Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0006475

Physical Location & Seq

Genomic Coordinates Reverse (-)

58872507 .. 58880141

Gene Structure 7635 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG327900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1962 bp

ATGGCGGCTGGAAGACATGGGGGTTATCGCGAAAACGAGTTCAGGGAGCGAGAGTCCAGTTTCGAATTGCCGCGGAGGGATTTAGCTTCTGCCAAGGAGGACTTGGAGCGGATCGGGAATGGGAATCGTGATGTTCACAAGGGCCGCGTTCGGGATTTGAGAGATAGAATCAGGGCTAGGTCCAAGGAGAGGGCAGTGGCTAATGGTGGATACCGATCCTCTTCGAGTAGGAGTGATTCCGGCAGCAGTGGCGGTGGTGGTGGGCTAGTAGTAGCCGGTCGCGGGCCTAAGCCGTGTGGGTTTTCTGCCAAGGCATTGGATAGGGAACCTGGTGAATTGTCAAGTGAGAGCGGGTCTGATGATGCTATTGAATCCGGGTCGCAGGGCAGAGATGTAGAGGTTATGAAGGTGGTGGAGAATGGAAGTCAGACTCCCAAGGAGAGGAAAAGGAAGTTTTCGCCTATTGTGTGGGATAGAGATGATAAAGAAGGGAGTAATTCGTCCAGGACTAGGATTACAACAGTGGCAACAGCTCTTCCTCCTCCACCCCCACTGGCTAGGGTGTCTCGTCAGTCTCCTAATGTTACTTCAGATAGCAGGGTACAAATATCTTCAGCTAAAATTGATGAAGCCGACAATTTACAACCTTCCTTTCCGGTTAAGTCGTCTCCTGTGGCACCTGAGACTGTTAGCAATGGTGTATATGAGTCTCCGGTAGAGTTGTCTTCACCAGATCAGCATTTAGGGGATGTTCGTGAAGCAGAGCAGCTAGAAGATGAAGATTATGTTCCAACCCGAAATATATCATCTTCAAGATGGGCAGCAGGAAATAATTCTCCTGGTGATGAAGGTGGAATTTCAGAAAACGAGGAAATTCCTAAAAGGAGGAGGAAAATGCCTCGTTTAGGATCAGTGGAAAACAGAGTACGCAACAGCTCATTGACTCCGGAGCTAGGGGAGCTTAAGAAAGATGGGTCTGAACGAGGTAGGGCGAGATCATCCGAGTCTGATGAACGAGATGCCCTTCGAAGGTCTAGTGGGGATGACTATCCTGATAATGACTCAGAGAGGGATGACTACATGGATGTTGACAAGGATAATGGTAATAATTATAGTGTTAGTCGTTATGATACTAGTTCAGAGGATGAGCATGATTCTCCTGAGACACCAGAGCCTGCAGCTCCTCCACAAAGAAGTGTAAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTCGAGAGACTAAACAAGATAGATGAGGGCACTTATGGTGTTGTATATCGGGCCCAAGATAAGAAAACTGGTGAAATTGTGGCATTGAAGAAGGTAAAGATGGAGAAGGAAAGAGAAGGTTTTCCGTTAACTTCTCTGAGGGAAATAAACATTCTCCTTTCTTTTCATCATCCATCAATTGTCGATGTTAAGGAAGTAGTGGTGGGCAGTAACCTTGATAGCATTTTTATGGTGATGGAATACATGGAGCATGATCTTAAAGCACTCATGGAGACAATGAAGCAGCCATTTAGTCCGAGTGAAGTCAAATGCCTTATGCTCCAGCTATTGGAAGGTGTCAAATATCTTCATGATAATTGGGTGCTTCATCGGGATTTGAAGACATCTAACCTGCTTTTGAATAATCGGGGTGAGTTGAAGATCTGTGACTTTGGGTTGGCTCGTCAATATGGAAGTCCTTTGAAACCGTATACTCATTTGGTGGTTACTCTTTGGTACAGGGCGCCGGAACTTCTGTTGGGAGCAAGAGAATATTCAACGGCAATCGATATGTGGTCACTAGGTTGTATCATGGCTGAGCTGTTATCAAAGGAGCCGCTTTTTAATGGGAAAACTGAATTTGAACAACTTGACAAAATTTTTAAGATACTTGGCACACCAAATGAGACTATTTGGCCTGGGTTTTCCAAGCTTCCTGGAGTAAAGGTCAACTTTGTTAAGCATCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007346 