Transcription factor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Myb_DNA-binding | PF00249 | 10 - 57 | 7.3e-16 | Myb-like DNA-binding domain |
| Myb_DNA-bind_6 | PF13921 | 13 - 69 | 5.6e-11 | Myb-like DNA-binding domain |
| Myb_DNA-binding | PF00249 | 63 - 108 | 3.2e-15 | Myb-like DNA-binding domain |
| Myb_DNA-bind_6 | PF13921 | 67 - 110 | 4.5e-07 | Myb-like DNA-binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 417 |
| AatII | GACGTC | 1 cut(s) | 300 |
| AccB1I | GGYRCC | 1 cut(s) | 99 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 503 |
| AciI | CCGC | 1 cut(s) | 288 |
| AclWI | GGATC | 1 cut(s) | 426 |
| AcsI | RAATTY | 2 cut(s) | 614, 737 |
| AcuI | CTGAAG | 2 cut(s) | 66, 675 |
| AcyI | GRCGYC | 1 cut(s) | 297 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 503 |
| AgeI | ACCGGT | 1 cut(s) | 129 |
| AgsI | TTSAA | 2 cut(s) | 163, 172 |
| AhlI | ACTAGT | 1 cut(s) | 571 |
| AjnI | CCWGG | 1 cut(s) | 277 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 19, 51 |
| AluBI | AGCT | 2 cut(s) | 119, 201 |
| AluI | AGCT | 2 cut(s) | 119, 201 |
| Alw26I | GTCTC | 4 cut(s) | 58, 62, 363, 722 |
| AlwI | GGATC | 1 cut(s) | 426 |
| ApeKI | GCWGC | 1 cut(s) | 22 |
| ApoI | RAATTY | 2 cut(s) | 614, 737 |
| AseI | ATTAAT | 1 cut(s) | 75 |
| AsiGI | ACCGGT | 1 cut(s) | 129 |
| AspS9I | GGNCC | 1 cut(s) | 285 |
| AvaII | GGWCC | 1 cut(s) | 285 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 520, 553 |
| BanI | GGYRCC | 1 cut(s) | 99 |
| BbvI | GCAGC | 1 cut(s) | 9 |
| BccI | CCATC | 4 cut(s) | 150, 468, 584, 716 |
| BciT130I | CCWGG | 1 cut(s) | 279 |
| BclI | TGATCA | 1 cut(s) | 700 |
| BcoDI | GTCTC | 4 cut(s) | 58, 62, 363, 722 |
| BcuI | ACTAGT | 1 cut(s) | 571 |
| BfaI | CTAG | 3 cut(s) | 242, 572, 620 |
| BisI | GCNGC | 1 cut(s) | 23 |
| BlsI | GCNGC | 1 cut(s) | 24 |
| Bme1390I | CCNGG | 1 cut(s) | 279 |
| Bme18I | GGWCC | 1 cut(s) | 285 |
| BmgT120I | GGNCC | 1 cut(s) | 285 |
| BmiI | GGNNCC | 2 cut(s) | 101, 651 |
| BmrFI | CCNGG | 1 cut(s) | 279 |
| BpuEI | CTTGAG | 1 cut(s) | 82 |
| BsaHI | GRCGYC | 1 cut(s) | 297 |
| BsaJI | CCNNGG | 2 cut(s) | 502, 684 |
| BsaWI | WCCGGW | 1 cut(s) | 129 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 26, 717, 747 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 503 |
| Bse118I | RCCGGY | 2 cut(s) | 129, 394 |
| Bse1I | ACTGG | 1 cut(s) | 314 |
| BseBI | CCWGG | 1 cut(s) | 279 |
| BseDI | CCNNGG | 2 cut(s) | 502, 684 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 503 |
| BseMII | CTCAG | 1 cut(s) | 314 |
| BseNI | ACTGG | 1 cut(s) | 314 |
| BseXI | GCAGC | 1 cut(s) | 9 |
| BseYI | CCCAGC | 1 cut(s) | 119 |
| BsgI | GTGCAG | 1 cut(s) | 154 |
| BshNI | GGYRCC | 1 cut(s) | 99 |
| BshTI | ACCGGT | 1 cut(s) | 129 |
| BsiSI | CCGG | 2 cut(s) | 130, 395 |
| BslFI | GGGAC | 1 cut(s) | 692 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 503 |
| BsmAI | GTCTC | 4 cut(s) | 58, 62, 363, 722 |
| BsmFI | GGGAC | 1 cut(s) | 692 |
| Bsp143I | GATC | 3 cut(s) | 214, 431, 700 |
