Rh4DG221900
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
42359775 .. 42361147
1373 bp
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UTR
Exon/CDS
Intron
Rh4DG221900.1

Sequence Viewer

Length: 510 bp
ATGATCCATAAGAGTGTCTGTATTGCTAAAATGATGGGATGCTGCAGTTGCTTTGGTTTCTCTATTGCTAGAAAGCCCAAACCGAAAAGGAAGCCTAGTTATAGCTATAGTAATCACCCTTCAAAGGAGCATTTGTTGGATGATGATTTAGAAGATGATGATGATTGTTCATATAATGATGATGCTACAAGTATAGGCAATGCTGAAGAAAGTGAGCAGCAAAGTCGTGCCAAACGTCCTGATGAGATACTAAGTTTCAGAGAACAGAATGGAATGATTTGCAGGCAGTACCCTGTGAAGGAAACCCACAAAGTTGTTCGCACAGAGGATGATGATGGGAATAAGATGGTCAATGAGTATGTTCGGGAGTGTAAGATTGGTTCTGGCAGTTATGGGAAAGTGGTTTTGTATCGAAGCCTTGTAGATGGAAAGCATTATGCACTAAAGGCGTTTCATAAATCTCATTTATTAAAACTCCGGGTTGCACCTTCGGAGACAGCTAAATTTTGA

Protein Analysis

169

Amino Acids

19.26

Weight (kDa)

8.11

Isoelectric Point (pI)

