Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0006475

Physical Location & Seq

Genomic Coordinates Reverse (-)

53003426 .. 53010423

Gene Structure 6998 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG308100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2403 bp

ATGGCGGCTGGAAGACATGGGGGTTATCGTGAAAACGAGTTCAGGGAGCGAGAGTCCAGTTTCGAATTGCCGCGGAGGGATTTAACTTCTGCTAAGGAGGACTTGGAGCGGATGAGGAATGGGAATCGTGATGTTCACAAGGGCCGCGTTCGGGATTTGAGAGATAGAATCAGGGCTAGGTCCAAGGAGAGGGCAGTGGCTAATGGTGGATACCGTTCCTCTTCGAGTAGGAGTGATTCCGGCAGCAGTGGCGGTGGTGGGCTAGCAGCCGGTCGCGGGCCTAAGCCTTGTGGGTTTTCTGCCAAGGCATTGGATAGGGAACCTGGTGAATTGTCAAGTGAGAGCGGGTCTGATGATGCTATTGAATCCGGGTCGCAGGGCAGAGATGTAGAGGTTATGAAGGTGGTGGAGAATGGAAGTCAGACTCCGAAGGAGAGGAAAAGGAAGTTTTCGCCTATTGTGTGGGATAGAGATGATAAAGAAGGGAGTAATTCATCCAAGACTAGGATTACAACAGTGCCAACAGCTCCTCCTCCTCCACCCCCACTGGCTAGGGTGTCTCGTCAGTCTCCTAATGTTACTTCAGATAGCAGGGTACAAATATCTTCAGCTAAAATTGATGAAACTGACAAGTTACAACCTTCCTCCCCGGTTAAGTCTCCTGTGGCACCTGAGACTGTTAGCAATGGTGTATATGAGTCTCCGGTAGAGTTGTCTTCACCAGATCAGCATTTAGGGAATGTTCGTGAAGCAGAGCAGCTAGAAGAAGAAGAAGATTATGTTCCAACCCGAAATATATCATCTTCAAGATGGGCAGCAGGAAATAATTCTCCTGGTGATGAAGGTGGAATTTCAGAAAACGAGGAAATTCCTAAAAGGAGGAGGAAAATGCCTCGTTTAGGATCAGTGGAAAACAGAGTACGCAACAGCTCACTGACTCCGGAGCTAGGCGAGCTTAAGAAAGATGGGTCTGAACGAGGTAGGGCGAGATCATCCGAGTCTGATGAACGAGATGCCCTTGGAAGGTCGAGTGGGGATGACTATCCTGATAATGACTCAGAGAGGGATGACTACATGGATGTTGACAAGGATAATGGTAATAATGATAGTGTTAGTCGTTATGATACTAGTTCAGCGGATGAGCATGATTCTCCTGAGACACCAGAGCCTGCAGCTCCTCCACAAAGAAGTGTAAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTCGAGAGACTAAACAAGATAGATGAGGGCACTTATGGTGTTGTATATCGGGCCCAAGATAAGAAAACTGGTGAAATTGTGGCATTGAAGAAGGTAAAGATGGAGAAGGAAAGAGAAGGTTTTCCATTAACTTCTCTGAGGGAAATAAACATTCTCCTTTCTTTTCATCATCCATCAATTGTCGATGTTAAGGAAGTCGTGGTGGGTAGTAACCTTGATAGCATTTTTATGGTGATGGAATACATGGAGCATGATCTTAAGGCACTCATGGAGACAATGAAGCAGCCATTTAGTCCGAGTGAAGTCAAATGCCTTATGCTCCAGCTGTTGGAAGGTGTCAAATATCTTCATGATAATTGGGTGCTTCATCGGGATTTGAAGACATCTAACCTGCTTTTGAATAATCGGGGTGAGTTGAAGATCTGTGACTTTGGGTTGGCTCGTCAATATGGAAGTCCTTTGAAACCGTATACTCATTTGGTGGTTACTCTTTGGTACAGGGCGCCGGAACTTCTGTTGGGAGCAAGAGAATATTCAACGGCAATCGATATGTGGTCACTAGGTTGTATCATGGCTGAGCTGTTATCAAAGGAGCCGCTTTTTAATGGGAAAACGGAATTTGAACAACTTGACAAAATTTTTAAGATACTTGGCACACCAAATGAGACTATTTGGCCTGGGTTTTCCAAACTTCCTGGAGTAAAGGTCAACTTTGTTAAGCATCAGTATAACCTTTTGCGCAAGAAGTTCCCAGCTACTTCGTTTACTGGATCTCCAGTTCTCACTGAAGCTGGATTTGATTTGTTGAATAAGCTTCTAACTTATGACCCTGAGAAGAGAATTTCTGCTGATGCTGCTCTGAATCATGAGTGGTTTCGTGAAGTCCCTCTTCCCAAGACGAAAGATTTCATGCCCACGTTTCCTGCCCAACATGCTCAAGACAGGCGCTCACGGAGAATTTTGAAGAGTCCAGATCCCTTGGAAGAGCAACGGAGAAAGGAGTTGCAAGGGGGTATAGGAACCGGGGCATGTAATTTTGAAGTATCAAAGCAAGCAGGCTCACTAGAGGTTAAAAAATGTTCATCCAGACATTGGTGGAAAACGCTCAATTGTGCAAGTTCGGATGCCTTTGAGCCTTCAAGTGCATTGCGGTACACAAATCTTGGTGTTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007346 GO:0008150 GO:0008152 GO:0009987 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0060255 GO:0065007 GO:0071704 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

800

Amino Acids

89.46

Weight (kDa)

6.27

Isoelectric Point (pI)

55.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	410 - 701	2.4e-72	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	413 - 608	1.2e-34	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006475)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67580 AT1G67580
fragaria_vesca	FvH4_4g24200
malus_domestica	MD13G1113400.v1.1 MD16G1112700.v1.1
prunus_persica	Prupe.1G232700_v2.0.a1 Prupe.1G232700_v2.0.a1 Prupe.1G232700_v2.0.a1 Prupe.1G232700_v2.0.a1 Prupe.1G232700_v2.0.a1 Prupe.1G232700_v2.0.a1
pyrus_communis	pycom13g09880 pycom16g09530
rosa_chinensis	RchiOBHm_Chr4g0431041
rosa_laevigata	RLG00000006930
rosa_multiflora	Rmu_co8378327.1_g000001
rosa_roxburghii	Rroxscaffold_5G00372660
rosa_rugosa	Rorug04G0247500 Rorug04G0247600 Rorug04G0247700.1 Rorug04G0247800
rosa_samantha	Rh4AG304400 Rh4BG311600 Rh4CG327900 Rh4DG308100
rosa_wichuraiana	Rw4G026430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1967
Acc36I	ACCTGC	1 cut(s)	1626
AccB1I	GGYRCC	2 cut(s)	667, 1729
AccB7I	CCANNNNNTGG	2 cut(s)	1555, 2319
AccBSI	CCGCTC	2 cut(s)	109, 345
AccI	GTMKAC	1 cut(s)	1697
AccII	CGCG	3 cut(s)	73, 147, 276
AccIII	TCCGGA	1 cut(s)	940
AclWI	GGATC	3 cut(s)	910, 2005, 2195
AcsI	RAATTY	6 cut(s)	849, 867, 1844, 1863, 2067, 2184
AcuI	CTGAAG	4 cut(s)	567, 591, 1187, 2034
AcyI	GRCGYC	1 cut(s)	1730
