Transcription factor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Myb_DNA-binding | PF00249 | 10 - 57 | 4.5e-15 | Myb-like DNA-binding domain |
| Myb_DNA-bind_6 | PF13921 | 13 - 70 | 1.7e-10 | Myb-like DNA-binding domain |
| Myb_DNA-binding | PF00249 | 63 - 108 | 2e-15 | Myb-like DNA-binding domain |
| Myb_DNA-bind_6 | PF13921 | 68 - 114 | 2.8e-07 | Myb-like DNA-binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 148 |
| AciI | CCGC | 1 cut(s) | 288 |
| AclWI | GGATC | 1 cut(s) | 429 |
| AcsI | RAATTY | 1 cut(s) | 616 |
| AcuI | CTGAAG | 2 cut(s) | 66, 678 |
| AflIII | ACRYGT | 1 cut(s) | 545 |
| AgeI | ACCGGT | 1 cut(s) | 397 |
| AgsI | TTSAA | 3 cut(s) | 163, 172, 740 |
| AjnI | CCWGG | 1 cut(s) | 277 |
| AluBI | AGCT | 4 cut(s) | 119, 238, 641, 671 |
| AluI | AGCT | 4 cut(s) | 119, 238, 641, 671 |
| Alw26I | GTCTC | 2 cut(s) | 62, 725 |
| AlwI | GGATC | 1 cut(s) | 429 |
| AoxI | GGCC | 1 cut(s) | 681 |
| ApeKI | GCWGC | 1 cut(s) | 459 |
| ApoI | RAATTY | 1 cut(s) | 616 |
| AsiGI | ACCGGT | 1 cut(s) | 397 |
| AspS9I | GGNCC | 4 cut(s) | 255, 285, 400, 681 |
| AvaII | GGWCC | 3 cut(s) | 255, 285, 400 |
| BbsI | GAAGAC | 2 cut(s) | 199, 333 |
| BbvI | GCAGC | 1 cut(s) | 471 |
| BccI | CCATC | 4 cut(s) | 150, 327, 471, 719 |
| BciT130I | CCWGG | 1 cut(s) | 279 |
| BcoDI | GTCTC | 2 cut(s) | 62, 725 |
| BfaI | CTAG | 1 cut(s) | 242 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 689 |
| BisI | GCNGC | 1 cut(s) | 460 |
| BlsI | GCNGC | 1 cut(s) | 461 |
| Bme1390I | CCNGG | 1 cut(s) | 279 |
| Bme18I | GGWCC | 3 cut(s) | 255, 285, 400 |
| BmgT120I | GGNCC | 4 cut(s) | 255, 285, 400, 681 |
| BmiI | GGNNCC | 1 cut(s) | 682 |
| BmrFI | CCNGG | 1 cut(s) | 279 |
| BmrI | ACTGGG | 1 cut(s) | 632 |
| BmsI | GCATC | 3 cut(s) | 109, 122, 634 |
| BmuI | ACTGGG | 1 cut(s) | 632 |
| BpiI | GAAGAC | 2 cut(s) | 199, 333 |
| BpuEI | CTTGAG | 2 cut(s) | 82, 497 |
| Bsa29I | ATCGAT | 1 cut(s) | 130 |
| BsaJI | CCNNGG | 1 cut(s) | 505 |
| BsaWI | WCCGGW | 1 cut(s) | 397 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 26, 720, 750 |
| Bse118I | RCCGGY | 1 cut(s) | 397 |
| Bse1I | ACTGG | 2 cut(s) | 314, 627 |
| Bse3DI | GCAATG | 1 cut(s) | 208 |
| BseBI | CCWGG | 1 cut(s) | 279 |
| BseCI | ATCGAT | 1 cut(s) | 130 |
| BseDI | CCNNGG | 1 cut(s) | 505 |
| BseMI | GCAATG | 1 cut(s) | 208 |
| BseMII | CTCAG | 1 cut(s) | 314 |
| BseNI | ACTGG | 2 cut(s) | 314, 627 |
| BseXI | GCAGC | 1 cut(s) | 471 |
| BseYI | CCCAGC | 1 cut(s) | 119 |
| BshFI | GGCC | 1 cut(s) | 683 |
| BshTI | ACCGGT | 1 cut(s) | 397 |
| BshVI | ATCGAT | 1 cut(s) | 130 |
| BsiSI | CCGG | 1 cut(s) | 398 |
| BsmAI | GTCTC | 2 cut(s) | 62, 725 |
| BsnI | GGCC | 1 cut(s) | 683 |
| Bsp143I | GATC | 2 cut(s) | 214, 434 |
| BspACI | CCGC | 1 cut(s) | 288 |
| BspANI | GGCC | 1 cut(s) | 683 |
| BspCNI | CTCAG | 1 cut(s) | 315 |
| BspDI | ATCGAT | 1 cut(s) | 130 |
| BspLI | GGNNCC | 1 cut(s) | 682 |
| BspPI | GGATC | 1 cut(s) | 429 |
