Rw2G018650
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
24346359 .. 24350511
4153 bp
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UTR
Exon/CDS
Intron
Rw2G018650.1

Sequence Viewer

Length: 489 bp
ATGGGCAATGCTGAAGAAAGTGAGCAGCAAAGTCGTGCCAAACGTCCTGATGAGATACTAAGTTTCAGAGAACAGAATGGAATGATTTGCAGGCAGTACCCTGTGAAGGAAACCCACAAAGTTGTTCGCACAGAGGATGATGATGGGAATAAGATGGTCAATGAGTATGTTCGGGAGTGTAAGATTGGTTCTGGCAGTTATGGGAAAGTGGTTTTGTATCGAAGCCTTGTAGATGGAAAGCATTATGCACTAAAGGTACTCTGGAATATTTCCCTGCTTCTCCTTCCTCTGCGAGTACATAGCCGCTCGAATCCAGAGAACAATGCTCACGTGGAGCCACATAAGTTACTAATACTATTAACTTTCCCACTATACTGCAACGGGAAAAATACTCCAGTAGCACTTGGTTTCATTCTGTCACTAGAAAGCTGCGACCATTTGACAAAGCAAGGAACTCACCTCCTATCTCGAACAAACATGGCACACAAG

Protein Analysis

163

Amino Acids

18.57

Weight (kDa)

8.88

Isoelectric Point (pI)

62.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 306
AciI CCGC 1 cut(s) 304
AcuI CTGAAG 1 cut(s) 33
AcvI CACGTG 1 cut(s) 331
AfaI GTAC 3 cut(s) 98, 258, 297
AfiI CCNNNNNNNGG 1 cut(s) 106
AluBI AGCT 1 cut(s) 429
AluI AGCT 1 cut(s) 429
ApeKI GCWGC 2 cut(s) 25, 429
AsuHPI GGTGA 1 cut(s) 449
BbrPI CACGTG 1 cut(s) 331
BbvI GCAGC 2 cut(s) 37, 416
BccI CCATC 3 cut(s) 137, 148, 227
BcgI CGANNNNNNTGC 2 cut(s) 14, 48
BfaI CTAG 1 cut(s) 422
BisI GCNGC 3 cut(s) 26, 304, 430
BlsI GCNGC 3 cut(s) 27, 305, 431
BmiI GGNNCC 1 cut(s) 336
BpmI CTGGAG 1 cut(s) 378
BsaAI YACGTR 1 cut(s) 331
Bsc4I CCNNNNNNNGG 1 cut(s) 106
Bse1I ACTGG 1 cut(s) 395
Bse3DI GCAATG 1 cut(s) 13
BseGI GGATG 1 cut(s) 142
BseLI CCNNNNNNNGG 1 cut(s) 106
BseMI GCAATG 1 cut(s) 13
BseNI ACTGG 1 cut(s) 395
BseXI GCAGC 2 cut(s) 37, 416
BslI CCNNNNNNNGG 1 cut(s) 106
BspACI CCGC 1 cut(s) 304
BspLI GGNNCC 1 cut(s) 336
BsrBI CCGCTC 1 cut(s) 306
BsrDI GCAATG 1 cut(s) 13
BsrI ACTGG 1 cut(s) 395
BstBAI YACGTR 1 cut(s) 331
BstC8I GCNNGC 1 cut(s) 92
BstDEI CTNAG 1 cut(s) 59
BstF5I GGATG 1 cut(s) 142
BstV1I GCAGC 2 cut(s) 37, 416
BtsCI GGATG 1 cut(s) 142
Cac8I GCNNGC 1 cut(s) 92
Csp6I GTAC 3 cut(s) 97, 257, 296
CviAII CATG 1 cut(s) 478
CviJI RGCY 4 cut(s) 225, 303, 337, 429
CviKI_1 RGCY 4 cut(s) 225, 303, 337, 429
CviQI GTAC 3 cut(s) 97, 257, 296
DdeI CTNAG 1 cut(s) 59
Eco57I CTGAAG 1 cut(s) 33
Eco72I CACGTG 1 cut(s) 331
FaeI CATG 1 cut(s) 481
FaiI YATR 7 cut(s) 168, 201, 246, 300, 342, 373, 479
FatI CATG 1 cut(s) 477
Fnu4HI GCNGC 3 cut(s) 26, 304, 430
FokI GGATG 1 cut(s) 149
Fsp4HI GCNGC 3 cut(s) 26, 304, 430
FspBI CTAG 1 cut(s) 422
GluI GCNGC 3 cut(s) 26, 304, 430
GsuI CTGGAG 1 cut(s) 378
Hin1II CATG 1 cut(s) 481
HinfI GANTC 1 cut(s) 310
HphI GGTGA 1 cut(s) 449
Hpy188I TCNGA 1 cut(s) 68
Hpy188III TCNNGA 5 cut(s) 47, 173, 262, 314, 468
HpyAV CCTTC 2 cut(s) 100, 293
HpyCH4IV ACGT 2 cut(s) 43, 330
HpyCH4V TGCA 3 cut(s) 90, 248, 378
HpyF3I CTNAG 1 cut(s) 59
HpySE526I ACGT 2 cut(s) 43, 330
Hsp92II CATG 1 cut(s) 481
LmnI GCTCC 1 cut(s) 334
LpnPI CCDG 8 cut(s) 60, 76, 114, 177, 247, 287, 327, 408
Lsp1109I GCAGC 2 cut(s) 37, 416
MaeI CTAG 1 cut(s) 422
MaeII ACGT 2 cut(s) 43, 330
MaeIII GTNAC 2 cut(s) 345, 417
MbiI CCGCTC 1 cut(s) 306
MboII GAAGA 1 cut(s) 26
MnlI CCTC 3 cut(s) 127, 297, 470
MseI TTAA 1 cut(s) 359
NlaIII CATG 1 cut(s) 481
NlaIV GGNNCC 1 cut(s) 336
NmuCI GTSAC 1 cut(s) 417
PcsI WCGNNNNNNNCGW 1 cut(s) 40
PfeI GAWTC 1 cut(s) 310
PkrI GCNGC 3 cut(s) 27, 305, 431
PmaCI CACGTG 1 cut(s) 331
PmlI CACGTG 1 cut(s) 331
Ppu21I YACGTR 1 cut(s) 331
PspCI CACGTG 1 cut(s) 331
PspN4I GGNNCC 1 cut(s) 336
PsrI GAACNNNNNNTAC 2 cut(s) 172, 204
RsaI GTAC 3 cut(s) 98, 258, 297
RsaNI GTAC 3 cut(s) 97, 257, 296
SaqAI TTAA 1 cut(s) 359
SatI GCNGC 3 cut(s) 26, 304, 430
SetI ASST 5 cut(s) 46, 258, 333, 431, 462
SsiI CCGC 1 cut(s) 304
SspI AATATT 1 cut(s) 268
SspMI CTAG 1 cut(s) 422
TaiI ACGT 2 cut(s) 46, 333
TaqI TCGA 3 cut(s) 220, 308, 469
TatI WGTACW 1 cut(s) 295
TauI GCSGC 1 cut(s) 306
TfiI GAWTC 1 cut(s) 310
Tru1I TTAA 1 cut(s) 359
Tru9I TTAA 1 cut(s) 359
TseFI GTSAC 1 cut(s) 417
TseI GCWGC 2 cut(s) 25, 429
Tsp45I GTSAC 1 cut(s) 417
TspDTI ATGAA 1 cut(s) 400
XspI CTAG 1 cut(s) 422
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.