AfaI	GTAC	4 cut(s)	597, 921, 1724, 2381
AfiI	CCNNNNNNNGG	9 cut(s)	151, 189, 276, 504, 899, 947, 1023, 1555, 2319
AflII	CTTAAG	2 cut(s)	956, 1484
AhlI	ACTAGT	1 cut(s)	1127
AjnI	CCWGG	4 cut(s)	322, 832, 1903, 1921
AloI	GAACNNNNNNTCC	2 cut(s)	1989, 2021
Alw26I	GTCTC	9 cut(s)	564, 573, 663, 668, 705, 1151, 1228, 1493, 1886
AlwI	GGATC	3 cut(s)	910, 2005, 2195
AlwNI	CAGNNNCTG	1 cut(s)	1169
Aor13HI	TCCGGA	1 cut(s)	940
AoxI	GGCC	4 cut(s)	142, 278, 1278, 1901
ApaI	GGGCCC	1 cut(s)	1282
ApeKI	GCWGC	7 cut(s)	243, 266, 757, 815, 1172, 1510, 2081
ApoI	RAATTY	6 cut(s)	849, 867, 1844, 1863, 2067, 2184
Asp700I	GAANNNNTTC	3 cut(s)	826, 1347, 2132
AspLEI	GCGC	3 cut(s)	1732, 1968, 2175
AspS9I	GGNCC	5 cut(s)	142, 180, 278, 1278, 1279
AsuC2I	CCSGG	3 cut(s)	370, 650, 2251
AsuHPI	GGTGA	6 cut(s)	338, 711, 848, 1310, 1471, 1649
AsuII	TTCGAA	1 cut(s)	63
AsuNHI	GCTAGC	1 cut(s)	262
AvaII	GGWCC	1 cut(s)	180
BaeGI	GKGCMC	2 cut(s)	1259, 1282
BanI	GGYRCC	2 cut(s)	667, 1729
BanII	GRGCYC	1 cut(s)	1282
BarI	GAAGNNNNNNTAC	2 cut(s)	1185, 1217
BbsI	GAAGAC	3 cut(s)	19, 708, 1613
BbvI	GCAGC	7 cut(s)	255, 278, 769, 827, 1184, 1522, 2068
BccI	CCATC	5 cut(s)	804, 959, 1321, 1408, 1456
BceAI	ACGGC	1 cut(s)	1782
BciT130I	CCWGG	4 cut(s)	324, 834, 1905, 1923
BciVI	GTATCC	1 cut(s)	203
BcnI	CCSGG	3 cut(s)	370, 650, 2251
BcoDI	GTCTC	9 cut(s)	564, 573, 663, 668, 705, 1151, 1228, 1493, 1886
BcuI	ACTAGT	1 cut(s)	1127
BfaI	CTAG	9 cut(s)	177, 263, 504, 552, 761, 947, 1128, 1787, 2291
BfmI	CTRYAG	1 cut(s)	1170
BfoI	RGCGCY	2 cut(s)	1733, 2176
BfrI	CTTAAG	2 cut(s)	956, 1484
BfuAI	ACCTGC	1 cut(s)	1626
BfuI	GTATCC	1 cut(s)	203
BglII	AGATCT	1 cut(s)	1647
BlpI	GCTNAGC	1 cut(s)	1803
Bme1390I	CCNGG	7 cut(s)	324, 370, 650, 834, 1905, 1923, 2251
Bme18I	GGWCC	1 cut(s)	180
BmgT120I	GGNCC	5 cut(s)	142, 180, 278, 1278, 1279
BmiI	GGNNCC	6 cut(s)	321, 669, 1280, 1731, 1821, 2248
BmrFI	CCNGG	7 cut(s)	324, 370, 650, 834, 1905, 1923, 2251
BmsI	GCATC	5 cut(s)	346, 1003, 1957, 2068, 2341
BmtI	GCTAGC	1 cut(s)	266
BpiI	GAAGAC	3 cut(s)	19, 708, 1613
BpmI	CTGGAG	3 cut(s)	1532, 1944, 1986
Bpu10I	CCTNAGC	2 cut(s)	93, 282
Bpu1102I	GCTNAGC	1 cut(s)	1803
Bpu14I	TTCGAA	1 cut(s)	63
BpuEI	CTTGAG	1 cut(s)	2148