| BsrDI | GCAATG | 1 cut(s) | 208 |
| BsrFI | RCCGGY | 1 cut(s) | 397 |
| BsrI | ACTGG | 2 cut(s) | 314, 627 |
| BssAI | RCCGGY | 1 cut(s) | 397 |
| BssECI | CCNNGG | 1 cut(s) | 505 |
| BssMI | GATC | 2 cut(s) | 214, 434 |
| BssT1I | CCWWGG | 1 cut(s) | 505 |
| Bst2UI | CCWGG | 1 cut(s) | 279 |
| Bst4CI | ACNGT | 1 cut(s) | 736 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 41 |
| BstDEI | CTNAG | 3 cut(s) | 152, 197, 323 |
| BstKTI | GATC | 2 cut(s) | 217, 437 |
| BstMAI | GTCTC | 2 cut(s) | 62, 725 |
| BstMBI | GATC | 2 cut(s) | 214, 434 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 41, 668, 689 |
| BstNI | CCWGG | 1 cut(s) | 279 |
| BstNSI | RCATGY | 1 cut(s) | 549 |
| BstSCI | CCNGG | 1 cut(s) | 277 |
| BstV1I | GCAGC | 1 cut(s) | 471 |
| BstV2I | GAAGAC | 2 cut(s) | 199, 333 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 470 |
| Bsu15I | ATCGAT | 1 cut(s) | 130 |
| BsuRI | GGCC | 1 cut(s) | 683 |
| BsuTUI | ATCGAT | 1 cut(s) | 130 |
| Cfr10I | RCCGGY | 1 cut(s) | 397 |
| Cfr13I | GGNCC | 4 cut(s) | 255, 285, 400, 681 |
| ClaI | ATCGAT | 1 cut(s) | 130 |
| CpoI | CGGWCCG | 1 cut(s) | 285 |
| CspAI | ACCGGT | 1 cut(s) | 397 |
| CspI | CGGWCCG | 1 cut(s) | 285 |
| CviAII | CATG | 5 cut(s) | 36, 335, 501, 546, 677 |
| DdeI | CTNAG | 3 cut(s) | 152, 197, 323 |
| DpnI | GATC | 2 cut(s) | 216, 436 |
| DpnII | GATC | 2 cut(s) | 214, 434 |
| Eco130I | CCWWGG | 1 cut(s) | 505 |
| Eco47I | GGWCC | 3 cut(s) | 255, 285, 400 |
| Eco57I | CTGAAG | 2 cut(s) | 66, 678 |
| EcoRII | CCWGG | 1 cut(s) | 277 |
| EcoT14I | CCWWGG | 1 cut(s) | 505 |
| ErhI | CCWWGG | 1 cut(s) | 505 |
| FaeI | CATG | 5 cut(s) | 39, 338, 504, 549, 680 |
| FaiI | YATR | 9 cut(s) | 37, 70, 84, 234, 336, 502, 547, 605, 678 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 201, 233 |
| FatI | CATG | 5 cut(s) | 35, 334, 500, 545, 676 |
| FblI | GTMKAC | 1 cut(s) | 148 |
| Fnu4HI | GCNGC | 1 cut(s) | 460 |
| Fsp4HI | GCNGC | 1 cut(s) | 460 |
| FspBI | CTAG | 1 cut(s) | 242 |
| GluI | GCNGC | 1 cut(s) | 460 |
| GsaI | CCCAGC | 1 cut(s) | 123 |
| HaeIII | GGCC | 1 cut(s) | 683 |
| HapII | CCGG | 1 cut(s) | 398 |
| Hin1II | CATG | 5 cut(s) | 39, 338, 504, 549, 680 |
| HincII | GTYRAC | 1 cut(s) | 448 |
| HindII | GTYRAC | 1 cut(s) | 448 |
| HindIII | AAGCTT | 1 cut(s) | 236 |
| HinfI | GANTC | 3 cut(s) | 338, 510, 715 |
| HpaI | GTTAAC | 1 cut(s) | 448 |
| HpaII | CCGG | 1 cut(s) | 398 |
| Hpy166II | GTNNAC | 2 cut(s) | 149, 448 |
| Hpy188I | TCNGA | 2 cut(s) | 285, 324 |
| Hpy188III | TCNNGA | 4 cut(s) | 61, 184, 514, 656 |
| Hpy8I | GTNNAC | 2 cut(s) | 149, 448 |
| Hpy99I | CGWCG | 1 cut(s) | 667 |
| HpyAV | CCTTC | 4 cut(s) | 83, 239, 448, 507 |
| HpyCH4III | ACNGT | 1 cut(s) | 736 |
| HpyCH4IV | ACGT | 1 cut(s) | 699 |
| HpyCH4V | TGCA | 3 cut(s) | 35, 135, 459 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 41, 668, 689 |
| HpyF3I | CTNAG | 3 cut(s) | 152, 197, 323 |
| HpySE526I | ACGT | 1 cut(s) | 699 |
