Rorug04G0247500
MYB Family

Protein of unknown function (DUF3537)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000402
Physical Location & Seq
Forward (+)
41846857 .. 41849938
3082 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0247500.1

Sequence Viewer

Length: 1188 bp
ATGTCAATACGGAGCTTAATCCAGGACATGAGGTTTTCCCGGTCGCAGCGGGTGGTTCAGGACCGGTCGGCGGTGGCGGCGCCGGAGGTGGGCGACTCGGTGAAGCAGAGCTGCTGGGCACAGATGCCTCAGGAGCTTCTCAGGGAGGTTTTGATGAGAATTGAGGCTTCTGAGGCCGCCTGGCCGCCGCGGAAGAGCGTCGTCGCCTGCGCCGGAGTTTGCCGGAGCTGGAGGCTGCTGGCGAAAGAGATCGTTAAATCGCCTGAGCTCTCCGGAAAGCTCACCTTTCCCATCTCCGTTAAGCAGCCTGGTCCAAGGGATGAACTGCTACGGTGCTTTATAAAAAGGAACCGCTCAACCCAGACATATTATCTTTACCTCGGTTTGACCCATGCATTAACTGATGAGGGAAAGTTCCTACTTGCTGCTCGCAAGTATAAACGCCCCACCTGCACAGACTATATTATCTCACTAAATGGTGATGAAATGTCAAAGGGCAGCAGCAACTATATTGGAAAACTGAGGTCAAATTTTTTAGGAACCAAGTTCACCATCTTTGATGGGCAGCCAACTGATGTGGGAGCCAAGTTTACAAAAAGTCGATCCACTAGGCTAGTGAATTTGAAACAAGTTTCACCTAGGGTCCCTGCTGGCAACTATCCAGTGGCTCACATTTCATATGAGCTAAATATGTTGGGTTCCAGAGTTCGTACAAGCAGGGGTCCAAGGAGAATGCAATGCACCATGGATGGCATTCCTGCCTCTGCGATTCAACCTGGAGGTGTAGCACCCACACAGGCAGAGTTTTCAAGTAGTACTGCCGAGTTCTTTCCGTCCCTTCCATTTTTCCGTTCGAAATCAACTCGCATGGAAAGTTTCCTAGGGCCTTCGGCCAAACCAAAAGATGGGGTGATCGTGTTGAGAAACAAAGCTCCAAGGTGGCATGAACAACTCCAGTGTTGGTGTTTGAACTTTCATGGACGAGTAACAGTTGCTTCAGTGAAAAACTTTCAGTTGGTGGCTTCTCCTGAAAATGGACCAGCTGGGCCAGAGCACGAGAAGATTGTCCTCCAATTTGGGAAAGTGGGCAAGGATTTGTTTACCATGGATTACAGGTACCCAATATCAGCATTCCAGGCATTTTCAATCTGCCTCAGCAGCTTTGACACCAAGATCGCTTGTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3537

Protein Analysis

395

Amino Acids

44.13

Weight (kDa)

9.78

Isoelectric Point (pI)

56.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tub PF01167 100 - 390 7.4e-104 Tub family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000402)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56650 AT1G66370 AT1G66380 AT1G66380 AT1G66390
fragaria_vesca FvH4_1g22020 FvH4_1g22040 FvH4_5g34660 FvH4_5g34660 FvH4_6g01170
malus_domestica MD04G1235800.v1.1 MD05G1276500.v1.1 MD05G1276700.v1.1 MD09G1265100.v1.1 MD09G1278400.v1.1 MD09G1278600.v1.1 MD17G1261000.v1.1 MD17G1261100.v1.1