BpuMI	CCSGG	3 cut(s)	370, 650, 2251
Bsa29I	ATCGAT	1 cut(s)	1773
BsaBI	GATNNNNATC	1 cut(s)	1041
BsaHI	GRCGYC	1 cut(s)	1730
BsaJI	CCNNGG	8 cut(s)	71, 183, 303, 648, 1018, 1904, 2205, 2250
BsaWI	WCCGGW	2 cut(s)	703, 940
BsaXI	ACNNNNNCTCC	8 cut(s)	38, 68, 514, 544, 1917, 1947, 1984, 2014
Bsc4I	CCNNNNNNNGG	9 cut(s)	151, 189, 276, 504, 899, 947, 1023, 1555, 2319
Bse118I	RCCGGY	1 cut(s)	269
Bse1I	ACTGG	5 cut(s)	57, 552, 1300, 1999, 2003
Bse3DI	GCAATG	2 cut(s)	691, 2372
Bse8I	GATNNNNATC	1 cut(s)	1041
BseAI	TCCGGA	1 cut(s)	940
BseBI	CCWGG	4 cut(s)	324, 834, 1905, 1923
BseCI	ATCGAT	1 cut(s)	1773
BseDI	CCNNGG	8 cut(s)	71, 183, 303, 648, 1018, 1904, 2205, 2250
BseJI	GATNNNNATC	1 cut(s)	1041
BseLI	CCNNNNNNNGG	9 cut(s)	151, 189, 276, 504, 899, 947, 1023, 1555, 2319
BseMI	GCAATG	2 cut(s)	691, 2372
BseMII	CTCAG	6 cut(s)	663, 1071, 1146, 1355, 1794, 2049
BseNI	ACTGG	5 cut(s)	57, 552, 1300, 1999, 2003
BseRI	GAGGAG	5 cut(s)	519, 522, 525, 895, 1167
BseSI	GKGCMC	2 cut(s)	1259, 1282
BseXI	GCAGC	7 cut(s)	255, 278, 769, 827, 1184, 1522, 2068
BseYI	CCCAGC	1 cut(s)	1978
Bsh1236I	CGCG	3 cut(s)	73, 147, 276
Bsh1285I	CGRYCG	1 cut(s)	274
BshFI	GGCC	4 cut(s)	144, 280, 1280, 1903
BshNI	GGYRCC	2 cut(s)	667, 1729
BshVI	ATCGAT	1 cut(s)	1773
BsiEI	CGRYCG	1 cut(s)	274
BsiSI	CCGG	8 cut(s)	240, 270, 369, 650, 704, 941, 1733, 2250
BslFI	GGGAC	1 cut(s)	2096
BslI	CCNNNNNNNGG	9 cut(s)	151, 189, 276, 504, 899, 947, 1023, 1555, 2319
BsmAI	GTCTC	9 cut(s)	564, 573, 663, 668, 705, 1151, 1228, 1493, 1886
BsmFI	GGGAC	1 cut(s)	2096
BsnI	GGCC	4 cut(s)	144, 280, 1280, 1903
Bsp119I	TTCGAA	1 cut(s)	63
Bsp120I	GGGCCC	1 cut(s)	1278
Bsp1286I	GDGCHC	2 cut(s)	1259, 1282
Bsp13I	TCCGGA	1 cut(s)	940
Bsp143I	GATC	7 cut(s)	724, 902, 989, 1480, 1647, 1997, 2200
Bsp1720I	GCTNAGC	1 cut(s)	1803
BspANI	GGCC	4 cut(s)	144, 280, 1280, 1903
BspCNI	CTCAG	6 cut(s)	664, 1070, 1147, 1356, 1795, 2050
BspDI	ATCGAT	1 cut(s)	1773
BspEI	TCCGGA	1 cut(s)	940
BspFNI	CGCG	3 cut(s)	73, 147, 276
BspHI	TCATGA	2 cut(s)	1576, 2092
BspLI	GGNNCC	6 cut(s)	321, 669, 1280, 1731, 1821, 2248
BspMAI	CTGCAG	1 cut(s)	1174
BspMI	ACCTGC	1 cut(s)	1626
BspOI	GCTAGC	1 cut(s)	266
BspPI	GGATC	3 cut(s)	910, 2005, 2195
BspQI	GCTCTTC	1 cut(s)	2205
