Rh4BG394900

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0016044
Physical Location & Seq
Forward (+)
54599825 .. 54601447
1623 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG394900.1

Sequence Viewer

Length: 1623 bp
ATGGGTCTCTCTAGATTTTTCAAGCTTTTACCAAAACTATCCAAAAATCCCTTCTTTCTTTTCCCAAATCCTCAAACTGGTTCTCCCAGATCAGTGAGATCACTCACAAACCTTACTAGTAATCCAAAACCCTATGTTGAACACCCATCTGGGCTCTTAAGCAATCCCAAACCTGGTATTTACAGAGCAATCCATGGCACTCTATACAAAACCCAAGTGCTTGATGAGGCCAATACCCACGATATCACCCAAGAGGCTGAGAAAATCAGCAAAATTCTATCCACGGCCAACTCCAATCCTCGCATTGAGAGCTTGCTCGACGGCGCTTCAGTCAAGGTGTCGCCAACGCTTGTGGTTGAGGTCTTGAAGAAGCTCAACAACGCCGGCGCTCTGGCGCTCTCCTTTTTCCGGTGGGCCGAAAAGCAAAAGAGGTTTAAGCATTGCACAGAGAGCTACAATGCATTGATTGAAGCTCTGGGTAAGATCAAACAGTTCAAGATAATATGGGAATTGGTGAATGACATGAACAACAAAGGCCTGCTCAGCAAAGAGACTTTCGCTTTGATTTCGAGGCGGTATGCGAGGGCAAGGAAGGTTTCAGAGGCCATTAAAGCTTTTGAGAAGATGGAGAAGTTTGGGATCAAGTTAGAAGGGTCGGATTTCAATAGACTGATTGATACTCTGAGCAAGTCGAGGCAGGTTGAGAAAGCACAGGAGGTGTTCGATGAAATGAAGCACAGAAGGTTCAAACCTGATATTAAGTCGTACACTATTTTGCTGGAAGGATGGGGTCAGCAACAGAATTTTTTGAGGTTGGATGAGGTTTATAGAGAAATGAAGGCTGAAGGGTTCGATCCAGATGTTGTGACTTATGGTATTTTGATCAATGCACATTGTAAGGGGAAGAAGTATAACGAAGCAATTGGATTGGTTTGTGAGATGGAAGCGAAGAATGTTAGGCCTTCCCCTCATATCTTCTGTATGCTGATTAATGGGTTAGGTTCAGAGAAGAGGTTGGCTGAAGCTCTTGAGTTTTTCGAACGATATAAAGCCAGTGGTCTAGAACCGGAGGCACCTACTTATAATGCTGTTGTTGGAGCTTACTGCTGGTCTATGCGGATGCCTGATGCGTTTGGGGTGGTGGATGAGATGAGAAAATGTGGGATTGGCCCTAATTCTCGAACCTATGATATAATCTTGCATCACTTGGTAAAGCATCGAAGAACTGAACAAGCTTTCTCGGTATTCCAGAAAATCAGTAGCGAGCCTGGCTGCGAACCAACAGTAAGTACATATGAAATCCTAGTGAGGATGTTTTGCAACGAGAATCGAGTGGATATGGCATTACGGGTTTGGGATGAGATGAAGACTAAAGGCGTCCTGCCAGGAATGCACATGTTCTCCACATTGATCAACAGCTTGTGCCATGAGAACAAGTTAGATGACGCGTGCAGGTACTTTCAGGAGATGCTAGACGTGGGTATTCGGCCTCCAACACAGTTGTTTAGTAACCTAAAGCAAGCCCTTCTTGATGATGGGAGAAAGGATGCTGTTGTAAGTTTCGGTTTGAAGATTGACAAACTGAGAAAAACCCCATTAGTTGGGTTGCGCCAAGAACAATGA

Protein Analysis

540

Amino Acids

61.56

Weight (kDa)

9.22

Isoelectric Point (pI)