prunus_persica Prupe.3G163000_v2.0.a1 Prupe.3G163100_v2.0.a1 Prupe.3G163300_v2.0.a1 Prupe.6G176200_v2.0.a1 Prupe.6G176300_v2.0.a1 Prupe.6G355700_v2.0.a1
pyrus_communis pycom05g25770
rosa_chinensis RchiOBHm_Chr2g0116041 RchiOBHm_Chr2g0116071 RchiOBHm_Chr3g0448721 RchiOBHm_Chr3g0492711 RchiOBHm_Chr4g0415831 RchiOBHm_Chr4g0415891 RchiOBHm_Chr7g0235271
rosa_laevigata RLG00000001168 RLG00000008031 RLG00000008035 RLG00000018232 RLG00000018234 RLG00000025877
rosa_multiflora Rmu_sc0003147.1_g000006 Rmu_sc0003147.1_g000008 Rmu_sc0003147.1_g000018 Rmu_sc0004637.1_g000011 Rmu_sc0004657.1_g000064 Rmu_sc0013612.1_g000010 Rmu_sc0017810.1_g000002 Rmu_sc0027086.1_g000003
rosa_roxburghii Rroxscaffold_2G00127520 Rroxscaffold_2G00127530 Rroxscaffold_2G00127560 Rroxscaffold_2G00128380 Rroxscaffold_5G00359700 Rroxscaffold_5G00359730 Rroxscaffold_6G00392130
rosa_rugosa Rorug01G0050500 Rorug02G0202600 Rorug02G0202700 Rorug02G0202700 Rorug02G0202900 Rorug02G0203000 Rorug02G0616200 Rorug03G0256600 Rorug04G0137200 Rorug04G0247500
rosa_samantha Rh2AG259100 Rh2AG259200 Rh2BG270400 Rh2BG270700 Rh2BG270800 Rh2CG265700 Rh2CG265900 Rh2DG267400 Rh2DG267600 Rh3AG014400 Rh3AG069900 Rh3AG305900 Rh3BG014200 Rh3BG342300 Rh3CG013200 Rh3DG014800 Rh3DG341700 Rh4AG198700 Rh4AG199200 Rh4AG199500 Rh4BG197000 Rh4CG210100 Rh4DG196500 Rh4DG197000 Rh4DG197300 Rh7AG444500 Rh7DG433400
rosa_wichuraiana Rw0G010310 Rw2G020310 Rw2G020320 Rw2G020330 Rw3G001070 Rw3G026940 Rw4G016830 Rw4G016880 Rw4G016910 Rw7G036930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 341
AarI CACCTGC 1 cut(s) 458
Acc36I ACCTGC 1 cut(s) 458
Acc65I GGTACC 1 cut(s) 1116
AccB1I GGYRCC 2 cut(s) 79, 1116
AccB7I CCANNNNNTGG 1 cut(s) 905
AccBSI CCGCTC 1 cut(s) 354
AccII CGCG 1 cut(s) 190
AccIII TCCGGA 1 cut(s) 272
AciI CCGC 8 cut(s) 49, 71, 77, 177, 185, 188, 190, 352
AclWI GGATC 1 cut(s) 597
AcoI YGGCCR 2 cut(s) 182, 891
AcsI RAATTY 2 cut(s) 529, 619
AcuI CTGAAG 1 cut(s) 981
AcyI GRCGYC 1 cut(s) 80
AfaI GTAC 3 cut(s) 712, 817, 1118
AfiI CCNNNNNNNGG 4 cut(s) 70, 89, 905, 1034
AgeI ACCGGT 1 cut(s) 63
AgsI TTSAA 5 cut(s) 625, 773, 810, 970, 1146
AjnI CCWGG 5 cut(s) 21, 179, 307, 775, 1134
Alw21I GWGCWC 2 cut(s) 270, 1056
AlwI GGATC 1 cut(s) 597
Aor13HI TCCGGA 1 cut(s) 272
