Rh4BG314400

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Forward (+)
48166551 .. 48167287
737 bp
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UTR
Exon/CDS
Intron
Rh4BG314400.1

Sequence Viewer

Length: 216 bp
ATGAATGGTTCCGTTCTTGATTGGTTGATTGGAAGTACAAATTTGAGTGAAGAGAGCTGGGATGACTCGCTAGGTATGGCAGCTCACTTGTTTCTAAGAGGAAAAGTTAAGAGATGGAGCTTACATGAAGAAGACTGGTGTGCAGAAGTATGGCAAAGGCAATTGGAAGTTTATCTTAAATACATACAGAGAGTCAGAGATGTGAGATGTATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

71

Amino Acids

8.47

Weight (kDa)

5.56

Isoelectric Point (pI)

39.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018186)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 40
AfaI GTAC 1 cut(s) 37
AluBI AGCT 3 cut(s) 57, 83, 120
AluI AGCT 3 cut(s) 57, 83, 120
ApeKI GCWGC 1 cut(s) 80
ApoI RAATTY 1 cut(s) 40
BbsI GAAGAC 1 cut(s) 138
BbvI GCAGC 1 cut(s) 92
BccI CCATC 1 cut(s) 108
BfaI CTAG 1 cut(s) 71
BisI GCNGC 1 cut(s) 81
BlsI GCNGC 1 cut(s) 82
BmiI GGNNCC 1 cut(s) 10
BpiI GAAGAC 1 cut(s) 138
Bse1I ACTGG 1 cut(s) 140
BseGI GGATG 1 cut(s) 67
BseNI ACTGG 1 cut(s) 140
BseXI GCAGC 1 cut(s) 92
BseYI CCCAGC 1 cut(s) 57
BsgI GTGCAG 1 cut(s) 162
BspLI GGNNCC 1 cut(s) 10
BsrI ACTGG 1 cut(s) 140
Bst6I CTCTTC 1 cut(s) 45
BstDEI CTNAG 1 cut(s) 95
BstF5I GGATG 1 cut(s) 67
BstV1I GCAGC 1 cut(s) 92
BstV2I GAAGAC 1 cut(s) 138
BtsCI GGATG 1 cut(s) 67
Csp6I GTAC 1 cut(s) 36
CviAII CATG 1 cut(s) 125
CviJI RGCY 3 cut(s) 57, 83, 120
CviKI_1 RGCY 3 cut(s) 57, 83, 120
CviQI GTAC 1 cut(s) 36
DdeI CTNAG 1 cut(s) 95
Eam1104I CTCTTC 1 cut(s) 45
EarI CTCTTC 1 cut(s) 45
FaeI CATG 1 cut(s) 128
FaiI YATR 4 cut(s) 77, 126, 151, 185
FalI AAGNNNNNCTT 2 cut(s) 159, 191
FatI CATG 1 cut(s) 124
Fnu4HI GCNGC 1 cut(s) 81
FokI GGATG 1 cut(s) 74
Fsp4HI GCNGC 1 cut(s) 81
FspBI CTAG 1 cut(s) 71
GluI GCNGC 1 cut(s) 81
GsaI CCCAGC 1 cut(s) 61
Hin1II CATG 1 cut(s) 128
HinfI GANTC 2 cut(s) 65, 192
Hpy188I TCNGA 1 cut(s) 197
Hpy188III TCNNGA 1 cut(s) 17
HpyCH4V TGCA 1 cut(s) 143
HpyF3I CTNAG 1 cut(s) 95
Hsp92II CATG 1 cut(s) 128
LmnI GCTCC 1 cut(s) 117
LpnPI CCDG 2 cut(s) 43, 121
Lsp1109I GCAGC 1 cut(s) 92
MaeI CTAG 1 cut(s) 71
MboII GAAGA 3 cut(s) 62, 140, 143
MfeI CAATTG 1 cut(s) 161
MluCI AATT 2 cut(s) 40, 161
MlyI GAGTC 2 cut(s) 59, 201
MnlI CCTC 1 cut(s) 92
MseI TTAA 2 cut(s) 108, 177
MunI CAATTG 1 cut(s) 161
NlaIII CATG 1 cut(s) 128
NlaIV GGNNCC 1 cut(s) 10
PkrI GCNGC 1 cut(s) 82
PleI GAGTC 2 cut(s) 59, 200
PpsI GAGTC 2 cut(s) 59, 200
PspFI CCCAGC 1 cut(s) 57
PspN4I GGNNCC 1 cut(s) 10
RsaI GTAC 1 cut(s) 37
RsaNI GTAC 1 cut(s) 36
SaqAI TTAA 2 cut(s) 108, 177
SatI GCNGC 1 cut(s) 81
SchI GAGTC 2 cut(s) 59, 201
SetI ASST 4 cut(s) 59, 76, 85, 122
SgeI CNNG 7 cut(s) 29, 70, 79, 83, 100, 137, 148
Sse9I AATT 2 cut(s) 40, 161
SspMI CTAG 1 cut(s) 71
TasI AATT 2 cut(s) 40, 161
TatI WGTACW 1 cut(s) 35
Tru1I TTAA 2 cut(s) 108, 177
Tru9I TTAA 2 cut(s) 108, 177
TseI GCWGC 1 cut(s) 80
TspDTI ATGAA 2 cut(s) 17, 141
XapI RAATTY 1 cut(s) 40
XspI CTAG 1 cut(s) 71
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.