BspT104I	TTCGAA	1 cut(s)	63
BspT107I	GGYRCC	2 cut(s)	667, 1729
BspTI	CTTAAG	2 cut(s)	956, 1484
BsrBI	CCGCTC	2 cut(s)	109, 345
BsrDI	GCAATG	2 cut(s)	691, 2372
BsrFI	RCCGGY	1 cut(s)	269
BsrI	ACTGG	5 cut(s)	57, 552, 1300, 1999, 2003
BssAI	RCCGGY	1 cut(s)	269
BssECI	CCNNGG	8 cut(s)	71, 183, 303, 648, 1018, 1904, 2205, 2250
BssMI	GATC	7 cut(s)	724, 902, 989, 1480, 1647, 1997, 2200
BssNAI	GTATAC	1 cut(s)	1698
BssNI	GRCGYC	1 cut(s)	1730
BssT1I	CCWWGG	4 cut(s)	183, 303, 1018, 2205
Bst1107I	GTATAC	1 cut(s)	1698
Bst2UI	CCWGG	4 cut(s)	324, 834, 1905, 1923
Bst4CI	ACNGT	4 cut(s)	215, 517, 679, 1695
Bst6I	CTCTTC	5 cut(s)	226, 2057, 2121, 2186, 2205
BstACI	GRCGYC	1 cut(s)	1730
BstAFI	CTTAAG	2 cut(s)	956, 1484
BstBI	TTCGAA	1 cut(s)	63
BstC8I	GCNNGC	6 cut(s)	264, 278, 953, 1170, 2280, 2284
BstDEI	CTNAG	8 cut(s)	93, 282, 672, 1057, 1155, 1364, 1803, 2058
BstDSI	CCRYGG	1 cut(s)	71
BstENI	CCTNNNNNAGG	1 cut(s)	897
BstFNI	CGCG	3 cut(s)	73, 147, 276
BstH2I	RGCGCY	2 cut(s)	1733, 2176
BstHHI	GCGC	3 cut(s)	1732, 1968, 2175
BstKTI	GATC	7 cut(s)	727, 905, 992, 1483, 1650, 2000, 2203
BstMAI	GTCTC	9 cut(s)	564, 573, 663, 668, 705, 1151, 1228, 1493, 1886
BstMBI	GATC	7 cut(s)	724, 902, 989, 1480, 1647, 1997, 2200
BstMCI	CGRYCG	1 cut(s)	274
BstMWI	GCNNNNNNNGC	4 cut(s)	249, 952, 2081, 2159
BstNI	CCWGG	4 cut(s)	324, 834, 1905, 1923
BstNSI	RCATGY	3 cut(s)	1201, 2162, 2259
BstSCI	CCNGG	7 cut(s)	322, 368, 648, 832, 1903, 1921, 2249
BstSFI	CTRYAG	1 cut(s)	1170
BstSLI	GKGCMC	2 cut(s)	1259, 1282
BstUI	CGCG	3 cut(s)	73, 147, 276
BstV1I	GCAGC	7 cut(s)	255, 278, 769, 827, 1184, 1522, 2068
BstV2I	GAAGAC	3 cut(s)	19, 708, 1613
BstX2I	RGATCY	3 cut(s)	1647, 1997, 2200
BstXI	CCANNNNNNTGG	1 cut(s)	310
BstYI	RGATCY	3 cut(s)	1647, 1997, 2200
BstZ17I	GTATAC	1 cut(s)	1698
Bsu15I	ATCGAT	1 cut(s)	1773
BsuI	GTATCC	1 cut(s)	203
BsuRI	GGCC	4 cut(s)	144, 280, 1280, 1903
BsuTUI	ATCGAT	1 cut(s)	1773
BtgI	CCRYGG	1 cut(s)	71
BtsI	GCAGTG	2 cut(s)	201, 253
BtsIMutI	CAGTG	7 cut(s)	201, 253, 522, 545, 912, 932, 2010
BveI	ACCTGC	1 cut(s)	1626
Cac8I	GCNNGC	6 cut(s)	264, 278, 953, 1170, 2280, 2284
CaiI	CAGNNNCTG	1 cut(s)	1169
CciI	TCATGA	2 cut(s)	1576, 2092
CfoI	GCGC	3 cut(s)	1732, 1968, 2175