AoxI GGCC 5 cut(s) 174, 182, 884, 891, 1046
ApeKI GCWGC 9 cut(s) 46, 111, 235, 304, 425, 498, 501, 565, 1158
ApoI RAATTY 2 cut(s) 529, 619
AsiGI ACCGGT 1 cut(s) 63
Asp718I GGTACC 1 cut(s) 1116
AspA2I CCTAGG 2 cut(s) 638, 880
AspLEI GCGC 2 cut(s) 82, 212
AspS9I GGNCC 7 cut(s) 61, 311, 643, 722, 884, 1037, 1046
AsuC2I CCSGG 1 cut(s) 40
AsuHPI GGTGA 6 cut(s) 112, 274, 491, 541, 627, 922
AsuII TTCGAA 1 cut(s) 854
AvaII GGWCC 5 cut(s) 61, 311, 643, 722, 1037
AvrII CCTAGG 2 cut(s) 638, 880
AxyI CCTNAGG 1 cut(s) 129
BaeGI GKGCMC 1 cut(s) 121
BanI GGYRCC 2 cut(s) 79, 1116
BanII GRGCYC 1 cut(s) 270
BauI CACGAG 1 cut(s) 1055
Bbv12I GWGCWC 2 cut(s) 270, 1056
BbvCI CCTCAGC 1 cut(s) 1154
BbvI GCAGC 9 cut(s) 58, 98, 222, 316, 412, 510, 513, 577, 1170
BccI CCATC 5 cut(s) 299, 554, 560, 743, 899
BciT130I CCWGG 5 cut(s) 23, 181, 309, 777, 1136
BcnI CCSGG 1 cut(s) 40
BfaI CTAG 4 cut(s) 609, 614, 639, 881
BfoI RGCGCY 1 cut(s) 83
BfuAI ACCTGC 1 cut(s) 458
BlnI CCTAGG 2 cut(s) 638, 880
BmcAI AGTACT 1 cut(s) 817
Bme1390I CCNGG 6 cut(s) 23, 40, 181, 309, 777, 1136
Bme18I GGWCC 5 cut(s) 61, 311, 643, 722, 1037
BmgT120I GGNCC 7 cut(s) 61, 311, 643, 722, 884, 1037, 1046
BmiI GGNNCC 9 cut(s) 81, 350, 541, 583, 644, 645, 700, 723, 1118
BmrFI CCNGG 6 cut(s) 23, 40, 181, 309, 777, 1136
BmsI GCATC 1 cut(s) 114
BpmI CTGGAG 3 cut(s) 250, 798, 938
Bpu10I CCTNAGC 2 cut(s) 264, 1154
Bpu14I TTCGAA 1 cut(s) 854
BpuMI CCSGG 1 cut(s) 40
BsaHI GRCGYC 1 cut(s) 80
BsaJI CCNNGG 9 cut(s) 188, 314, 379, 638, 725, 744, 880, 935, 1104
BsaWI WCCGGW 2 cut(s) 63, 272
Bsc4I CCNNNNNNNGG 4 cut(s) 70, 89, 905, 1034
Bse118I RCCGGY 1 cut(s) 63
Bse1I ACTGG 2 cut(s) 662, 955
Bse21I CCTNAGG 1 cut(s) 129
Bse3DI GCAATG 1 cut(s) 743
BseAI TCCGGA 1 cut(s) 272
BseBI CCWGG 5 cut(s) 23, 181, 309, 777, 1136
BseDI CCNNGG 9 cut(s) 188, 314, 379, 638, 725, 744, 880, 935, 1104
BseGI GGATG 2 cut(s) 325, 754
BseLI CCNNNNNNNGG 4 cut(s) 70, 89, 905, 1034
BseMI GCAATG 1 cut(s) 743
BseMII CTCAG 6 cut(s) 143, 154, 162, 255, 512, 1168
BseNI ACTGG 2 cut(s) 662, 955
BseSI GKGCMC 1 cut(s) 121
BseXI GCAGC 9 cut(s) 58, 98, 222, 316, 412, 510, 513, 577, 1170
BseYI CCCAGC 2 cut(s) 114, 1043