GO:0008150 GO:0008152 GO:0009987 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0060255 GO:0065007 GO:0071704 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

653

Amino Acids

72.85

Weight (kDa)

5.6

Isoelectric Point (pI)

52.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	412 - 641	3.5e-64	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	415 - 610	8.4e-35	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006475)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67580 AT1G67580
fragaria_vesca	FvH4_4g24200
malus_domestica	MD13G1113400.v1.1 MD16G1112700.v1.1
prunus_persica	Prupe.1G232700_v2.0.a1 Prupe.1G232700_v2.0.a1 Prupe.1G232700_v2.0.a1 Prupe.1G232700_v2.0.a1 Prupe.1G232700_v2.0.a1 Prupe.1G232700_v2.0.a1
pyrus_communis	pycom13g09880 pycom16g09530
rosa_chinensis	RchiOBHm_Chr4g0431041
rosa_laevigata	RLG00000006930
rosa_multiflora	Rmu_co8378327.1_g000001
rosa_roxburghii	Rroxscaffold_5G00372660
rosa_rugosa	Rorug04G0247500 Rorug04G0247600 Rorug04G0247700.1 Rorug04G0247800
rosa_samantha	Rh4AG304400 Rh4BG311600 Rh4CG327900 Rh4DG308100
rosa_wichuraiana	Rw4G026430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1632
AccB1I	GGYRCC	2 cut(s)	676, 1735
AccB7I	CCANNNNNTGG	1 cut(s)	1561
AccBSI	CCGCTC	2 cut(s)	109, 351
AccI	GTMKAC	1 cut(s)	1703
AccII	CGCG	4 cut(s)	30, 73, 147, 282
AccIII	TCCGGA	1 cut(s)	946
AciI	CCGC	9 cut(s)	5, 71, 73, 109, 145, 252, 282, 351, 1829
AclWI	GGATC	3 cut(s)	119, 210, 916
AcsI	RAATTY	4 cut(s)	855, 873, 1850, 1869
AcuI	CTGAAG	3 cut(s)	573, 597, 1193
AcyI	GRCGYC	1 cut(s)	1736
AfaI	GTAC	3 cut(s)	603, 927, 1730
AfiI	CCNNNNNNNGG	9 cut(s)	151, 189, 282, 441, 510, 905, 953, 1029, 1561
AflII	CTTAAG	1 cut(s)	962
AgsI	TTSAA	9 cut(s)	371, 813, 1321, 1612, 1633, 1651, 1696, 1770, 1856
AhlI	ACTAGT	1 cut(s)	1133
AjnI	CCWGG	5 cut(s)	328, 503, 838, 1909, 1927
Alw26I	GTCTC	9 cut(s)	570, 579, 672, 677, 714, 1157, 1234, 1499, 1892
AlwI	GGATC	3 cut(s)	119, 210, 916
AlwNI	CAGNNNCTG	1 cut(s)	1175
Aor13HI	TCCGGA	1 cut(s)	946