Cfr10I	RCCGGY	1 cut(s)	269
Cfr13I	GGNCC	5 cut(s)	142, 180, 278, 1278, 1279
Cfr42I	CCGCGG	1 cut(s)	74
ClaI	ATCGAT	1 cut(s)	1773
CsiI	ACCWGGT	1 cut(s)	322
Csp6I	GTAC	4 cut(s)	596, 920, 1723, 2380
CviQI	GTAC	4 cut(s)	596, 920, 1723, 2380
DdeI	CTNAG	8 cut(s)	93, 282, 672, 1057, 1155, 1364, 1803, 2058
DinI	GGCGCC	1 cut(s)	1731
DpnI	GATC	7 cut(s)	726, 904, 991, 1482, 1649, 1999, 2202
DpnII	GATC	7 cut(s)	724, 902, 989, 1480, 1647, 1997, 2200
Eam1104I	CTCTTC	5 cut(s)	226, 2057, 2121, 2186, 2205
EarI	CTCTTC	5 cut(s)	226, 2057, 2121, 2186, 2205
Eco130I	CCWWGG	4 cut(s)	183, 303, 1018, 2205
Eco24I	GRGCYC	1 cut(s)	1282
Eco47I	GGWCC	1 cut(s)	180
Eco57I	CTGAAG	4 cut(s)	567, 591, 1187, 2034
EcoNI	CCTNNNNNAGG	1 cut(s)	897
EcoRII	CCWGG	4 cut(s)	322, 832, 1903, 1921
EcoT14I	CCWWGG	4 cut(s)	183, 303, 1018, 2205
EcoT38I	GRGCYC	1 cut(s)	1282
EgeI	GGCGCC	1 cut(s)	1731
EheI	GGCGCC	1 cut(s)	1731
ErhI	CCWWGG	4 cut(s)	183, 303, 1018, 2205
FalI	AAGNNNNNCTT	6 cut(s)	86, 118, 1922, 1954, 2100, 2132
FaqI	GGGAC	1 cut(s)	2096
FauI	CCCGC	2 cut(s)	269, 338
FblI	GTMKAC	1 cut(s)	1697
FriOI	GRGCYC	1 cut(s)	1282
FspBI	CTAG	9 cut(s)	177, 263, 504, 552, 761, 947, 1128, 1787, 2291
FspI	TGCGCA	1 cut(s)	1967
GlaI	GCGC	3 cut(s)	1731, 1967, 2174
GsaI	CCCAGC	1 cut(s)	1982
GsuI	CTGGAG	3 cut(s)	1532, 1944, 1986
HaeII	RGCGCY	2 cut(s)	1733, 2176
HaeIII	GGCC	4 cut(s)	144, 280, 1280, 1903
HapII	CCGG	8 cut(s)	240, 270, 369, 650, 704, 941, 1733, 2250
HhaI	GCGC	3 cut(s)	1732, 1968, 2175
Hin1I	GRCGYC	1 cut(s)	1730
Hin6I	GCGC	3 cut(s)	1730, 1966, 2173
HinP1I	GCGC	3 cut(s)	1730, 1966, 2173
HincII	GTYRAC	2 cut(s)	1084, 1936
HindII	GTYRAC	2 cut(s)	1084, 1936
HindIII	AAGCTT	1 cut(s)	2039
HpaII	CCGG	8 cut(s)	240, 270, 369, 650, 704, 941, 1733, 2250
HphI	GGTGA	6 cut(s)	338, 711, 848, 1310, 1471, 1649
Hpy166II	GTNNAC	7 cut(s)	136, 1084, 1195, 1698, 1936, 1992, 2382
Hpy8I	GTNNAC	7 cut(s)	136, 1084, 1195, 1698, 1936, 1992, 2382
HpyCH4III	ACNGT	4 cut(s)	215, 517, 679, 1695
HpyCH4IV	ACGT	1 cut(s)	2144
HpyCH4V	TGCA	4 cut(s)	1172, 2233, 2342, 2372
HpyF10VI	GCNNNNNNNGC	4 cut(s)	249, 952, 2081, 2159
HpyF3I	CTNAG	8 cut(s)	93, 282, 672, 1057, 1155, 1364, 1803, 2058