BsgI GTGCAG 1 cut(s) 436
Bsh1236I CGCG 1 cut(s) 190
Bsh1285I CGRYCG 2 cut(s) 44, 68
BshFI GGCC 5 cut(s) 176, 184, 886, 893, 1048
BshNI GGYRCC 2 cut(s) 79, 1116
BshTI ACCGGT 1 cut(s) 63
BsiEI CGRYCG 2 cut(s) 44, 68
BsiHKAI GWGCWC 2 cut(s) 270, 1056
BsiSI CCGG 6 cut(s) 40, 64, 83, 213, 223, 273
BslFI GGGAC 2 cut(s) 629, 820
BslI CCNNNNNNNGG 4 cut(s) 70, 89, 905, 1034
BsmFI GGGAC 2 cut(s) 629, 820
BsmI GAATGC 3 cut(s) 738, 753, 1130
BsnI GGCC 5 cut(s) 176, 184, 886, 893, 1048
Bsp119I TTCGAA 1 cut(s) 854
Bsp1286I GDGCHC 3 cut(s) 121, 270, 1056
Bsp13I TCCGGA 1 cut(s) 272
Bsp143I GATC 4 cut(s) 249, 602, 912, 1173
Bsp19I CCATGG 2 cut(s) 744, 1104
BspACI CCGC 8 cut(s) 49, 71, 77, 177, 185, 188, 190, 352
BspANI GGCC 5 cut(s) 176, 184, 886, 893, 1048
BspCNI CTCAG 6 cut(s) 142, 153, 163, 256, 513, 1167
BspEI TCCGGA 1 cut(s) 272
BspFNI CGCG 1 cut(s) 190
BspLI GGNNCC 9 cut(s) 81, 350, 541, 583, 644, 645, 700, 723, 1118
BspMI ACCTGC 1 cut(s) 458
BspPI GGATC 1 cut(s) 597
BspQI GCTCTTC 1 cut(s) 188
BspT104I TTCGAA 1 cut(s) 854
BspT107I GGYRCC 2 cut(s) 79, 1116
BsrBI CCGCTC 1 cut(s) 354
BsrDI GCAATG 1 cut(s) 743
BsrFI RCCGGY 1 cut(s) 63
BsrI ACTGG 2 cut(s) 662, 955
BssAI RCCGGY 1 cut(s) 63
BssECI CCNNGG 9 cut(s) 188, 314, 379, 638, 725, 744, 880, 935, 1104
BssMI GATC 4 cut(s) 249, 602, 912, 1173
BssNI GRCGYC 1 cut(s) 80
BssSI CACGAG 1 cut(s) 1055
BssT1I CCWWGG 7 cut(s) 314, 638, 725, 744, 880, 935, 1104
Bst2BI CACGAG 1 cut(s) 1055
Bst2UI CCWGG 5 cut(s) 23, 181, 309, 777, 1136
Bst4CI ACNGT 2 cut(s) 333, 991
Bst6I CTCTTC 1 cut(s) 188
BstACI GRCGYC 1 cut(s) 80
BstBI TTCGAA 1 cut(s) 854
BstC8I GCNNGC 4 cut(s) 208, 240, 430, 652
BstDEI CTNAG 6 cut(s) 129, 140, 171, 264, 521, 1154
BstDSI CCRYGG 3 cut(s) 188, 744, 1104
BstF5I GGATG 2 cut(s) 325, 754
BstFNI CGCG 1 cut(s) 190
BstH2I RGCGCY 1 cut(s) 83
BstHHI GCGC 2 cut(s) 82, 212
BstKTI GATC 4 cut(s) 252, 605, 915, 1176
BstMBI GATC 4 cut(s) 249, 602, 912, 1173
BstMCI CGRYCG 2 cut(s) 44, 68
BstMWI GCNNNNNNNGC 6 cut(s) 77, 133, 173, 450, 1136, 1158
BstNI CCWGG 5 cut(s) 23, 181, 309, 777, 1136
BstSCI CCNGG 6 cut(s) 21, 38, 179, 307, 775, 1134
BstSLI GKGCMC 1 cut(s) 121
BstUI CGCG 1 cut(s) 190