AoxI	GGCC	4 cut(s)	142, 284, 1284, 1907
ApaI	GGGCCC	1 cut(s)	1288
ApeKI	GCWGC	5 cut(s)	243, 766, 821, 1178, 1516
ApoI	RAATTY	4 cut(s)	855, 873, 1850, 1869
Asp700I	GAANNNNTTC	2 cut(s)	832, 1353
AspLEI	GCGC	1 cut(s)	1738
AspS9I	GGNCC	5 cut(s)	142, 180, 284, 1284, 1285
AsuC2I	CCSGG	1 cut(s)	376
AsuHPI	GGTGA	6 cut(s)	344, 720, 854, 1316, 1477, 1655
AsuII	TTCGAA	2 cut(s)	63, 1027
AvaII	GGWCC	1 cut(s)	180
BaeGI	GKGCMC	2 cut(s)	1265, 1288
BanI	GGYRCC	2 cut(s)	676, 1735
BanII	GRGCYC	1 cut(s)	1288
BarI	GAAGNNNNNNTAC	2 cut(s)	1191, 1223
BbsI	GAAGAC	3 cut(s)	19, 717, 1619
BbvI	GCAGC	5 cut(s)	255, 778, 833, 1190, 1528
BccI	CCATC	5 cut(s)	810, 965, 1327, 1414, 1462
BceAI	ACGGC	2 cut(s)	277, 1788
BciT130I	CCWGG	5 cut(s)	330, 505, 840, 1911, 1929
BciVI	GTATCC	1 cut(s)	203
BcnI	CCSGG	1 cut(s)	376
BcoDI	GTCTC	9 cut(s)	570, 579, 672, 677, 714, 1157, 1234, 1499, 1892
BcuI	ACTAGT	1 cut(s)	1133
BfaI	CTAG	9 cut(s)	177, 266, 510, 558, 770, 953, 1035, 1134, 1793
BfmI	CTRYAG	1 cut(s)	1176
BfoI	RGCGCY	1 cut(s)	1739
BfrI	CTTAAG	1 cut(s)	962
BfuAI	ACCTGC	1 cut(s)	1632
BfuI	GTATCC	1 cut(s)	203
BglII	AGATCT	1 cut(s)	1653
BisI	GCNGC	9 cut(s)	6, 71, 145, 244, 767, 822, 1179, 1517, 1829
BlpI	GCTNAGC	1 cut(s)	1809
BlsI	GCNGC	9 cut(s)	7, 72, 146, 245, 768, 823, 1180, 1518, 1830
Bme1390I	CCNGG	6 cut(s)	330, 376, 505, 840, 1911, 1929
Bme18I	GGWCC	1 cut(s)	180
BmgT120I	GGNCC	5 cut(s)	142, 180, 284, 1284, 1285
BmiI	GGNNCC	5 cut(s)	327, 678, 1286, 1737, 1827
BmrFI	CCNGG	6 cut(s)	330, 376, 505, 840, 1911, 1929
BmsI	GCATC	2 cut(s)	352, 1009
BpiI	GAAGAC	3 cut(s)	19, 717, 1619
BpmI	CTGGAG	2 cut(s)	1538, 1950
Bpu10I	CCTNAGC	1 cut(s)	288
Bpu1102I	GCTNAGC	1 cut(s)	1809
Bpu14I	TTCGAA	2 cut(s)	63, 1027
BpuMI	CCSGG	1 cut(s)	376
Bsa29I	ATCGAT	1 cut(s)	1779
BsaBI	GATNNNNATC	2 cut(s)	214, 1047
BsaHI	GRCGYC	1 cut(s)	1736
BsaJI	CCNNGG	6 cut(s)	71, 93, 183, 309, 435, 1910
BsaWI	WCCGGW	3 cut(s)	655, 712, 946
BsaXI	ACNNNNNCTCC	4 cut(s)	38, 68, 1923, 1953
Bsc4I	CCNNNNNNNGG	9 cut(s)	151, 189, 282, 441, 510, 905, 953, 1029, 1561
Bse118I	RCCGGY	1 cut(s)	275
Bse1I	ACTGG	3 cut(s)	57, 558, 1306
Bse3DI	GCAATG	1 cut(s)	700
Bse8I	GATNNNNATC	2 cut(s)	214, 1047