HpySE526I	ACGT	1 cut(s)	2144
Hsp92I	GRCGYC	1 cut(s)	1730
HspAI	GCGC	3 cut(s)	1730, 1966, 2173
KasI	GGCGCC	1 cut(s)	1729
Kpn2I	TCCGGA	1 cut(s)	940
KspI	CCGCGG	1 cut(s)	74
Kzo9I	GATC	7 cut(s)	724, 902, 989, 1480, 1647, 1997, 2200
LguI	GCTCTTC	1 cut(s)	2205
LmnI	GCTCC	9 cut(s)	46, 106, 532, 943, 1180, 1474, 1551, 1748, 1819
Lsp1109I	GCAGC	7 cut(s)	255, 278, 769, 827, 1184, 1522, 2068
LweI	GCATC	5 cut(s)	346, 1003, 1957, 2068, 2341
MabI	ACCWGGT	1 cut(s)	322
MaeI	CTAG	9 cut(s)	177, 263, 504, 552, 761, 947, 1128, 1787, 2291
MaeII	ACGT	1 cut(s)	2144
MaeIII	GTNAC	6 cut(s)	577, 633, 1436, 1652, 1711, 1782
MalI	GATC	7 cut(s)	726, 904, 991, 1482, 1649, 1999, 2202
MbiI	CCGCTC	2 cut(s)	109, 345
MboI	GATC	7 cut(s)	724, 902, 989, 1480, 1647, 1997, 2200
MfeI	CAATTG	2 cut(s)	1404, 2335
MflI	RGATCY	3 cut(s)	1647, 1997, 2200
MhlI	GDGCHC	2 cut(s)	1259, 1282
Mly113I	GGCGCC	1 cut(s)	1730
MlyI	GAGTC	7 cut(s)	62, 418, 707, 931, 1007, 1049, 2203
MmeI	TCCRAC	2 cut(s)	809, 1536
MroI	TCCGGA	1 cut(s)	940
MroXI	GAANNNNTTC	3 cut(s)	826, 1347, 2132
MslI	CAYNNNNRTG	1 cut(s)	1454
MspA1I	CMGCKG	3 cut(s)	73, 1136, 1552
MspCI	CTTAAG	2 cut(s)	956, 1484
MspI	CCGG	8 cut(s)	240, 270, 369, 650, 704, 941, 1733, 2250
MspR9I	CCNGG	7 cut(s)	324, 370, 650, 834, 1905, 1923, 2251
MunI	CAATTG	2 cut(s)	1404, 2335
MvaI	CCWGG	4 cut(s)	324, 834, 1905, 1923
MvnI	CGCG	3 cut(s)	73, 147, 276
MwoI	GCNNNNNNNGC	4 cut(s)	249, 952, 2081, 2159
NarI	GGCGCC	1 cut(s)	1730
NciI	CCSGG	3 cut(s)	370, 650, 2251
NdeII	GATC	7 cut(s)	724, 902, 989, 1480, 1647, 1997, 2200
NheI	GCTAGC	1 cut(s)	262
NlaIV	GGNNCC	6 cut(s)	321, 669, 1280, 1731, 1821, 2248
NmuCI	GTSAC	2 cut(s)	1652, 1782
NsbI	TGCGCA	1 cut(s)	1967
NspI	RCATGY	3 cut(s)	1201, 2162, 2259
NspV	TTCGAA	1 cut(s)	63
PagI	TCATGA	2 cut(s)	1576, 2092
PciSI	GCTCTTC	1 cut(s)	2205
PdmI	GAANNNNTTC	3 cut(s)	826, 1347, 2132
PfeI	GAWTC	6 cut(s)	124, 168, 236, 365, 1148, 2089
PflMI	CCANNNNNTGG	2 cut(s)	1555, 2319
PfoI	TCCNGGA	1 cut(s)	1921
PleI	GAGTC	7 cut(s)	61, 418, 706, 931, 1006, 1049, 2202
PluTI	GGCGCC	1 cut(s)	1733
PpsI	GAGTC	7 cut(s)	61, 418, 706, 931, 1006, 1049, 2202
Psp6I	CCWGG	4 cut(s)	322, 832, 1903, 1921
PspFI	CCCAGC	1 cut(s)	1978
