASTG	4 cut(s)	253, 799, 838, 981
VpaK11BI	GGWCC	1 cut(s)	772
XapI	RAATTY	1 cut(s)	345
XcmI	CCANNNNNNNNNTGG	1 cut(s)	598
XmiI	GTMKAC	1 cut(s)	789
XspI	CTAG	1 cut(s)	503
ZraI	GACGTC	2 cut(s)	1120, 1144
ZrmI	AGTACT	1 cut(s)	501

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.