33.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_long PF17177 194 - 322 2.7e-09 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 206 - 264 6e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 221 - 262 2.6e-11 PPR repeat family
PPR_3 PF13812 241 - 298 6.3e-09 Pentatricopeptide repeat domain
PPR_2 PF13041 273 - 300 2.3e-07 PPR repeat family
PPR_3 PF13812 275 - 334 1.1e-06 Pentatricopeptide repeat domain
PPR_1 PF12854 283 - 315 3e-09 PPR repeat
PPR_2 PF13041 286 - 333 4.4e-11 PPR repeat family
PPR PF01535 289 - 319 1e-05 PPR repeat
PPR_long PF17177 314 - 421 9e-09 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 359 - 405 1e-10 PPR repeat family
PPR_3 PF13812 380 - 441 6.2e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 395 - 441 1e-08 PPR repeat family
PPR_long PF17177 411 - 520 2.5e-06 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 424 - 456 1.2e-09 PPR repeat
PPR_2 PF13041 435 - 476 3.4e-09 PPR repeat family
PPR_1 PF12854 458 - 490 6.2e-07 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G71060
fragaria_vesca FvH4_4g32230
malus_domestica MD13G1027000.v1.1 MD16G1030100.v1.1
prunus_persica Prupe.1G322900_v2.0.a1
pyrus_communis pycom13g02570
rosa_chinensis RchiOBHm_Chr4g0440971
rosa_laevigata RLG00000006135
rosa_multiflora Rmu_sc0000424.1_g000028
rosa_roxburghii Rroxscaffold_5G00381830
rosa_rugosa Rorug04G0329800
rosa_samantha Rh4BG394900 Rh4CG409800 Rh4DG388100
rosa_wichuraiana Rw4G032870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1083
Acc36I ACCTGC 2 cut(s) 688, 1443
AccB1I GGYRCC 1 cut(s) 1072
AccB7I CCANNNNNTGG 1 cut(s) 1601
AccII CGCG 1 cut(s) 1448
AciI CCGC 2 cut(s) 574, 1117
AclWI GGATC 2 cut(s) 647, 848
AcoI YGGCCR 1 cut(s) 285
AcsI RAATTY 2 cut(s) 273, 802
AcuI CTGAAG 3 cut(s) 312, 864, 1041
AcyI GRCGYC 1 cut(s) 1377
AfaI GTAC 3 cut(s) 767, 1291, 1457
AfiI CCNNNNNNNGG 4 cut(s) 77, 173, 408, 1601
AflII CTTAAG 1 cut(s) 157
AflIII ACRYGT 2 cut(s) 1395, 1446
AgsI TTSAA 8 cut(s) 22, 140, 367, 470, 496, 664, 748, 1570
AhlI ACTAGT 1 cut(s) 116
AjiI CACGTC 1 cut(s) 1477
AjnI CCWGG 3 cut(s) 172, 1267, 1384
AjuI GAANNNNNNNTTGG 2 cut(s) 35, 67
Alw26I GTCTC 2 cut(s) 11, 545
AlwI GGATC 2 cut(s) 647, 848
AoxI GGCC 8 cut(s) 228, 285, 414, 535, 603, 959, 1168, 1487
ApeKI GCWGC 1 cut(s) 1272
ApoI RAATTY 2 cut(s) 273, 802
ArsI GACNNNNNNTTYG 2 cut(s) 544, 576
AseI ATTAAT 1 cut(s) 990
AspLEI GCGC 4 cut(s) 326, 389, 397, 1611