PspGI	CCWGG	4 cut(s)	322, 832, 1903, 1921
PspN4I	GGNNCC	6 cut(s)	321, 669, 1280, 1731, 1821, 2248
PspOMI	GGGCCC	1 cut(s)	1278
PspPI	GGNCC	5 cut(s)	142, 180, 278, 1278, 1279
PstI	CTGCAG	1 cut(s)	1174
PstNI	CAGNNNCTG	1 cut(s)	1169
PsuI	RGATCY	3 cut(s)	1647, 1997, 2200
PvuII	CAGCTG	1 cut(s)	1552
RsaI	GTAC	4 cut(s)	597, 921, 1724, 2381
RsaNI	GTAC	4 cut(s)	596, 920, 1723, 2380
RseI	CAYNNNNRTG	1 cut(s)	1454
SacII	CCGCGG	1 cut(s)	74
SapI	GCTCTTC	1 cut(s)	2205
Sau3AI	GATC	7 cut(s)	724, 902, 989, 1480, 1647, 1997, 2200
Sau96I	GGNCC	5 cut(s)	142, 180, 278, 1278, 1279
SchI	GAGTC	7 cut(s)	62, 418, 707, 931, 1007, 1049, 2203
ScrFI	CCNGG	7 cut(s)	324, 370, 650, 834, 1905, 1923, 2251
SduI	GDGCHC	2 cut(s)	1259, 1282
SexAI	ACCWGGT	1 cut(s)	322
SfaNI	GCATC	5 cut(s)	346, 1003, 1957, 2068, 2341
SfcI	CTRYAG	1 cut(s)	1170
SfoI	GGCGCC	1 cut(s)	1731
Sfr303I	CCGCGG	1 cut(s)	74
SfuI	TTCGAA	1 cut(s)	63
SgrBI	CCGCGG	1 cut(s)	74
SinI	GGWCC	1 cut(s)	180
SmiMI	CAYNNNNRTG	1 cut(s)	1454
SmlI	CTYRAG	3 cut(s)	956, 1484, 2163
SmoI	CTYRAG	3 cut(s)	956, 1484, 2163
SpeI	ACTAGT	1 cut(s)	1127
SspDI	GGCGCC	1 cut(s)	1729
SspI	AATATT	1 cut(s)	1760
SspMI	CTAG	9 cut(s)	177, 263, 504, 552, 761, 947, 1128, 1787, 2291
StyD4I	CCNGG	7 cut(s)	322, 368, 648, 832, 1903, 1921, 2249
StyI	CCWWGG	4 cut(s)	183, 303, 1018, 2205
TaaI	ACNGT	4 cut(s)	215, 517, 679, 1695
TaiI	ACGT	1 cut(s)	2147
TaqI	TCGA	6 cut(s)	63, 224, 1028, 1230, 1410, 1773
TauI	GCSGC	4 cut(s)	8, 73, 147, 1825
TfiI	GAWTC	6 cut(s)	124, 168, 236, 365, 1148, 2089
TscAI	CASTG	7 cut(s)	201, 253, 522, 552, 912, 939, 2017
TseFI	GTSAC	2 cut(s)	1652, 1782
TseI	GCWGC	7 cut(s)	243, 266, 757, 815, 1172, 1510, 2081
Tsp45I	GTSAC	2 cut(s)	1652, 1782
TspGWI	ACGGA	3 cut(s)	1856, 2194, 2233
TspRI	CASTG	7 cut(s)	201, 253, 522, 552, 912, 939, 2017
Van91I	CCANNNNNTGG	2 cut(s)	1555, 2319
Vha464I	CTTAAG	2 cut(s)	956, 1484
VpaK11BI	GGWCC	1 cut(s)	180
XagI	CCTNNNNNAGG	1 cut(s)	897
XapI	RAATTY	6 cut(s)	849, 867, 1844, 1863, 2067, 2184
XceI	RCATGY	3 cut(s)	1201, 2162, 2259
XmiI	GTMKAC	1 cut(s)	1697
XmnI	GAANNNNTTC	3 cut(s)	826, 1347, 2132
XspI	CTAG	9 cut(s)	177, 263, 504, 552, 761, 947, 1128, 1787, 2291

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.