| BspACI | CCGC | 1 cut(s) | 288 |
| BspCNI | CTCAG | 1 cut(s) | 315 |
| BspLI | GGNNCC | 2 cut(s) | 101, 651 |
| BspPI | GGATC | 1 cut(s) | 426 |
| BspT107I | GGYRCC | 1 cut(s) | 99 |
| BsrFI | RCCGGY | 2 cut(s) | 129, 394 |
| BsrI | ACTGG | 1 cut(s) | 314 |
| BssAI | RCCGGY | 2 cut(s) | 129, 394 |
| BssECI | CCNNGG | 2 cut(s) | 502, 684 |
| BssMI | GATC | 3 cut(s) | 214, 431, 700 |
| BssNI | GRCGYC | 1 cut(s) | 297 |
| BssT1I | CCWWGG | 2 cut(s) | 502, 684 |
| Bst2UI | CCWGG | 1 cut(s) | 279 |
| Bst4CI | ACNGT | 4 cut(s) | 69, 342, 442, 733 |
| BstACI | GRCGYC | 1 cut(s) | 297 |
| BstDEI | CTNAG | 2 cut(s) | 197, 323 |
| BstKTI | GATC | 3 cut(s) | 217, 434, 703 |
| BstMAI | GTCTC | 4 cut(s) | 58, 62, 363, 722 |
| BstMBI | GATC | 3 cut(s) | 214, 431, 700 |
| BstNI | CCWGG | 1 cut(s) | 279 |
| BstSCI | CCNGG | 1 cut(s) | 277 |
| BstV1I | GCAGC | 1 cut(s) | 9 |
| BtsIMutI | CAGTG | 1 cut(s) | 74 |
| Cfr10I | RCCGGY | 2 cut(s) | 129, 394 |
| Cfr13I | GGNCC | 1 cut(s) | 285 |
| CpoI | CGGWCCG | 1 cut(s) | 285 |
| CsiI | ACCWGGT | 1 cut(s) | 277 |
| CspAI | ACCGGT | 1 cut(s) | 129 |
| CspI | CGGWCCG | 1 cut(s) | 285 |
| CviAII | CATG | 2 cut(s) | 335, 498 |
| CviJI | RGCY | 9 cut(s) | 22, 119, 124, 175, 201, 238, 421, 630, 689 |
| CviKI_1 | RGCY | 9 cut(s) | 22, 119, 124, 175, 201, 238, 421, 630, 689 |
| DdeI | CTNAG | 2 cut(s) | 197, 323 |
| DpnI | GATC | 3 cut(s) | 216, 433, 702 |
| DpnII | GATC | 3 cut(s) | 214, 431, 700 |
| Eco130I | CCWWGG | 2 cut(s) | 502, 684 |
| Eco47I | GGWCC | 1 cut(s) | 285 |
| Eco57I | CTGAAG | 2 cut(s) | 66, 675 |
| EcoRII | CCWGG | 1 cut(s) | 277 |
| EcoT14I | CCWWGG | 2 cut(s) | 502, 684 |
| ErhI | CCWWGG | 2 cut(s) | 502, 684 |
| FaeI | CATG | 2 cut(s) | 338, 501 |
| FaiI | YATR | 8 cut(s) | 84, 234, 336, 417, 499, 542, 544, 602 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 201, 233 |
| FaqI | GGGAC | 1 cut(s) | 692 |
| FatI | CATG | 2 cut(s) | 334, 497 |
| FbaI | TGATCA | 1 cut(s) | 700 |
| Fnu4HI | GCNGC | 1 cut(s) | 23 |
| Fsp4HI | GCNGC | 1 cut(s) | 23 |
| FspBI | CTAG | 3 cut(s) | 242, 572, 620 |
| GluI | GCNGC | 1 cut(s) | 23 |
| GsaI | CCCAGC | 1 cut(s) | 123 |
| HapII | CCGG | 2 cut(s) | 130, 395 |
| Hin1I | GRCGYC | 1 cut(s) | 297 |
| Hin1II | CATG | 2 cut(s) | 338, 501 |
| HincII | GTYRAC | 2 cut(s) | 445, 484 |
| HindII | GTYRAC | 2 cut(s) | 445, 484 |
| HinfI | GANTC | 1 cut(s) | 712 |
| HpaI | GTTAAC | 1 cut(s) | 445 |
| HpaII | CCGG | 2 cut(s) | 130, 395 |
| Hpy166II | GTNNAC | 2 cut(s) | 445, 484 |
| Hpy188I | TCNGA | 3 cut(s) | 205, 285, 324 |
| Hpy188III | TCNNGA | 4 cut(s) | 61, 184, 301, 653 |
| Hpy8I | GTNNAC | 2 cut(s) | 445, 484 |
| Hpy99I | CGWCG | 1 cut(s) | 664 |
| HpyAV | CCTTC | 3 cut(s) | 83, 239, 445 |
| HpyCH4III | ACNGT | 4 cut(s) | 69, 342, 442, 733 |
| HpyCH4IV | ACGT | 3 cut(s) | 297, 486, 696 |
| HpyCH4V | TGCA | 3 cut(s) | 72, 135, 456 |
| HpyF3I | CTNAG | 2 cut(s) | 197, 323 |
| HpySE526I | ACGT | 3 cut(s) | 297, 486, 696 |
| Hsp92I | GRCGYC | 1 cut(s) | 297 |
| Hsp92II | CATG | 2 cut(s) | 338, 501 |