AspS9I GGNCC 2 cut(s) 414, 1169
AsuHPI GGTGA 2 cut(s) 238, 526
AsuII TTCGAA 1 cut(s) 1038
BanI GGYRCC 1 cut(s) 1072
BanII GRGCYC 1 cut(s) 156
BbsI GAAGAC 1 cut(s) 1373
BbvI GCAGC 1 cut(s) 1259
BccI CCATC 5 cut(s) 154, 619, 780, 934, 1529
BceAI ACGGC 2 cut(s) 300, 337
BciT130I CCWGG 3 cut(s) 174, 1269, 1386
BclI TGATCA 2 cut(s) 882, 1410
BcoDI GTCTC 2 cut(s) 11, 545
BcuI ACTAGT 1 cut(s) 116
BfaI CTAG 5 cut(s) 12, 117, 1061, 1304, 1472
BfoI RGCGCY 3 cut(s) 327, 390, 398
BfrI CTTAAG 1 cut(s) 157
BfuAI ACCTGC 2 cut(s) 688, 1443
BisI GCNGC 1 cut(s) 1273
BlpI GCTNAGC 1 cut(s) 542
BlsI GCNGC 1 cut(s) 1274
Bme1390I CCNGG 3 cut(s) 174, 1269, 1386
BmgBI CACGTC 1 cut(s) 1477
BmgT120I GGNCC 2 cut(s) 414, 1169
BmiI GGNNCC 1 cut(s) 1074
BmrFI CCNGG 3 cut(s) 174, 1269, 1386
BmsI GCATC 6 cut(s) 1110, 1117, 1210, 1225, 1458, 1537
BpiI GAAGAC 1 cut(s) 1373
Bpu1102I GCTNAGC 1 cut(s) 542
Bpu14I TTCGAA 1 cut(s) 1038
BpuEI CTTGAG 1 cut(s) 1049
BsaHI GRCGYC 1 cut(s) 1377
BsaI GGTCTC 1 cut(s) 11
BsaJI CCNNGG 2 cut(s) 193, 282
BsaWI WCCGGW 2 cut(s) 408, 1066
BsaXI ACNNNNNCTCC 4 cut(s) 67, 97, 1385, 1415
Bsc4I CCNNNNNNNGG 4 cut(s) 77, 173, 408, 1601
Bse118I RCCGGY 1 cut(s) 383
Bse1I ACTGG 2 cut(s) 82, 1053
Bse3DI GCAATG 1 cut(s) 439
BseBI CCWGG 3 cut(s) 174, 1269, 1386
BseDI CCNNGG 2 cut(s) 193, 282
BseGI GGATG 7 cut(s) 791, 823, 1125, 1150, 1317, 1363, 1552
BseLI CCNNNNNNNGG 4 cut(s) 77, 173, 408, 1601
BseMI GCAATG 1 cut(s) 439
BseMII CTCAG 4 cut(s) 249, 556, 674, 1574
BseNI ACTGG 2 cut(s) 82, 1053
BseXI GCAGC 1 cut(s) 1259
BsgI GTGCAG 1 cut(s) 1471
Bsh1236I CGCG 1 cut(s) 1448
BshFI GGCC 8 cut(s) 230, 287, 416, 537, 605, 961, 1170, 1489
BshNI GGYRCC 1 cut(s) 1072
BsiSI CCGG 3 cut(s) 384, 409, 1067
BslI CCNNNNNNNGG 4 cut(s) 77, 173, 408, 1601
BsmAI GTCTC 2 cut(s) 11, 545
BsmI GAATGC 1 cut(s) 1395
BsnI GGCC 8 cut(s) 230, 287, 416, 537, 605, 961, 1170, 1489
Bso31I GGTCTC 1 cut(s) 11
Bsp119I TTCGAA 1 cut(s) 1038
Bsp1286I GDGCHC 1 cut(s) 156
Bsp143I GATC 7 cut(s) 89, 98, 483, 639, 853, 882, 1410
Bsp1720I GCTNAGC 1 cut(s) 542
Bsp19I CCATGG 1 cut(s) 193
BspACI CCGC 2 cut(s) 574, 1117
BspANI GGCC 8 cut(s) 230, 287, 416, 537, 605, 961, 1170, 1489
BspCNI CTCAG 4 cut(s) 250, 555, 675, 1575
BspFNI CGCG 1 cut(s) 1448
BspLI GGNNCC 1 cut(s) 1074
BspMI ACCTGC 2 cut(s) 688, 1443
BspPI GGATC 2 cut(s) 647, 848
BspT104I TTCGAA 1 cut(s) 1038
BspT107I GGYRCC 1 cut(s) 1072
BspTI CTTAAG 1 cut(s) 157