BseAI	TCCGGA	1 cut(s)	946
BseBI	CCWGG	5 cut(s)	330, 505, 840, 1911, 1929
BseCI	ATCGAT	1 cut(s)	1779
BseDI	CCNNGG	6 cut(s)	71, 93, 183, 309, 435, 1910
BseGI	GGATG	7 cut(s)	754, 998, 1048, 1078, 1090, 1150, 1402
BseJI	GATNNNNATC	2 cut(s)	214, 1047
BseLI	CCNNNNNNNGG	9 cut(s)	151, 189, 282, 441, 510, 905, 953, 1029, 1561
BseMI	GCAATG	1 cut(s)	700
BseMII	CTCAG	5 cut(s)	672, 1077, 1152, 1361, 1800
BseNI	ACTGG	3 cut(s)	57, 558, 1306
BseRI	GAGGAG	3 cut(s)	531, 901, 1173
BseSI	GKGCMC	2 cut(s)	1265, 1288
BseXI	GCAGC	5 cut(s)	255, 778, 833, 1190, 1528
Bsh1236I	CGCG	4 cut(s)	30, 73, 147, 282
Bsh1285I	CGRYCG	1 cut(s)	280
BshFI	GGCC	4 cut(s)	144, 286, 1286, 1909
BshNI	GGYRCC	2 cut(s)	676, 1735
BshVI	ATCGAT	1 cut(s)	1779
BsiEI	CGRYCG	1 cut(s)	280
BsiSI	CCGG	7 cut(s)	240, 276, 375, 656, 713, 947, 1739
BslI	CCNNNNNNNGG	9 cut(s)	151, 189, 282, 441, 510, 905, 953, 1029, 1561
BsmAI	GTCTC	9 cut(s)	570, 579, 672, 677, 714, 1157, 1234, 1499, 1892
BsmBI	CGTCTC	1 cut(s)	672
BsnI	GGCC	4 cut(s)	144, 286, 1286, 1909
Bsp119I	TTCGAA	2 cut(s)	63, 1027
Bsp120I	GGGCCC	1 cut(s)	1284
Bsp1286I	GDGCHC	2 cut(s)	1265, 1288
Bsp13I	TCCGGA	1 cut(s)	946
Bsp143I	GATC	7 cut(s)	111, 215, 733, 908, 995, 1486, 1653
Bsp1720I	GCTNAGC	1 cut(s)	1809
Bsp68I	TCGCGA	1 cut(s)	30
BspACI	CCGC	9 cut(s)	5, 71, 73, 109, 145, 252, 282, 351, 1829
BspANI	GGCC	4 cut(s)	144, 286, 1286, 1909
BspCNI	CTCAG	5 cut(s)	673, 1076, 1153, 1362, 1801
BspDI	ATCGAT	1 cut(s)	1779
BspEI	TCCGGA	1 cut(s)	946
BspFNI	CGCG	4 cut(s)	30, 73, 147, 282
BspHI	TCATGA	1 cut(s)	1582
BspLI	GGNNCC	5 cut(s)	327, 678, 1286, 1737, 1827
BspMAI	CTGCAG	1 cut(s)	1180
BspMI	ACCTGC	1 cut(s)	1632
BspPI	GGATC	3 cut(s)	119, 210, 916
BspQI	GCTCTTC	1 cut(s)	540
BspT104I	TTCGAA	2 cut(s)	63, 1027
BspT107I	GGYRCC	2 cut(s)	676, 1735
BspTI	CTTAAG	1 cut(s)	962
BsrBI	CCGCTC	2 cut(s)	109, 351
BsrDI	GCAATG	1 cut(s)	700
BsrFI	RCCGGY	1 cut(s)	275
BsrI	ACTGG	3 cut(s)	57, 558, 1306
BssAI	RCCGGY	1 cut(s)	275
BssECI	CCNNGG	6 cut(s)	71, 93, 183, 309, 435, 1910
BssMI	GATC	7 cut(s)	111, 215, 733, 908, 995, 1486, 1653
BssNAI	GTATAC	1 cut(s)	1704
BssNI	GRCGYC	1 cut(s)	1736
BssT1I	CCWWGG	4 cut(s)	93, 183, 309, 435
Bst1107I	GTATAC	1 cut(s)	1704