BstV1I GCAGC 9 cut(s) 58, 98, 222, 316, 412, 510, 513, 577, 1170
Bsu36I CCTNAGG 1 cut(s) 129
BsuRI GGCC 5 cut(s) 176, 184, 886, 893, 1048
BtgI CCRYGG 3 cut(s) 188, 744, 1104
BtsCI GGATG 2 cut(s) 325, 754
BtsIMutI CAGTG 3 cut(s) 669, 962, 1005
BveI ACCTGC 1 cut(s) 458
Cac8I GCNNGC 4 cut(s) 208, 240, 430, 652
CfoI GCGC 2 cut(s) 82, 212
Cfr10I RCCGGY 1 cut(s) 63
Cfr13I GGNCC 7 cut(s) 61, 311, 643, 722, 884, 1037, 1046
Cfr42I CCGCGG 1 cut(s) 191
CseI GACGC 1 cut(s) 187
Csp6I GTAC 3 cut(s) 711, 816, 1117
CspAI ACCGGT 1 cut(s) 63
CspCI CAANNNNNGTGG 2 cut(s) 558, 593
CviAII CATG 7 cut(s) 28, 392, 745, 868, 944, 977, 1105
CviQI GTAC 3 cut(s) 711, 816, 1117
DdeI CTNAG 6 cut(s) 129, 140, 171, 264, 521, 1154
DinI GGCGCC 1 cut(s) 81
DpnI GATC 4 cut(s) 251, 604, 914, 1175
DpnII GATC 4 cut(s) 249, 602, 912, 1173
EaeI YGGCCR 2 cut(s) 182, 891
Eam1104I CTCTTC 1 cut(s) 188
EarI CTCTTC 1 cut(s) 188
Ecl136II GAGCTC 1 cut(s) 268
Eco130I CCWWGG 7 cut(s) 314, 638, 725, 744, 880, 935, 1104
Eco24I GRGCYC 1 cut(s) 270
Eco47I GGWCC 5 cut(s) 61, 311, 643, 722, 1037
Eco53kI GAGCTC 1 cut(s) 268
Eco57I CTGAAG 1 cut(s) 981
Eco81I CCTNAGG 1 cut(s) 129
EcoICRI GAGCTC 1 cut(s) 268
EcoO109I RGGNCCY 2 cut(s) 643, 884
EcoRII CCWGG 5 cut(s) 21, 179, 307, 775, 1134
EcoT14I CCWWGG 7 cut(s) 314, 638, 725, 744, 880, 935, 1104
EcoT22I ATGCAT 1 cut(s) 397
EcoT38I GRGCYC 1 cut(s) 270
EgeI GGCGCC 1 cut(s) 81
EheI GGCGCC 1 cut(s) 81
ErhI CCWWGG 7 cut(s) 314, 638, 725, 744, 880, 935, 1104
FaeI CATG 7 cut(s) 31, 395, 748, 871, 947, 980, 1108
FalI AAGNNNNNCTT 2 cut(s) 269, 301
FaqI GGGAC 2 cut(s) 629, 820
FatI CATG 7 cut(s) 27, 391, 744, 867, 943, 976, 1104
FauI CCCGC 1 cut(s) 42
FauNDI CATATG 1 cut(s) 679
FokI GGATG 2 cut(s) 332, 761
FriOI GRGCYC 1 cut(s) 270
FspBI CTAG 4 cut(s) 609, 614, 639, 881
GlaI GCGC 2 cut(s) 81, 211
GsaI CCCAGC 2 cut(s) 118, 1047
GsuI CTGGAG 3 cut(s) 250, 798, 938
HaeII RGCGCY 1 cut(s) 83
HaeIII GGCC 5 cut(s) 176, 184, 886, 893, 1048
HapII CCGG 6 cut(s) 40, 64, 83, 213, 223, 273
HgaI GACGC 1 cut(s) 187
HhaI GCGC 2 cut(s) 82, 212
Hin1I GRCGYC 1 cut(s) 80
Hin1II CATG 7 cut(s) 31, 395, 748, 871, 947, 980, 1108
Hin6I GCGC 2 cut(s) 80, 210
HinP1I GCGC 2 cut(s) 80, 210