BspTNI GGTCTC 1 cut(s) 11
BsrDI GCAATG 1 cut(s) 439
BsrFI RCCGGY 1 cut(s) 383
BsrI ACTGG 2 cut(s) 82, 1053
BssAI RCCGGY 1 cut(s) 383
BssECI CCNNGG 2 cut(s) 193, 282
BssMI GATC 7 cut(s) 89, 98, 483, 639, 853, 882, 1410
BssNI GRCGYC 1 cut(s) 1377
BssT1I CCWWGG 1 cut(s) 193
Bst2UI CCWGG 3 cut(s) 174, 1269, 1386
Bst4CI ACNGT 3 cut(s) 492, 1285, 1500
Bst6I CTCTTC 1 cut(s) 1004
BstACI GRCGYC 1 cut(s) 1377
BstAFI CTTAAG 1 cut(s) 157
BstBI TTCGAA 1 cut(s) 1038
BstC8I GCNNGC 6 cut(s) 314, 385, 539, 1265, 1450, 1521
BstDEI CTNAG 4 cut(s) 258, 542, 683, 1583
BstDSI CCRYGG 2 cut(s) 193, 282
BstF5I GGATG 7 cut(s) 791, 823, 1125, 1150, 1317, 1363, 1552
BstFNI CGCG 1 cut(s) 1448
BstH2I RGCGCY 3 cut(s) 327, 390, 398
BstHHI GCGC 4 cut(s) 326, 389, 397, 1611
BstKTI GATC 7 cut(s) 92, 101, 486, 642, 856, 885, 1413
BstMAI GTCTC 2 cut(s) 11, 545
BstMBI GATC 7 cut(s) 89, 98, 483, 639, 853, 882, 1410
BstMWI GCNNNNNNNGC 6 cut(s) 309, 450, 543, 611, 1269, 1390
BstNI CCWGG 3 cut(s) 174, 1269, 1386
BstNSI RCATGY 1 cut(s) 1399
BstSCI CCNGG 3 cut(s) 172, 1267, 1384
BstUI CGCG 1 cut(s) 1448
BstV1I GCAGC 1 cut(s) 1259
BstV2I GAAGAC 1 cut(s) 1373
BsuRI GGCC 8 cut(s) 230, 287, 416, 537, 605, 961, 1170, 1489
BtgI CCRYGG 2 cut(s) 193, 282
BtrI CACGTC 1 cut(s) 1477
BtsCI GGATG 7 cut(s) 791, 823, 1125, 1150, 1317, 1363, 1552
BtsIMutI CAGTG 2 cut(s) 99, 1060
BveI ACCTGC 2 cut(s) 688, 1443
Cac8I GCNNGC 6 cut(s) 314, 385, 539, 1265, 1450, 1521
CfoI GCGC 4 cut(s) 326, 389, 397, 1611
Cfr10I RCCGGY 1 cut(s) 383
Cfr13I GGNCC 2 cut(s) 414, 1169
CseI GACGC 2 cut(s) 1366, 1454
CsiI ACCWGGT 1 cut(s) 172
Csp6I GTAC 3 cut(s) 766, 1290, 1456
CspCI CAANNNNNGTGG 2 cut(s) 333, 368
CviAII CATG 4 cut(s) 194, 523, 1396, 1427
CviQI GTAC 3 cut(s) 766, 1290, 1456
DdeI CTNAG 4 cut(s) 258, 542, 683, 1583
DpnI GATC 7 cut(s) 91, 100, 485, 641, 855, 884, 1412
DpnII GATC 7 cut(s) 89, 98, 483, 639, 853, 882, 1410
EaeI YGGCCR 1 cut(s) 285
Eam1104I CTCTTC 1 cut(s) 1004
EarI CTCTTC 1 cut(s) 1004
Eco130I CCWWGG 1 cut(s) 193
Eco147I AGGCCT 2 cut(s) 537, 961
Eco24I GRGCYC 1 cut(s) 156
Eco31I GGTCTC 1 cut(s) 11
Eco32I GATATC 1 cut(s) 244
Eco57I CTGAAG 3 cut(s) 312, 864, 1041
EcoRII CCWGG 3 cut(s) 172, 1267, 1384
EcoRV GATATC 1 cut(s) 244
EcoT14I CCWWGG 1 cut(s) 193
EcoT22I ATGCAT 1 cut(s) 463
EcoT38I GRGCYC 1 cut(s) 156
ErhI CCWWGG 1 cut(s) 193
FaeI CATG 4 cut(s) 197, 526, 1399, 1430
FalI AAGNNNNNCTT 2 cut(s) 1512, 1544