Bst2UI	CCWGG	5 cut(s)	330, 505, 840, 1911, 1929
Bst4CI	ACNGT	3 cut(s)	523, 688, 1701
Bst6I	CTCTTC	2 cut(s)	226, 540
BstACI	GRCGYC	1 cut(s)	1736
BstAFI	CTTAAG	1 cut(s)	962
BstBI	TTCGAA	2 cut(s)	63, 1027
BstC8I	GCNNGC	2 cut(s)	284, 1176
BstDEI	CTNAG	6 cut(s)	288, 681, 1063, 1161, 1370, 1809
BstDSI	CCRYGG	1 cut(s)	71
BstENI	CCTNNNNNAGG	1 cut(s)	903
BstF5I	GGATG	7 cut(s)	754, 998, 1048, 1078, 1090, 1150, 1402
BstFNI	CGCG	4 cut(s)	30, 73, 147, 282
BstH2I	RGCGCY	1 cut(s)	1739
BstHHI	GCGC	1 cut(s)	1738
BstKTI	GATC	7 cut(s)	114, 218, 736, 911, 998, 1489, 1656
BstMAI	GTCTC	9 cut(s)	570, 579, 672, 677, 714, 1157, 1234, 1499, 1892
BstMBI	GATC	7 cut(s)	111, 215, 733, 908, 995, 1486, 1653
BstMCI	CGRYCG	1 cut(s)	280
BstMWI	GCNNNNNNNGC	2 cut(s)	249, 958
BstNI	CCWGG	5 cut(s)	330, 505, 840, 1911, 1929
BstNSI	RCATGY	1 cut(s)	1207
BstSCI	CCNGG	6 cut(s)	328, 374, 503, 838, 1909, 1927
BstSFI	CTRYAG	1 cut(s)	1176
BstSLI	GKGCMC	2 cut(s)	1265, 1288
BstUI	CGCG	4 cut(s)	30, 73, 147, 282
BstV1I	GCAGC	5 cut(s)	255, 778, 833, 1190, 1528
BstV2I	GAAGAC	3 cut(s)	19, 717, 1619
BstX2I	RGATCY	1 cut(s)	1653
BstXI	CCANNNNNNTGG	1 cut(s)	316
BstYI	RGATCY	1 cut(s)	1653
BstZ17I	GTATAC	1 cut(s)	1704
Bsu15I	ATCGAT	1 cut(s)	1779
BsuI	GTATCC	1 cut(s)	203
BsuRI	GGCC	4 cut(s)	144, 286, 1286, 1909
BsuTUI	ATCGAT	1 cut(s)	1779
BtgI	CCRYGG	1 cut(s)	71
BtsCI	GGATG	7 cut(s)	754, 998, 1048, 1078, 1090, 1150, 1402
BtsI	GCAGTG	2 cut(s)	201, 253
BtsIMutI	CAGTG	5 cut(s)	201, 253, 528, 551, 918
BtuMI	TCGCGA	1 cut(s)	30
BveI	ACCTGC	1 cut(s)	1632
Cac8I	GCNNGC	2 cut(s)	284, 1176
CaiI	CAGNNNCTG	1 cut(s)	1175
CciI	TCATGA	1 cut(s)	1582
CfoI	GCGC	1 cut(s)	1738
Cfr10I	RCCGGY	1 cut(s)	275
Cfr13I	GGNCC	5 cut(s)	142, 180, 284, 1284, 1285
Cfr42I	CCGCGG	1 cut(s)	74
ClaI	ATCGAT	1 cut(s)	1779
CsiI	ACCWGGT	1 cut(s)	328
Csp6I	GTAC	3 cut(s)	602, 926, 1729
CviAII	CATG	9 cut(s)	17, 1081, 1151, 1204, 1477, 1484, 1501, 1583, 1804
CviQI	GTAC	3 cut(s)	602, 926, 1729
DdeI	CTNAG	6 cut(s)	288, 681, 1063, 1161, 1370, 1809
DinI	GGCGCC	1 cut(s)	1737
DpnI	GATC	7 cut(s)	113, 217, 735, 910, 997, 1488, 1655
DpnII	GATC	7 cut(s)	111, 215, 733, 908, 995, 1486, 1653
Eam1104I	CTCTTC	2 cut(s)	226, 540