HinfI GANTC 2 cut(s) 95, 769
HpaII CCGG 6 cut(s) 40, 64, 83, 213, 223, 273
HphI GGTGA 6 cut(s) 112, 274, 491, 541, 627, 922
Hpy166II GTNNAC 3 cut(s) 549, 591, 1101
Hpy188I TCNGA 1 cut(s) 172
Hpy188III TCNNGA 5 cut(s) 59, 131, 273, 702, 1028
Hpy8I GTNNAC 3 cut(s) 549, 591, 1101
Hpy99I CGWCG 2 cut(s) 203, 206
HpyAV CCTTC 2 cut(s) 848, 897
HpyCH4III ACNGT 2 cut(s) 333, 991
HpyCH4V TGCA 4 cut(s) 395, 453, 736, 741
HpyF10VI GCNNNNNNNGC 6 cut(s) 77, 133, 173, 450, 1136, 1158
HpyF3I CTNAG 6 cut(s) 129, 140, 171, 264, 521, 1154
Hsp92I GRCGYC 1 cut(s) 80
Hsp92II CATG 7 cut(s) 31, 395, 748, 871, 947, 980, 1108
HspAI GCGC 2 cut(s) 80, 210
KasI GGCGCC 1 cut(s) 79
KflI GGGWCCC 1 cut(s) 643
Kpn2I TCCGGA 1 cut(s) 272
KpnI GGTACC 1 cut(s) 1120
KspI CCGCGG 1 cut(s) 191
Kzo9I GATC 4 cut(s) 249, 602, 912, 1173
LguI GCTCTTC 1 cut(s) 188
LmnI GCTCC 5 cut(s) 12, 133, 225, 581, 937
Lsp1109I GCAGC 9 cut(s) 58, 98, 222, 316, 412, 510, 513, 577, 1170
LweI GCATC 1 cut(s) 114
MaeI CTAG 4 cut(s) 609, 614, 639, 881
MaeIII GTNAC 1 cut(s) 985
MalI GATC 4 cut(s) 251, 604, 914, 1175
MbiI CCGCTC 1 cut(s) 354
MboI GATC 4 cut(s) 249, 602, 912, 1173
MboII GAAGA 2 cut(s) 205, 1072
MhlI GDGCHC 3 cut(s) 121, 270, 1056
MluCI AATT 4 cut(s) 159, 529, 619, 1073
Mly113I GGCGCC 1 cut(s) 80
MlyI GAGTC 1 cut(s) 89
Mph1103I ATGCAT 1 cut(s) 397
MroI TCCGGA 1 cut(s) 272
MseI TTAA 4 cut(s) 17, 255, 300, 398
MspA1I CMGCKG 3 cut(s) 49, 190, 1043
MspI CCGG 6 cut(s) 40, 64, 83, 213, 223, 273
MspR9I CCNGG 6 cut(s) 23, 40, 181, 309, 777, 1136
Mva1269I GAATGC 3 cut(s) 738, 753, 1130
MvaI CCWGG 5 cut(s) 23, 181, 309, 777, 1136
MvnI CGCG 1 cut(s) 190
MwoI GCNNNNNNNGC 6 cut(s) 77, 133, 173, 450, 1136, 1158
NarI GGCGCC 1 cut(s) 80
NciI CCSGG 1 cut(s) 40
NcoI CCATGG 2 cut(s) 744, 1104
NdeI CATATG 1 cut(s) 679
NdeII GATC 4 cut(s) 249, 602, 912, 1173
NlaIII CATG 7 cut(s) 31, 395, 748, 871, 947, 980, 1108
NlaIV GGNNCC 9 cut(s) 81, 350, 541, 583, 644, 645, 700, 723, 1118
NmeAIII GCCGAG 1 cut(s) 847
NsiI ATGCAT 1 cut(s) 397
NspV TTCGAA 1 cut(s) 854
PaqCI CACCTGC 1 cut(s) 458
PciSI GCTCTTC 1 cut(s) 188
PctI GAATGC 3 cut(s) 738, 753, 1130
PfeI GAWTC 1 cut(s) 769
PflMI CCANNNNNTGG 1 cut(s) 905