| Ksp22I | TGATCA | 1 cut(s) | 700 |
| KspAI | GTTAAC | 1 cut(s) | 445 |
| Kzo9I | GATC | 3 cut(s) | 214, 431, 700 |
| Lsp1109I | GCAGC | 1 cut(s) | 9 |
| MabI | ACCWGGT | 1 cut(s) | 277 |
| MaeI | CTAG | 3 cut(s) | 242, 572, 620 |
| MaeII | ACGT | 3 cut(s) | 297, 486, 696 |
| MaeIII | GTNAC | 1 cut(s) | 527 |
| MalI | GATC | 3 cut(s) | 216, 433, 702 |
| MboI | GATC | 3 cut(s) | 214, 431, 700 |
| MboII | GAAGA | 7 cut(s) | 59, 62, 209, 212, 215, 282, 571 |
| MluCI | AATT | 5 cut(s) | 261, 304, 580, 614, 737 |
| MlyI | GAGTC | 1 cut(s) | 721 |
| MmeI | TCCRAC | 1 cut(s) | 263 |
| MnlI | CCTC | 6 cut(s) | 182, 432, 438, 504, 616, 628 |
| MseI | TTAA | 6 cut(s) | 75, 152, 260, 444, 489, 510 |
| MslI | CAYNNNNRTG | 1 cut(s) | 465 |
| MspI | CCGG | 2 cut(s) | 130, 395 |
| MspR9I | CCNGG | 1 cut(s) | 279 |
| MvaI | CCWGG | 1 cut(s) | 279 |
| NdeII | GATC | 3 cut(s) | 214, 431, 700 |
| NlaIII | CATG | 2 cut(s) | 338, 501 |
| NlaIV | GGNNCC | 2 cut(s) | 101, 651 |
| NmuCI | GTSAC | 1 cut(s) | 527 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 503 |
| PinAI | ACCGGT | 1 cut(s) | 129 |
| PkrI | GCNGC | 1 cut(s) | 24 |
| PleI | GAGTC | 1 cut(s) | 720 |
| PpsI | GAGTC | 1 cut(s) | 720 |
| PshBI | ATTAAT | 1 cut(s) | 75 |
| PsiI | TTATAA | 1 cut(s) | 417 |
| Psp6I | CCWGG | 1 cut(s) | 277 |
| PspFI | CCCAGC | 1 cut(s) | 119 |
| PspGI | CCWGG | 1 cut(s) | 277 |
| PspN4I | GGNNCC | 2 cut(s) | 101, 651 |
| PspPI | GGNCC | 1 cut(s) | 285 |
| RseI | CAYNNNNRTG | 1 cut(s) | 465 |
| Rsr2I | CGGWCCG | 1 cut(s) | 285 |
| RsrII | CGGWCCG | 1 cut(s) | 285 |
| SaqAI | TTAA | 6 cut(s) | 75, 152, 260, 444, 489, 510 |
| SatI | GCNGC | 1 cut(s) | 23 |
| Sau3AI | GATC | 3 cut(s) | 214, 431, 700 |
| Sau96I | GGNCC | 1 cut(s) | 285 |
| SchI | GAGTC | 1 cut(s) | 721 |
| ScrFI | CCNGG | 1 cut(s) | 279 |
| SexAI | ACCWGGT | 1 cut(s) | 277 |
| SinI | GGWCC | 1 cut(s) | 285 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 465 |
| SmlI | CTYRAG | 1 cut(s) | 61 |
| SmoI | CTYRAG | 1 cut(s) | 61 |
| SpeI | ACTAGT | 1 cut(s) | 571 |
| Sse9I | AATT | 5 cut(s) | 261, 304, 580, 614, 737 |
| SsiI | CCGC | 1 cut(s) | 288 |
| SspMI | CTAG | 3 cut(s) | 242, 572, 620 |
| StyD4I | CCNGG | 1 cut(s) | 277 |
| StyI | CCWWGG | 2 cut(s) | 502, 684 |
| TaaI | ACNGT | 4 cut(s) | 69, 342, 442, 733 |
| TaiI | ACGT | 3 cut(s) | 300, 489, 699 |
| TaqI | TCGA | 4 cut(s) | 213, 424, 430, 720 |
| TasI | AATT | 5 cut(s) | 261, 304, 580, 614, 737 |
| Tru1I | TTAA | 6 cut(s) | 75, 152, 260, 444, 489, 510 |
| Tru9I | TTAA | 6 cut(s) | 75, 152, 260, 444, 489, 510 |
| TscAI | CASTG | 1 cut(s) | 74 |
| TseFI | GTSAC | 1 cut(s) | 527 |
| TseI | GCWGC | 1 cut(s) | 22 |
| Tsp45I | GTSAC | 1 cut(s) | 527 |
| TspDTI | ATGAA | 4 cut(s) | 221, 222, 351, 374 |
| TspRI | CASTG | 1 cut(s) | 74 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 503 |
| VpaK11BI | GGWCC | 1 cut(s) | 285 |
| VspI | ATTAAT | 1 cut(s) | 75 |
| XapI | RAATTY | 2 cut(s) | 614, 737 |
| XspI | CTAG | 3 cut(s) | 242, 572, 620 |
| ZraI | GACGTC | 1 cut(s) | 298 |