FatI CATG 4 cut(s) 193, 522, 1395, 1426
FauNDI CATATG 1 cut(s) 1294
FbaI TGATCA 2 cut(s) 882, 1410
Fnu4HI GCNGC 1 cut(s) 1273
FokI GGATG 7 cut(s) 798, 830, 1132, 1157, 1324, 1370, 1559
FriOI GRGCYC 1 cut(s) 156
Fsp4HI GCNGC 1 cut(s) 1273
FspBI CTAG 5 cut(s) 12, 117, 1061, 1304, 1472
GlaI GCGC 4 cut(s) 325, 388, 396, 1610
GluI GCNGC 1 cut(s) 1273
HaeII RGCGCY 3 cut(s) 327, 390, 398
HaeIII GGCC 8 cut(s) 230, 287, 416, 537, 605, 961, 1170, 1489
HapII CCGG 3 cut(s) 384, 409, 1067
HgaI GACGC 2 cut(s) 1366, 1454
HhaI GCGC 4 cut(s) 326, 389, 397, 1611
Hin1I GRCGYC 1 cut(s) 1377
Hin1II CATG 4 cut(s) 197, 526, 1399, 1430
Hin6I GCGC 4 cut(s) 324, 387, 395, 1609
HinP1I GCGC 4 cut(s) 324, 387, 395, 1609
HindIII AAGCTT 3 cut(s) 23, 612, 1233
HinfI GANTC 1 cut(s) 1327
HpaII CCGG 3 cut(s) 384, 409, 1067
HphI GGTGA 2 cut(s) 238, 526
Hpy166II GTNNAC 1 cut(s) 768
Hpy188I TCNGA 4 cut(s) 601, 658, 684, 1006
Hpy8I GTNNAC 1 cut(s) 768
Hpy99I CGWCG 1 cut(s) 323
HpyAV CCTTC 9 cut(s) 61, 586, 644, 735, 776, 832, 839, 972, 1535
HpyCH4III ACNGT 3 cut(s) 492, 1285, 1500
HpyCH4IV ACGT 1 cut(s) 1476
HpyCH4V TGCA 7 cut(s) 444, 461, 890, 1201, 1320, 1393, 1452
HpyF10VI GCNNNNNNNGC 6 cut(s) 309, 450, 543, 611, 1269, 1390
HpyF3I CTNAG 4 cut(s) 258, 542, 683, 1583
HpySE526I ACGT 1 cut(s) 1476
Hsp92I GRCGYC 1 cut(s) 1377
Hsp92II CATG 4 cut(s) 197, 526, 1399, 1430
HspAI GCGC 4 cut(s) 324, 387, 395, 1609
KroI GCCGGC 1 cut(s) 383
KroNI GCCGGC 1 cut(s) 385
Ksp22I TGATCA 2 cut(s) 882, 1410
Kzo9I GATC 7 cut(s) 89, 98, 483, 639, 853, 882, 1410
LmnI GCTCC 1 cut(s) 1097
Lsp1109I GCAGC 1 cut(s) 1259
LweI GCATC 6 cut(s) 1110, 1117, 1210, 1225, 1458, 1537
MabI ACCWGGT 1 cut(s) 172
MaeI CTAG 5 cut(s) 12, 117, 1061, 1304, 1472
MaeII ACGT 1 cut(s) 1476
MaeIII GTNAC 2 cut(s) 865, 1508
MalI GATC 7 cut(s) 91, 100, 485, 641, 855, 884, 1412
MboI GATC 7 cut(s) 89, 98, 483, 639, 853, 882, 1410
MboII GAAGA 9 cut(s) 379, 634, 916, 961, 967, 1021, 1233, 1378, 1582
MfeI CAATTG 1 cut(s) 921
MhlI GDGCHC 1 cut(s) 156
MluCI AATT 5 cut(s) 273, 509, 802, 921, 1174
MluI ACGCGT 1 cut(s) 1446
MmeI TCCRAC 4 cut(s) 636, 795, 1075, 1517
Mph1103I ATGCAT 1 cut(s) 463
MreI CGCCGGCG 1 cut(s) 383
MroNI GCCGGC 1 cut(s) 383
MseI TTAA 5 cut(s) 158, 435, 609, 759, 990
MspCI CTTAAG 1 cut(s) 157
MspI CCGG 3 cut(s) 384, 409, 1067
MspR9I CCNGG 3 cut(s) 174, 1269, 1386
MunI CAATTG 1 cut(s) 921
Mva1269I GAATGC 1 cut(s) 1395