PfoI TCCNGGA 1 cut(s) 21
PinAI ACCGGT 1 cut(s) 63
PleI GAGTC 1 cut(s) 89
PluTI GGCGCC 1 cut(s) 83
PpsI GAGTC 1 cut(s) 89
PpuMI RGGWCCY 1 cut(s) 643
PsiI TTATAA 1 cut(s) 341
Psp124BI GAGCTC 1 cut(s) 270
Psp5II RGGWCCY 1 cut(s) 643
Psp6I CCWGG 5 cut(s) 21, 179, 307, 775, 1134
PspFI CCCAGC 2 cut(s) 114, 1043
PspGI CCWGG 5 cut(s) 21, 179, 307, 775, 1134
PspN4I GGNNCC 9 cut(s) 81, 350, 541, 583, 644, 645, 700, 723, 1118
PspPI GGNCC 7 cut(s) 61, 311, 643, 722, 884, 1037, 1046
PspPPI RGGWCCY 1 cut(s) 643
PvuII CAGCTG 1 cut(s) 1043
RsaI GTAC 3 cut(s) 712, 817, 1118
RsaNI GTAC 3 cut(s) 711, 816, 1117
SacI GAGCTC 1 cut(s) 270
SacII CCGCGG 1 cut(s) 191
SapI GCTCTTC 1 cut(s) 188
SaqAI TTAA 4 cut(s) 17, 255, 300, 398
Sau3AI GATC 4 cut(s) 249, 602, 912, 1173
Sau96I GGNCC 7 cut(s) 61, 311, 643, 722, 884, 1037, 1046
ScaI AGTACT 1 cut(s) 817
SchI GAGTC 1 cut(s) 89
ScrFI CCNGG 6 cut(s) 23, 40, 181, 309, 777, 1136
SduI GDGCHC 3 cut(s) 121, 270, 1056
SfaNI GCATC 1 cut(s) 114
SfoI GGCGCC 1 cut(s) 81
Sfr303I CCGCGG 1 cut(s) 191
SfuI TTCGAA 1 cut(s) 854
SgrBI CCGCGG 1 cut(s) 191
SinI GGWCC 5 cut(s) 61, 311, 643, 722, 1037
Sse9I AATT 4 cut(s) 159, 529, 619, 1073
SsiI CCGC 8 cut(s) 49, 71, 77, 177, 185, 188, 190, 352
SspDI GGCGCC 1 cut(s) 79
SspMI CTAG 4 cut(s) 609, 614, 639, 881
SstI GAGCTC 1 cut(s) 270
StyD4I CCNGG 6 cut(s) 21, 38, 179, 307, 775, 1134
StyI CCWWGG 7 cut(s) 314, 638, 725, 744, 880, 935, 1104
TaaI ACNGT 2 cut(s) 333, 991
TaqI TCGA 2 cut(s) 601, 854
TasI AATT 4 cut(s) 159, 529, 619, 1073
TatI WGTACW 1 cut(s) 815
TauI GCSGC 4 cut(s) 80, 179, 187, 190
TfiI GAWTC 1 cut(s) 769
Tru1I TTAA 4 cut(s) 17, 255, 300, 398
Tru9I TTAA 4 cut(s) 17, 255, 300, 398
TscAI CASTG 3 cut(s) 669, 962, 1005
TseI GCWGC 9 cut(s) 46, 111, 235, 304, 425, 498, 501, 565, 1158
TspDTI ATGAA 5 cut(s) 336, 498, 666, 960, 965
TspGWI ACGGA 4 cut(s) 25, 286, 822, 839
TspRI CASTG 3 cut(s) 669, 962, 1005
Van91I CCANNNNNTGG 1 cut(s) 905
VpaK11BI GGWCC 5 cut(s) 61, 311, 643, 722, 1037
XapI RAATTY 2 cut(s) 529, 619
XmaJI CCTAGG 2 cut(s) 638, 880
XspI CTAG 4 cut(s) 609, 614, 639, 881
ZrmI AGTACT 1 cut(s) 817
Zsp2I ATGCAT 1 cut(s) 397
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.