Transcription factor
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 219 |
| AcsI | RAATTY | 1 cut(s) | 179 |
| AcuI | CTGAAG | 1 cut(s) | 176 |
| AgsI | TTSAA | 3 cut(s) | 62, 148, 185 |
| AluBI | AGCT | 3 cut(s) | 129, 214, 223 |
| AluI | AGCT | 3 cut(s) | 129, 214, 223 |
| ApoI | RAATTY | 1 cut(s) | 179 |
| AspS9I | GGNCC | 1 cut(s) | 24 |
| AvaII | GGWCC | 1 cut(s) | 24 |
| BccI | CCATC | 2 cut(s) | 75, 173 |
| BfmI | CTRYAG | 1 cut(s) | 130 |
| Bme18I | GGWCC | 1 cut(s) | 24 |
| BmgT120I | GGNCC | 1 cut(s) | 24 |
| BmsI | GCATC | 1 cut(s) | 107 |
| Bsa29I | ATCGAT | 1 cut(s) | 259 |
| BseCI | ATCGAT | 1 cut(s) | 259 |
| BseMII | CTCAG | 1 cut(s) | 61 |
| BseRI | GAGGAG | 1 cut(s) | 189 |
| BshVI | ATCGAT | 1 cut(s) | 259 |
| Bsp143I | GATC | 2 cut(s) | 37, 199 |
| BspCNI | CTCAG | 1 cut(s) | 60 |
| BspDI | ATCGAT | 1 cut(s) | 259 |
| BssMI | GATC | 2 cut(s) | 37, 199 |
| BstC8I | GCNNGC | 1 cut(s) | 106 |
| BstDEI | CTNAG | 1 cut(s) | 47 |
| BstKTI | GATC | 2 cut(s) | 40, 202 |
| BstMBI | GATC | 2 cut(s) | 37, 199 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 126, 220 |
| BstSFI | CTRYAG | 1 cut(s) | 130 |
| Bsu15I | ATCGAT | 1 cut(s) | 259 |
| BsuTUI | ATCGAT | 1 cut(s) | 259 |
| Cac8I | GCNNGC | 1 cut(s) | 106 |
| Cfr13I | GGNCC | 1 cut(s) | 24 |
| ClaI | ATCGAT | 1 cut(s) | 259 |
| CviAII | CATG | 1 cut(s) | 21 |
| CviJI | RGCY | 5 cut(s) | 108, 129, 160, 214, 223 |
| CviKI_1 | RGCY | 5 cut(s) | 108, 129, 160, 214, 223 |
| DdeI | CTNAG | 1 cut(s) | 47 |
| DpnI | GATC | 2 cut(s) | 39, 201 |
| DpnII | GATC | 2 cut(s) | 37, 199 |
| Eco47I | GGWCC | 1 cut(s) | 24 |
| Eco57I | CTGAAG | 1 cut(s) | 176 |
| EcoT22I | ATGCAT | 1 cut(s) | 59 |
| FaeI | CATG | 1 cut(s) | 24 |
| FaiI | YATR | 4 cut(s) | 22, 219, 249, 270 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 27, 59 |
| FatI | CATG | 1 cut(s) | 20 |
| Hin1II | CATG | 1 cut(s) | 24 |
| HindIII | AAGCTT | 2 cut(s) | 212, 221 |
| HinfI | GANTC | 1 cut(s) | 91 |
| Hpy188I | TCNGA | 1 cut(s) | 204 |
| Hpy188III | TCNNGA | 2 cut(s) | 49, 169 |
| HpyAV | CCTTC | 1 cut(s) | 68 |
| HpyCH4IV | ACGT | 1 cut(s) | 67 |
| HpyCH4V | TGCA | 3 cut(s) | 20, 57, 120 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 126, 220 |
| HpyF3I | CTNAG | 1 cut(s) | 47 |
| HpySE526I | ACGT | 1 cut(s) | 67 |
| Hsp92II | CATG | 1 cut(s) | 24 |
| Kzo9I | GATC | 2 cut(s) | 37, 199 |
| LpnPI | CCDG | 4 cut(s) | 34, 90, 167, 220 |
| LweI | GCATC | 1 cut(s) | 107 |
| MaeII | ACGT | 1 cut(s) | 67 |
| MalI | GATC | 2 cut(s) | 39, 201 |
| MboI | GATC | 2 cut(s) | 37, 199 |
| MboII | GAAGA | 4 cut(s) | 35, 47, 90, 197 |
| MluCI | AATT | 1 cut(s) | 179 |
| MnlI | CCTC | 4 cut(s) | 25, 105, 132, 167 |
| Mph1103I | ATGCAT | 1 cut(s) | 59 |
| MseI | TTAA | 2 cut(s) | 110, 210 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 126, 220 |
| NdeII | GATC | 2 cut(s) | 37, 199 |
| NlaIII | CATG | 1 cut(s) | 24 |
| NsiI | ATGCAT | 1 cut(s) | 59 |
| PfeI | GAWTC | 1 cut(s) | 91 |
| PsiI | TTATAA | 1 cut(s) | 219 |
| PspPI | GGNCC | 1 cut(s) | 24 |
| SaqAI | TTAA | 2 cut(s) | 110, 210 |
| Sau3AI | GATC | 2 cut(s) | 37, 199 |
| Sau96I | GGNCC | 1 cut(s) | 24 |
| SetI | ASST | 7 cut(s) | 19, 70, 131, 143, 156, 216, 225 |
| SfaNI | GCATC | 1 cut(s) | 107 |
| SfcI | CTRYAG | 1 cut(s) | 130 |
| SinI | GGWCC | 1 cut(s) | 24 |
| Sse9I | AATT | 1 cut(s) | 179 |
| TaiI | ACGT | 1 cut(s) | 70 |
| TaqI | TCGA | 2 cut(s) | 198, 259 |
| TasI | AATT | 1 cut(s) | 179 |
| TfiI | GAWTC | 1 cut(s) | 91 |
| Tru1I | TTAA | 2 cut(s) | 110, 210 |
| Tru9I | TTAA | 2 cut(s) | 110, 210 |
| TspDTI | ATGAA | 1 cut(s) | 207 |
| VpaK11BI | GGWCC | 1 cut(s) | 24 |
| XapI | RAATTY | 1 cut(s) | 179 |
| Zsp2I | ATGCAT | 1 cut(s) | 59 |