EarI	CTCTTC	2 cut(s)	226, 540
Eco130I	CCWWGG	4 cut(s)	93, 183, 309, 435
Eco24I	GRGCYC	1 cut(s)	1288
Eco47I	GGWCC	1 cut(s)	180
Eco57I	CTGAAG	3 cut(s)	573, 597, 1193
EcoNI	CCTNNNNNAGG	1 cut(s)	903
EcoRII	CCWGG	5 cut(s)	328, 503, 838, 1909, 1927
EcoT14I	CCWWGG	4 cut(s)	93, 183, 309, 435
EcoT38I	GRGCYC	1 cut(s)	1288
EgeI	GGCGCC	1 cut(s)	1737
EheI	GGCGCC	1 cut(s)	1737
ErhI	CCWWGG	4 cut(s)	93, 183, 309, 435
Esp3I	CGTCTC	1 cut(s)	672
FaeI	CATG	9 cut(s)	20, 1084, 1154, 1207, 1480, 1487, 1504, 1586, 1807
FalI	AAGNNNNNCTT	4 cut(s)	86, 118, 1928, 1960
FatI	CATG	9 cut(s)	16, 1080, 1150, 1203, 1476, 1483, 1500, 1582, 1803
FauI	CCCGC	2 cut(s)	275, 344
FblI	GTMKAC	1 cut(s)	1703
Fnu4HI	GCNGC	9 cut(s)	6, 71, 145, 244, 767, 822, 1179, 1517, 1829
FokI	GGATG	7 cut(s)	761, 985, 1055, 1085, 1097, 1157, 1389
FriOI	GRGCYC	1 cut(s)	1288
Fsp4HI	GCNGC	9 cut(s)	6, 71, 145, 244, 767, 822, 1179, 1517, 1829
FspBI	CTAG	9 cut(s)	177, 266, 510, 558, 770, 953, 1035, 1134, 1793
GlaI	GCGC	1 cut(s)	1737
GluI	GCNGC	9 cut(s)	6, 71, 145, 244, 767, 822, 1179, 1517, 1829
GsuI	CTGGAG	2 cut(s)	1538, 1950
HaeII	RGCGCY	1 cut(s)	1739
HaeIII	GGCC	4 cut(s)	144, 286, 1286, 1909
HapII	CCGG	7 cut(s)	240, 276, 375, 656, 713, 947, 1739
HhaI	GCGC	1 cut(s)	1738
Hin1I	GRCGYC	1 cut(s)	1736
Hin1II	CATG	9 cut(s)	20, 1084, 1154, 1207, 1480, 1487, 1504, 1586, 1807
Hin6I	GCGC	1 cut(s)	1736
HinP1I	GCGC	1 cut(s)	1736
HincII	GTYRAC	3 cut(s)	1090, 1362, 1942
HindII	GTYRAC	3 cut(s)	1090, 1362, 1942
HindIII	AAGCTT	1 cut(s)	1922
HpaI	GTTAAC	1 cut(s)	1362
HpaII	CCGG	7 cut(s)	240, 276, 375, 656, 713, 947, 1739
HphI	GGTGA	6 cut(s)	344, 720, 854, 1316, 1477, 1655
Hpy166II	GTNNAC	6 cut(s)	136, 1090, 1201, 1362, 1704, 1942
Hpy8I	GTNNAC	6 cut(s)	136, 1090, 1201, 1362, 1704, 1942
HpyCH4III	ACNGT	3 cut(s)	523, 688, 1701
HpyCH4V	TGCA	1 cut(s)	1178
HpyF10VI	GCNNNNNNNGC	2 cut(s)	249, 958
HpyF3I	CTNAG	6 cut(s)	288, 681, 1063, 1161, 1370, 1809
Hsp92I	GRCGYC	1 cut(s)	1736
Hsp92II	CATG	9 cut(s)	20, 1084, 1154, 1207, 1480, 1487, 1504, 1586, 1807
HspAI	GCGC	1 cut(s)	1736
KasI	GGCGCC	1 cut(s)	1735
Kpn2I	TCCGGA	1 cut(s)	946
KspAI	GTTAAC	1 cut(s)	1362
KspI	CCGCGG	1 cut(s)	74
