Rh7DG171600
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
15370328 .. 15376393
6066 bp
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UTR
Exon/CDS
Intron
Rh7DG171600.1

Sequence Viewer

Length: 372 bp
ATGATGATGATTGTTCATATAATGATGATGCTACATGCAAGTATGGGCAATGCTGAAGAAAGTGAGCAGCAAAGTCGTGCCAAACGTCCTGATGAGATACTAAGTTTCAGAGAACAGAATGGAATGATTTGCAGGCAGTACCCTGTGAAGGAAACCCACAAAGTTGTTCGCACAGAGGATGATGATGGGAATAAGATGGTCAATGAGTATGTTCGGGAGTGTAAGATTGGTTCTGGCAGTTATGGGAAAGTGGTTTTGTATCGAAGCCTTGTAGATGGAAAGCATTATGCACTAAAGGCGTTTCATAAATCTCATTTATTAAAACTCCGGGTTGCACCTTCGGAGACAGCTAAATTTTGTCTGGAGCCTTAG

Protein Analysis

123

Amino Acids

14.16

Weight (kDa)

8.78

Isoelectric Point (pI)

59.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 353
AcuI CTGAAG 1 cut(s) 75
AfaI GTAC 1 cut(s) 140
AfiI CCNNNNNNNGG 1 cut(s) 148
AluBI AGCT 1 cut(s) 350
AluI AGCT 1 cut(s) 350
Alw26I GTCTC 1 cut(s) 338
ApeKI GCWGC 1 cut(s) 67
ApoI RAATTY 1 cut(s) 353
AsuC2I CCSGG 1 cut(s) 329
BbvI GCAGC 1 cut(s) 79
BccI CCATC 3 cut(s) 179, 190, 269
BcgI CGANNNNNNTGC 2 cut(s) 56, 90
BcnI CCSGG 1 cut(s) 329
BcoDI GTCTC 1 cut(s) 338
BisI GCNGC 1 cut(s) 68
BlsI GCNGC 1 cut(s) 69
Bme1390I CCNGG 1 cut(s) 329
BmiI GGNNCC 1 cut(s) 366
BmrFI CCNGG 1 cut(s) 329
BmsI GCATC 1 cut(s) 18
BpuMI CCSGG 1 cut(s) 329
Bsc4I CCNNNNNNNGG 1 cut(s) 148
Bse3DI GCAATG 1 cut(s) 55
BseGI GGATG 1 cut(s) 184
BseLI CCNNNNNNNGG 1 cut(s) 148
BseMI GCAATG 1 cut(s) 55
BseXI GCAGC 1 cut(s) 79
BsiSI CCGG 1 cut(s) 328
BslI CCNNNNNNNGG 1 cut(s) 148
BsmAI GTCTC 1 cut(s) 338
BspLI GGNNCC 1 cut(s) 366
BsrDI GCAATG 1 cut(s) 55
BstC8I GCNNGC 1 cut(s) 134
BstDEI CTNAG 2 cut(s) 101, 369
BstF5I GGATG 1 cut(s) 184
BstMAI GTCTC 1 cut(s) 338
BstMWI GCNNNNNNNGC 1 cut(s) 296
BstNSI RCATGY 1 cut(s) 38
BstSCI CCNGG 1 cut(s) 327
BstV1I GCAGC 1 cut(s) 79
BtsCI GGATG 1 cut(s) 184
Cac8I GCNNGC 1 cut(s) 134
Csp6I GTAC 1 cut(s) 139
CviAII CATG 1 cut(s) 35
CviJI RGCY 3 cut(s) 267, 350, 367
CviKI_1 RGCY 3 cut(s) 267, 350, 367
CviQI GTAC 1 cut(s) 139
DdeI CTNAG 2 cut(s) 101, 369
Eco57I CTGAAG 1 cut(s) 75
FaeI CATG 1 cut(s) 38
FaiI YATR 8 cut(s) 18, 20, 36, 44, 210, 243, 288, 306
FatI CATG 1 cut(s) 34
Fnu4HI GCNGC 1 cut(s) 68
FokI GGATG 1 cut(s) 191
Fsp4HI GCNGC 1 cut(s) 68
GluI GCNGC 1 cut(s) 68
HapII CCGG 1 cut(s) 328
Hin1II CATG 1 cut(s) 38
HpaII CCGG 1 cut(s) 328
Hpy188I TCNGA 2 cut(s) 110, 343
Hpy188III TCNNGA 3 cut(s) 89, 215, 362
HpyAV CCTTC 2 cut(s) 142, 348
HpyCH4IV ACGT 1 cut(s) 85
HpyCH4V TGCA 4 cut(s) 38, 132, 290, 335
HpyF10VI GCNNNNNNNGC 1 cut(s) 296
HpyF3I CTNAG 2 cut(s) 101, 369
HpySE526I ACGT 1 cut(s) 85
Hsp92II CATG 1 cut(s) 38
LmnI GCTCC 1 cut(s) 364
LpnPI CCDG 6 cut(s) 102, 118, 156, 219, 341, 347
Lsp1109I GCAGC 1 cut(s) 79
LweI GCATC 1 cut(s) 18
MaeII ACGT 1 cut(s) 85
MboII GAAGA 1 cut(s) 68
MluCI AATT 1 cut(s) 353
MnlI CCTC 1 cut(s) 169
MseI TTAA 1 cut(s) 320
MspI CCGG 1 cut(s) 328
MspR9I CCNGG 1 cut(s) 329
MwoI GCNNNNNNNGC 1 cut(s) 296
NciI CCSGG 1 cut(s) 329
NlaIII CATG 1 cut(s) 38
NlaIV GGNNCC 1 cut(s) 366
NspI RCATGY 1 cut(s) 38
PcsI WCGNNNNNNNCGW 1 cut(s) 82
PkrI GCNGC 1 cut(s) 69
PspN4I GGNNCC 1 cut(s) 366
PsrI GAACNNNNNNTAC 2 cut(s) 214, 246
RsaI GTAC 1 cut(s) 140
RsaNI GTAC 1 cut(s) 139
SaqAI TTAA 1 cut(s) 320
SatI GCNGC 1 cut(s) 68
ScrFI CCNGG 1 cut(s) 329
SetI ASST 3 cut(s) 88, 340, 352
SfaNI GCATC 1 cut(s) 18
Sse9I AATT 1 cut(s) 353
StyD4I CCNGG 1 cut(s) 327
TaiI ACGT 1 cut(s) 88
TaqI TCGA 1 cut(s) 262
TasI AATT 1 cut(s) 353
Tru1I TTAA 1 cut(s) 320
Tru9I TTAA 1 cut(s) 320
TseI GCWGC 1 cut(s) 67
TspDTI ATGAA 2 cut(s) 5, 293
XapI RAATTY 1 cut(s) 353
XceI RCATGY 1 cut(s) 38
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.