Rh7CG440400
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
57744642 .. 57745824
1183 bp
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UTR
Exon/CDS
Intron
Rh7CG440400.1

Sequence Viewer

Length: 318 bp
ATGGGCAATGCTGAAGAAAGTGAGCAGCAAAGTCGTGCCAAACGTCCTGATGAGATACTAAGTTTCAGAGAACAGAATGGAATGATTTGCAGGCAGTACCCTGTGAAGGAAACCCACAAAGTTGTTCGCACAGAGGATGATGATGGGAATAAGATGGTCAATGAGTATGTTCGGGAGTGTAAGATTGGTTCTGGCAGTTATGGGAAAGTGGTTTTGTATCGAAGCCTTGTAGATGGAAAGCATTATGCACTAAAGGCGTTTCATAAATCTCATTTATTAAAACTCCGGGTTGCACCTTCGGAGACAGCTAAATTTTGA

Protein Analysis

105

Amino Acids

12.06

Weight (kDa)

9.12

Isoelectric Point (pI)

62.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 311
AcuI CTGAAG 1 cut(s) 33
AfaI GTAC 1 cut(s) 98
AfiI CCNNNNNNNGG 1 cut(s) 106
AluBI AGCT 1 cut(s) 308
AluI AGCT 1 cut(s) 308
Alw26I GTCTC 1 cut(s) 296
ApeKI GCWGC 1 cut(s) 25
ApoI RAATTY 1 cut(s) 311
AsuC2I CCSGG 1 cut(s) 287
BbvI GCAGC 1 cut(s) 37
BccI CCATC 3 cut(s) 137, 148, 227
BcgI CGANNNNNNTGC 2 cut(s) 14, 48
BcnI CCSGG 1 cut(s) 287
BcoDI GTCTC 1 cut(s) 296
BisI GCNGC 1 cut(s) 26
BlsI GCNGC 1 cut(s) 27
Bme1390I CCNGG 1 cut(s) 287
BmrFI CCNGG 1 cut(s) 287
BpuMI CCSGG 1 cut(s) 287
Bsc4I CCNNNNNNNGG 1 cut(s) 106
Bse3DI GCAATG 1 cut(s) 13
BseGI GGATG 1 cut(s) 142
BseLI CCNNNNNNNGG 1 cut(s) 106
BseMI GCAATG 1 cut(s) 13
BseXI GCAGC 1 cut(s) 37
BsiSI CCGG 1 cut(s) 286
BslI CCNNNNNNNGG 1 cut(s) 106
BsmAI GTCTC 1 cut(s) 296
BsrDI GCAATG 1 cut(s) 13
BstC8I GCNNGC 1 cut(s) 92
BstDEI CTNAG 1 cut(s) 59
BstF5I GGATG 1 cut(s) 142
BstMAI GTCTC 1 cut(s) 296
BstMWI GCNNNNNNNGC 1 cut(s) 254
BstSCI CCNGG 1 cut(s) 285
BstV1I GCAGC 1 cut(s) 37
BtsCI GGATG 1 cut(s) 142
Cac8I GCNNGC 1 cut(s) 92
Csp6I GTAC 1 cut(s) 97
CviJI RGCY 2 cut(s) 225, 308
CviKI_1 RGCY 2 cut(s) 225, 308
CviQI GTAC 1 cut(s) 97
DdeI CTNAG 1 cut(s) 59
Eco57I CTGAAG 1 cut(s) 33
FaiI YATR 4 cut(s) 168, 201, 246, 264
Fnu4HI GCNGC 1 cut(s) 26
FokI GGATG 1 cut(s) 149
Fsp4HI GCNGC 1 cut(s) 26
GluI GCNGC 1 cut(s) 26
HapII CCGG 1 cut(s) 286
HpaII CCGG 1 cut(s) 286
Hpy188I TCNGA 2 cut(s) 68, 301
Hpy188III TCNNGA 2 cut(s) 47, 173
HpyAV CCTTC 2 cut(s) 100, 306
HpyCH4IV ACGT 1 cut(s) 43
HpyCH4V TGCA 3 cut(s) 90, 248, 293
HpyF10VI GCNNNNNNNGC 1 cut(s) 254
HpyF3I CTNAG 1 cut(s) 59
HpySE526I ACGT 1 cut(s) 43
LpnPI CCDG 5 cut(s) 60, 76, 114, 177, 299
Lsp1109I GCAGC 1 cut(s) 37
MaeII ACGT 1 cut(s) 43
MboII GAAGA 1 cut(s) 26
MluCI AATT 1 cut(s) 311
MnlI CCTC 1 cut(s) 127
MseI TTAA 1 cut(s) 278
MspI CCGG 1 cut(s) 286
MspR9I CCNGG 1 cut(s) 287
MwoI GCNNNNNNNGC 1 cut(s) 254
NciI CCSGG 1 cut(s) 287
PcsI WCGNNNNNNNCGW 1 cut(s) 40
PkrI GCNGC 1 cut(s) 27
PsrI GAACNNNNNNTAC 2 cut(s) 172, 204
RsaI GTAC 1 cut(s) 98
RsaNI GTAC 1 cut(s) 97
SaqAI TTAA 1 cut(s) 278
SatI GCNGC 1 cut(s) 26
ScrFI CCNGG 1 cut(s) 287
SetI ASST 3 cut(s) 46, 298, 310
SgeI CNNG 9 cut(s) 47, 59, 103, 113, 185, 204, 239, 298, 299
Sse9I AATT 1 cut(s) 311
StyD4I CCNGG 1 cut(s) 285
TaiI ACGT 1 cut(s) 46
TaqI TCGA 1 cut(s) 220
TasI AATT 1 cut(s) 311
Tru1I TTAA 1 cut(s) 278
Tru9I TTAA 1 cut(s) 278
TseI GCWGC 1 cut(s) 25
TspDTI ATGAA 1 cut(s) 251
XapI RAATTY 1 cut(s) 311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.