| Hsp92II | CATG | 5 cut(s) | 39, 338, 504, 549, 680 |
| KspAI | GTTAAC | 1 cut(s) | 448 |
| Kzo9I | GATC | 2 cut(s) | 214, 434 |
| LpnPI | CCDG | 9 cut(s) | 105, 252, 264, 291, 295, 411, 492, 608, 669 |
| Lsp1109I | GCAGC | 1 cut(s) | 471 |
| LweI | GCATC | 3 cut(s) | 109, 122, 634 |
| MaeI | CTAG | 1 cut(s) | 242 |
| MaeII | ACGT | 1 cut(s) | 699 |
| MaeIII | GTNAC | 1 cut(s) | 548 |
| MalI | GATC | 2 cut(s) | 216, 436 |
| MboI | GATC | 2 cut(s) | 214, 434 |
| MboII | GAAGA | 7 cut(s) | 59, 62, 204, 209, 212, 215, 333 |
| MluCI | AATT | 3 cut(s) | 304, 492, 616 |
| MlyI | GAGTC | 3 cut(s) | 347, 504, 724 |
| MmeI | TCCRAC | 2 cut(s) | 263, 591 |
| MnlI | CCTC | 6 cut(s) | 18, 57, 182, 396, 435, 441 |
| MseI | TTAA | 3 cut(s) | 420, 447, 491 |
| MslI | CAYNNNNRTG | 1 cut(s) | 468 |
| MspA1I | CMGCKG | 1 cut(s) | 671 |
| MspI | CCGG | 1 cut(s) | 398 |
| MspR9I | CCNGG | 1 cut(s) | 279 |
| MvaI | CCWGG | 1 cut(s) | 279 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 41, 668, 689 |
| NdeII | GATC | 2 cut(s) | 214, 434 |
| NlaIII | CATG | 5 cut(s) | 39, 338, 504, 549, 680 |
| NlaIV | GGNNCC | 1 cut(s) | 682 |
| NspI | RCATGY | 1 cut(s) | 549 |
| PciI | ACATGT | 1 cut(s) | 545 |
| PinAI | ACCGGT | 1 cut(s) | 397 |
| PkrI | GCNGC | 1 cut(s) | 461 |
| PleI | GAGTC | 3 cut(s) | 346, 504, 723 |
| PpsI | GAGTC | 3 cut(s) | 346, 504, 723 |
| PscI | ACATGT | 1 cut(s) | 545 |
| Psp6I | CCWGG | 1 cut(s) | 277 |
| PspFI | CCCAGC | 1 cut(s) | 119 |
| PspGI | CCWGG | 1 cut(s) | 277 |
| PspN4I | GGNNCC | 1 cut(s) | 682 |
| PspPI | GGNCC | 4 cut(s) | 255, 285, 400, 681 |
| PvuII | CAGCTG | 1 cut(s) | 671 |
| RseI | CAYNNNNRTG | 1 cut(s) | 468 |
| Rsr2I | CGGWCCG | 1 cut(s) | 285 |
| RsrII | CGGWCCG | 1 cut(s) | 285 |
| SaqAI | TTAA | 3 cut(s) | 420, 447, 491 |
| SatI | GCNGC | 1 cut(s) | 460 |
| Sau3AI | GATC | 2 cut(s) | 214, 434 |
| Sau96I | GGNCC | 4 cut(s) | 255, 285, 400, 681 |
| SchI | GAGTC | 3 cut(s) | 347, 504, 724 |
| ScrFI | CCNGG | 1 cut(s) | 279 |
| SetI | ASST | 8 cut(s) | 34, 121, 240, 254, 433, 643, 673, 702 |
| SfaNI | GCATC | 3 cut(s) | 109, 122, 634 |
| SinI | GGWCC | 3 cut(s) | 255, 285, 400 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 468 |
| SmlI | CTYRAG | 2 cut(s) | 61, 512 |
| SmoI | CTYRAG | 2 cut(s) | 61, 512 |
| Sse9I | AATT | 3 cut(s) | 304, 492, 616 |
| SsiI | CCGC | 1 cut(s) | 288 |
| SspMI | CTAG | 1 cut(s) | 242 |
| StyD4I | CCNGG | 1 cut(s) | 277 |
| StyI | CCWWGG | 1 cut(s) | 505 |
| TaaI | ACNGT | 1 cut(s) | 736 |
| TaiI | ACGT | 1 cut(s) | 702 |
| TaqI | TCGA | 4 cut(s) | 130, 271, 427, 433 |
| TasI | AATT | 3 cut(s) | 304, 492, 616 |
| Tru1I | TTAA | 3 cut(s) | 420, 447, 491 |
| Tru9I | TTAA | 3 cut(s) | 420, 447, 491 |
| TseI | GCWGC | 1 cut(s) | 459 |
| TspDTI | ATGAA | 5 cut(s) | 221, 222, 377, 489, 605 |
| VpaK11BI | GGWCC | 3 cut(s) | 255, 285, 400 |
| XapI | RAATTY | 1 cut(s) | 616 |
| XceI | RCATGY | 1 cut(s) | 549 |
| XmiI | GTMKAC | 1 cut(s) | 148 |
| XspI | CTAG | 1 cut(s) | 242 |