Kzo9I	GATC	7 cut(s)	111, 215, 733, 908, 995, 1486, 1653
LguI	GCTCTTC	1 cut(s)	540
LmnI	GCTCC	9 cut(s)	46, 106, 949, 958, 1186, 1480, 1557, 1754, 1825
Lsp1109I	GCAGC	5 cut(s)	255, 778, 833, 1190, 1528
LweI	GCATC	2 cut(s)	352, 1009
MabI	ACCWGGT	1 cut(s)	328
MaeI	CTAG	9 cut(s)	177, 266, 510, 558, 770, 953, 1035, 1134, 1793
MaeIII	GTNAC	5 cut(s)	583, 1442, 1658, 1717, 1788
MalI	GATC	7 cut(s)	113, 217, 735, 910, 997, 1488, 1655
MbiI	CCGCTC	2 cut(s)	109, 351
MboI	GATC	7 cut(s)	111, 215, 733, 908, 995, 1486, 1653
MfeI	CAATTG	1 cut(s)	1410
MflI	RGATCY	1 cut(s)	1653
MhlI	GDGCHC	2 cut(s)	1265, 1288
Mly113I	GGCGCC	1 cut(s)	1736
MlyI	GAGTC	6 cut(s)	62, 424, 716, 937, 1013, 1055
MmeI	TCCRAC	1 cut(s)	815
MroI	TCCGGA	1 cut(s)	946
MroXI	GAANNNNTTC	2 cut(s)	832, 1353
MseI	TTAA	8 cut(s)	660, 963, 1361, 1422, 1491, 1836, 1875, 1950
MslI	CAYNNNNRTG	1 cut(s)	1460
MspA1I	CMGCKG	1 cut(s)	73
MspCI	CTTAAG	1 cut(s)	962
MspI	CCGG	7 cut(s)	240, 276, 375, 656, 713, 947, 1739
MspR9I	CCNGG	6 cut(s)	330, 376, 505, 840, 1911, 1929
MunI	CAATTG	1 cut(s)	1410
MvaI	CCWGG	5 cut(s)	330, 505, 840, 1911, 1929
MvnI	CGCG	4 cut(s)	30, 73, 147, 282
MwoI	GCNNNNNNNGC	2 cut(s)	249, 958
NarI	GGCGCC	1 cut(s)	1736
NciI	CCSGG	1 cut(s)	376
NdeII	GATC	7 cut(s)	111, 215, 733, 908, 995, 1486, 1653
NlaIII	CATG	9 cut(s)	20, 1084, 1154, 1207, 1480, 1487, 1504, 1586, 1807
NlaIV	GGNNCC	5 cut(s)	327, 678, 1286, 1737, 1827
NmuCI	GTSAC	2 cut(s)	1658, 1788
NruI	TCGCGA	1 cut(s)	30
NspI	RCATGY	1 cut(s)	1207
NspV	TTCGAA	2 cut(s)	63, 1027
PagI	TCATGA	1 cut(s)	1582
PciSI	GCTCTTC	1 cut(s)	540
PdmI	GAANNNNTTC	2 cut(s)	832, 1353
PfeI	GAWTC	5 cut(s)	124, 168, 236, 371, 1154
PflMI	CCANNNNNTGG	1 cut(s)	1561
PfoI	TCCNGGA	2 cut(s)	503, 1927
PkrI	GCNGC	9 cut(s)	7, 72, 146, 245, 768, 823, 1180, 1518, 1830
PleI	GAGTC	6 cut(s)	61, 424, 715, 937, 1012, 1055
PluTI	GGCGCC	1 cut(s)	1739
PpsI	GAGTC	6 cut(s)	61, 424, 715, 937, 1012, 1055
Psp6I	CCWGG	5 cut(s)	328, 503, 838, 1909, 1927
PspGI	CCWGG	5 cut(s)	328, 503, 838, 1909, 1927
PspN4I	GGNNCC	5 cut(s)	327, 678, 1286, 1737, 1827
PspOMI	GGGCCC	1 cut(s)	1284
PspPI	GGNCC	5 cut(s)	142, 180, 284, 1284, 1285
PstI	CTGCAG	1 cut(s)	1180
PstNI	CAGNNNCTG	1 cut(s)	1175
PsuI	RGATCY	1 cut(s)	1653