51.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 503
AcuI CTGAAG 1 cut(s) 225
AfaI GTAC 1 cut(s) 290
AfiI CCNNNNNNNGG 2 cut(s) 124, 298
AgsI TTSAA 1 cut(s) 123
AluBI AGCT 2 cut(s) 105, 500
AluI AGCT 2 cut(s) 105, 500
Alw26I GTCTC 1 cut(s) 488
ApeKI GCWGC 2 cut(s) 42, 217
ApoI RAATTY 1 cut(s) 503
AsuC2I CCSGG 1 cut(s) 479
AsuHPI GGTGA 1 cut(s) 107
BarI GAAGNNNNNNTAC 2 cut(s) 103, 135
BbvI GCAGC 2 cut(s) 29, 229
BccI CCATC 4 cut(s) 28, 329, 340, 419
BcgI CGANNNNNNTGC 2 cut(s) 206, 240
BcnI CCSGG 1 cut(s) 479
BcoDI GTCTC 1 cut(s) 488
BfaI CTAG 2 cut(s) 69, 96
BfmI CTRYAG 2 cut(s) 43, 106
BisI GCNGC 2 cut(s) 43, 218
BlsI GCNGC 2 cut(s) 44, 219
Bme1390I CCNGG 1 cut(s) 479
BmrFI CCNGG 1 cut(s) 479
BmsI GCATC 2 cut(s) 29, 172
BpuMI CCSGG 1 cut(s) 479
BsaXI ACNNNNNCTCC 2 cut(s) 119, 149
Bsc4I CCNNNNNNNGG 2 cut(s) 124, 298
Bse3DI GCAATG 1 cut(s) 205
BseGI GGATG 3 cut(s) 44, 145, 334
BseLI CCNNNNNNNGG 2 cut(s) 124, 298
BseMI GCAATG 1 cut(s) 205
BseXI GCAGC 2 cut(s) 29, 229
BsiSI CCGG 1 cut(s) 478
BslI CCNNNNNNNGG 2 cut(s) 124, 298
BsmAI GTCTC 1 cut(s) 488
Bsp143I GATC 1 cut(s) 3
BspMAI CTGCAG 1 cut(s) 47
BsrDI GCAATG 1 cut(s) 205
BssMI GATC 1 cut(s) 3
BstC8I GCNNGC 1 cut(s) 284
BstDEI CTNAG 1 cut(s) 251
BstF5I GGATG 3 cut(s) 44, 145, 334
BstKTI GATC 1 cut(s) 6
BstMAI GTCTC 1 cut(s) 488
BstMBI GATC 1 cut(s) 3
BstMWI GCNNNNNNNGC 2 cut(s) 48, 446
BstSCI CCNGG 1 cut(s) 477
BstSFI CTRYAG 2 cut(s) 43, 106
BstV1I GCAGC 2 cut(s) 29, 229
BtsCI GGATG 3 cut(s) 44, 145, 334
Cac8I GCNNGC 1 cut(s) 284
Csp6I GTAC 1 cut(s) 289
CviJI RGCY 5 cut(s) 76, 94, 105, 417, 500
CviKI_1 RGCY 5 cut(s) 76, 94, 105, 417, 500
CviQI GTAC 1 cut(s) 289
DdeI CTNAG 1 cut(s) 251
DpnI GATC 1 cut(s) 5
DpnII GATC 1 cut(s) 3
Eco57I CTGAAG 1 cut(s) 225
Fnu4HI GCNGC 2 cut(s) 43, 218
FokI GGATG 3 cut(s) 51, 152, 341
Fsp4HI GCNGC 2 cut(s) 43, 218
FspBI CTAG 2 cut(s) 69, 96
GluI GCNGC 2 cut(s) 43, 218
HapII CCGG 1 cut(s) 478
HpaII CCGG 1 cut(s) 478
HphI GGTGA 1 cut(s) 107
Hpy188I TCNGA 2 cut(s) 260, 493
Hpy188III TCNNGA 2 cut(s) 239, 365
HpyAV CCTTC 3 cut(s) 129, 292, 498
HpyCH4IV ACGT 1 cut(s) 235
HpyCH4V TGCA 4 cut(s) 45, 282, 440, 485
HpyF10VI GCNNNNNNNGC 2 cut(s) 48, 446
HpyF3I CTNAG 1 cut(s) 251
HpySE526I ACGT 1 cut(s) 235
Kzo9I GATC 1 cut(s) 3
LmnI GCTCC 1 cut(s) 127
LpnPI CCDG 5 cut(s) 252, 268, 306, 369, 491
Lsp1109I GCAGC 2 cut(s) 29, 229
LweI GCATC 2 cut(s) 29, 172
MaeI CTAG 2 cut(s) 69, 96
MaeII ACGT 1 cut(s) 235
MalI GATC 1 cut(s) 5
MboI GATC 1 cut(s) 3
MboII GAAGA 2 cut(s) 164, 218
MluCI AATT 1 cut(s) 503
MmeI TCCRAC 1 cut(s) 117
MnlI CCTC 1 cut(s) 319
MseI TTAA 1 cut(s) 470
MslI CAYNNNNRTG 1 cut(s) 12
MspI CCGG 1 cut(s) 478
MspR9I CCNGG 1 cut(s) 479
MwoI GCNNNNNNNGC 2 cut(s) 48, 446
NciI CCSGG 1 cut(s) 479
NdeII GATC 1 cut(s) 3
PcsI WCGNNNNNNNCGW 1 cut(s) 232
PkrI GCNGC 2 cut(s) 44, 219
PsrI GAACNNNNNNTAC 2 cut(s) 364, 396
PstI CTGCAG 1 cut(s) 47
RsaI GTAC 1 cut(s) 290
RsaNI GTAC 1 cut(s) 289
RseI CAYNNNNRTG 1 cut(s) 12
SaqAI TTAA 1 cut(s) 470
SatI GCNGC 2 cut(s) 43, 218
Sau3AI GATC 1 cut(s) 3
ScrFI CCNGG 1 cut(s) 479
SetI ASST 4 cut(s) 107, 238, 490, 502
SfaNI GCATC 2 cut(s) 29, 172
SfcI CTRYAG 2 cut(s) 43, 106
SmiMI CAYNNNNRTG 1 cut(s) 12
Sse9I AATT 1 cut(s) 503
SspMI CTAG 2 cut(s) 69, 96
StyD4I CCNGG 1 cut(s) 477
TaiI ACGT 1 cut(s) 238
TaqI TCGA 1 cut(s) 412
TasI AATT 1 cut(s) 503
Tru1I TTAA 1 cut(s) 470
Tru9I TTAA 1 cut(s) 470
TseI GCWGC 2 cut(s) 42, 217
TspDTI ATGAA 2 cut(s) 159, 443
XapI RAATTY 1 cut(s) 503
XspI CTAG 2 cut(s) 69, 96
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.