MvaI CCWGG 3 cut(s) 174, 1269, 1386
MvnI CGCG 1 cut(s) 1448
MwoI GCNNNNNNNGC 6 cut(s) 309, 450, 543, 611, 1269, 1390
NaeI GCCGGC 1 cut(s) 385
NcoI CCATGG 1 cut(s) 193
NdeI CATATG 1 cut(s) 1294
NdeII GATC 7 cut(s) 89, 98, 483, 639, 853, 882, 1410
NgoMIV GCCGGC 1 cut(s) 383
NlaIII CATG 4 cut(s) 197, 526, 1399, 1430
NlaIV GGNNCC 1 cut(s) 1074
NmuCI GTSAC 1 cut(s) 865
NsiI ATGCAT 1 cut(s) 463
NspI RCATGY 1 cut(s) 1399
NspV TTCGAA 1 cut(s) 1038
PceI AGGCCT 2 cut(s) 537, 961
PciI ACATGT 1 cut(s) 1395
PctI GAATGC 1 cut(s) 1395
PdiI GCCGGC 1 cut(s) 385
PfeI GAWTC 1 cut(s) 1327
PflMI CCANNNNNTGG 1 cut(s) 1601
PkrI GCNGC 1 cut(s) 1274
PscI ACATGT 1 cut(s) 1395
PshBI ATTAAT 1 cut(s) 990
PsiI TTATAA 1 cut(s) 1083
Psp6I CCWGG 3 cut(s) 172, 1267, 1384
PspGI CCWGG 3 cut(s) 172, 1267, 1384
PspN4I GGNNCC 1 cut(s) 1074
PspPI GGNCC 2 cut(s) 414, 1169
RsaI GTAC 3 cut(s) 767, 1291, 1457
RsaNI GTAC 3 cut(s) 766, 1290, 1456
SaqAI TTAA 5 cut(s) 158, 435, 609, 759, 990
SatI GCNGC 1 cut(s) 1273
Sau3AI GATC 7 cut(s) 89, 98, 483, 639, 853, 882, 1410
Sau96I GGNCC 2 cut(s) 414, 1169
ScrFI CCNGG 3 cut(s) 174, 1269, 1386
SduI GDGCHC 1 cut(s) 156
SexAI ACCWGGT 1 cut(s) 172
SfaNI GCATC 6 cut(s) 1110, 1117, 1210, 1225, 1458, 1537
SfuI TTCGAA 1 cut(s) 1038
SgrAI CRCCGGYG 1 cut(s) 383
SmlI CTYRAG 2 cut(s) 157, 1028
SmoI CTYRAG 2 cut(s) 157, 1028
SpeI ACTAGT 1 cut(s) 116
Sse9I AATT 5 cut(s) 273, 509, 802, 921, 1174
SseBI AGGCCT 2 cut(s) 537, 961
SsiI CCGC 2 cut(s) 574, 1117
SspMI CTAG 5 cut(s) 12, 117, 1061, 1304, 1472
StuI AGGCCT 2 cut(s) 537, 961
StyD4I CCNGG 3 cut(s) 172, 1267, 1384
StyI CCWWGG 1 cut(s) 193
TaaI ACNGT 3 cut(s) 492, 1285, 1500
TaiI ACGT 1 cut(s) 1479
TaqI TCGA 9 cut(s) 318, 569, 692, 723, 852, 1038, 1180, 1219, 1330
TasI AATT 5 cut(s) 273, 509, 802, 921, 1174
TatI WGTACW 1 cut(s) 1289
TfiI GAWTC 1 cut(s) 1327
Tru1I TTAA 5 cut(s) 158, 435, 609, 759, 990
Tru9I TTAA 5 cut(s) 158, 435, 609, 759, 990
TscAI CASTG 2 cut(s) 99, 1060
TseFI GTSAC 1 cut(s) 865
TseI GCWGC 1 cut(s) 1272
Tsp45I GTSAC 1 cut(s) 865
TspDTI ATGAA 6 cut(s) 539, 741, 746, 851, 1311, 1379
TspRI CASTG 2 cut(s) 99, 1060
Van91I CCANNNNNTGG 1 cut(s) 1601
Vha464I CTTAAG 1 cut(s) 157
VspI ATTAAT 1 cut(s) 990
XapI RAATTY 2 cut(s) 273, 802
XbaI TCTAGA 2 cut(s) 11, 1060
XceI RCATGY 1 cut(s) 1399
XspI CTAG 5 cut(s) 12, 117, 1061, 1304, 1472
Zsp2I ATGCAT 1 cut(s) 463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.