RruI	TCGCGA	1 cut(s)	30
RsaI	GTAC	3 cut(s)	603, 927, 1730
RsaNI	GTAC	3 cut(s)	602, 926, 1729
RseI	CAYNNNNRTG	1 cut(s)	1460
SacII	CCGCGG	1 cut(s)	74
SapI	GCTCTTC	1 cut(s)	540
SaqAI	TTAA	8 cut(s)	660, 963, 1361, 1422, 1491, 1836, 1875, 1950
SatI	GCNGC	9 cut(s)	6, 71, 145, 244, 767, 822, 1179, 1517, 1829
Sau3AI	GATC	7 cut(s)	111, 215, 733, 908, 995, 1486, 1653
Sau96I	GGNCC	5 cut(s)	142, 180, 284, 1284, 1285
SchI	GAGTC	6 cut(s)	62, 424, 716, 937, 1013, 1055
ScrFI	CCNGG	6 cut(s)	330, 376, 505, 840, 1911, 1929
SduI	GDGCHC	2 cut(s)	1265, 1288
SexAI	ACCWGGT	1 cut(s)	328
SfaNI	GCATC	2 cut(s)	352, 1009
SfcI	CTRYAG	1 cut(s)	1176
SfoI	GGCGCC	1 cut(s)	1737
Sfr303I	CCGCGG	1 cut(s)	74
SfuI	TTCGAA	2 cut(s)	63, 1027
SgrBI	CCGCGG	1 cut(s)	74
SinI	GGWCC	1 cut(s)	180
SmiMI	CAYNNNNRTG	1 cut(s)	1460
SmlI	CTYRAG	1 cut(s)	962
SmoI	CTYRAG	1 cut(s)	962
SpeI	ACTAGT	1 cut(s)	1133
SsiI	CCGC	9 cut(s)	5, 71, 73, 109, 145, 252, 282, 351, 1829
SspDI	GGCGCC	1 cut(s)	1735
SspI	AATATT	1 cut(s)	1766
SspMI	CTAG	9 cut(s)	177, 266, 510, 558, 770, 953, 1035, 1134, 1793
StyD4I	CCNGG	6 cut(s)	328, 374, 503, 838, 1909, 1927
StyI	CCWWGG	4 cut(s)	93, 183, 309, 435
TaaI	ACNGT	3 cut(s)	523, 688, 1701
TaqI	TCGA	6 cut(s)	63, 224, 1027, 1236, 1416, 1779
TauI	GCSGC	4 cut(s)	8, 73, 147, 1831
TfiI	GAWTC	5 cut(s)	124, 168, 236, 371, 1154
Tru1I	TTAA	8 cut(s)	660, 963, 1361, 1422, 1491, 1836, 1875, 1950
Tru9I	TTAA	8 cut(s)	660, 963, 1361, 1422, 1491, 1836, 1875, 1950
TscAI	CASTG	5 cut(s)	201, 253, 528, 558, 918
TseFI	GTSAC	2 cut(s)	1658, 1788
TseI	GCWGC	5 cut(s)	243, 766, 821, 1178, 1516
Tsp45I	GTSAC	2 cut(s)	1658, 1788
TspDTI	ATGAA	9 cut(s)	419, 642, 792, 861, 1026, 1388, 1526, 1571, 1589
TspGWI	ACGGA	1 cut(s)	1347
TspRI	CASTG	5 cut(s)	201, 253, 528, 558, 918
Van91I	CCANNNNNTGG	1 cut(s)	1561
Vha464I	CTTAAG	1 cut(s)	962
VpaK11BI	GGWCC	1 cut(s)	180
XagI	CCTNNNNNAGG	1 cut(s)	903
XapI	RAATTY	4 cut(s)	855, 873, 1850, 1869
XceI	RCATGY	1 cut(s)	1207
XcmI	CCANNNNNNNNNTGG	1 cut(s)	100
XmiI	GTMKAC	1 cut(s)	1703
XmnI	GAANNNNTTC	2 cut(s)	832, 1353
XspI	CTAG	9 cut(s)	177, 266, 510, 558, 770, 953, 1035, 1134, 1793

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.