No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0009491.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00032890 |
| rosa_samantha | Rh4DG161100 Rh4DG221900 Rh5BG553900 Rh5CG577000 Rh6AG178700 Rh7AG420500 Rh7CG440400 Rh7DG171600 |
| rosa_wichuraiana | Rw1G014020 Rw2G018650 Rw4G008060 Rw4G012700 Rw7G014640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 306 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 57, 141 |
| AgsI | TTSAA | 1 cut(s) | 118 |
| AluBI | AGCT | 2 cut(s) | 28, 326 |
| AluI | AGCT | 2 cut(s) | 28, 326 |
| Alw26I | GTCTC | 2 cut(s) | 156, 220 |
| AoxI | GGCC | 1 cut(s) | 264 |
| ApoI | RAATTY | 1 cut(s) | 306 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 72, 104 |
| AspA2I | CCTAGG | 1 cut(s) | 139 |
| AspS9I | GGNCC | 1 cut(s) | 265 |
| AvrII | CCTAGG | 1 cut(s) | 139 |
| BccI | CCATC | 2 cut(s) | 143, 204 |
| BcoDI | GTCTC | 2 cut(s) | 156, 220 |
| BfaI | CTAG | 1 cut(s) | 140 |
| BlnI | CCTAGG | 1 cut(s) | 139 |
| BmgT120I | GGNCC | 1 cut(s) | 265 |
| BmiI | GGNNCC | 2 cut(s) | 62, 147 |
| BmsI | GCATC | 1 cut(s) | 28 |
| BsaJI | CCNNGG | 1 cut(s) | 139 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 198, 228 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 57, 141 |
| BseDI | CCNNGG | 1 cut(s) | 139 |
| BseGI | GGATG | 1 cut(s) | 135 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 57, 141 |
| BseMII | CTCAG | 1 cut(s) | 175 |
| BseRI | GAGGAG | 1 cut(s) | 35 |
| BseYI | CCCAGC | 1 cut(s) | 24 |
| BshFI | GGCC | 1 cut(s) | 266 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 57, 141 |
| BsmAI | GTCTC | 2 cut(s) | 156, 220 |
| BsmBI | CGTCTC | 2 cut(s) | 156, 220 |
| BsnI | GGCC | 1 cut(s) | 266 |
| BspANI | GGCC | 1 cut(s) | 266 |
| BspCNI | CTCAG | 1 cut(s) | 174 |
| BspLI | GGNNCC | 2 cut(s) | 62, 147 |
| BssECI | CCNNGG | 1 cut(s) | 139 |
| BssT1I | CCWWGG | 1 cut(s) | 139 |
| BstDEI | CTNAG | 2 cut(s) | 110, 161 |
| BstF5I | GGATG | 1 cut(s) | 135 |
| BstMAI | GTCTC | 2 cut(s) | 156, 220 |
| BsuRI | GGCC | 1 cut(s) | 266 |
| BtsCI | GGATG | 1 cut(s) | 135 |
| BtsIMutI | CAGTG | 1 cut(s) | 169 |
| Cfr13I | GGNCC | 1 cut(s) | 265 |
| CseI | GACGC | 1 cut(s) | 202 |
| CviJI | RGCY | 4 cut(s) | 28, 61, 266, 326 |
| CviKI_1 | RGCY | 4 cut(s) | 28, 61, 266, 326 |
| DdeI | CTNAG | 2 cut(s) | 110, 161 |
| Eco130I | CCWWGG | 1 cut(s) | 139 |
| EcoT14I | CCWWGG | 1 cut(s) | 139 |
| ErhI | CCWWGG | 1 cut(s) | 139 |
| Esp3I | CGTCTC | 2 cut(s) | 156, 220 |
| FaiI | YATR | 1 cut(s) | 329 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 225, 257 |
| FokI | GGATG | 1 cut(s) | 122 |
| FspBI | CTAG | 1 cut(s) | 140 |
| GsaI | CCCAGC | 1 cut(s) | 28 |
| HaeIII | GGCC | 1 cut(s) | 266 |
| HgaI | GACGC | 1 cut(s) | 202 |
| HincII | GTYRAC | 1 cut(s) | 239 |
| HindII | GTYRAC | 1 cut(s) | 239 |
| HinfI | GANTC | 2 cut(s) | 114, 207 |
| Hpy166II | GTNNAC | 1 cut(s) | 239 |
| Hpy188I | TCNGA | 1 cut(s) | 222 |
| Hpy8I | GTNNAC | 1 cut(s) | 239 |
| HpyAV | CCTTC | 3 cut(s) | 74, 101, 167 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| HpyF3I | CTNAG | 2 cut(s) | 110, 161 |
| LmnI | GCTCC | 2 cut(s) | 66, 323 |
| LpnPI | CCDG | 4 cut(s) | 38, 108, 213, 276 |
| LweI | GCATC | 1 cut(s) | 28 |
| MaeI | CTAG | 1 cut(s) | 140 |
| MluCI | AATT | 3 cut(s) | 54, 118, 306 |
| MlyI | GAGTC | 1 cut(s) | 216 |
| MnlI | CCTC | 5 cut(s) | 19, 56, 278, 285, 289 |
| MseI | TTAA | 1 cut(s) | 14 |
| NlaIV | GGNNCC | 2 cut(s) | 62, 147 |
| PfeI | GAWTC | 1 cut(s) | 114 |
| PflFI | GACNNNGTC | 1 cut(s) | 234 |
| PleI | GAGTC | 1 cut(s) | 215 |
| PpsI | GAGTC | 1 cut(s) | 215 |
| PspFI | CCCAGC | 1 cut(s) | 24 |
| PspN4I | GGNNCC | 2 cut(s) | 62, 147 |
| PspPI | GGNCC | 1 cut(s) | 265 |
| PsyI | GACNNNGTC | 1 cut(s) | 234 |
| SaqAI | TTAA | 1 cut(s) | 14 |
| Sau96I | GGNCC | 1 cut(s) | 265 |
| SchI | GAGTC | 1 cut(s) | 216 |
| SetI | ASST | 4 cut(s) | 30, 238, 295, 328 |
| SfaNI | GCATC | 1 cut(s) | 28 |
| SgeI | CNNG | 9 cut(s) | 37, 80, 98, 135, 152, 215, 240, 245, 303 |
| Sse9I | AATT | 3 cut(s) | 54, 118, 306 |
| SspMI | CTAG | 1 cut(s) | 140 |
| StyI | CCWWGG | 1 cut(s) | 139 |
| TasI | AATT | 3 cut(s) | 54, 118, 306 |
| TfiI | GAWTC | 1 cut(s) | 114 |
| Tru1I | TTAA | 1 cut(s) | 14 |
| Tru9I | TTAA | 1 cut(s) | 14 |
| TscAI | CASTG | 1 cut(s) | 169 |
| TspGWI | ACGGA | 1 cut(s) | 138 |
| TspRI | CASTG | 1 cut(s) | 169 |
| Tth111I | GACNNNGTC | 1 cut(s) | 234 |
| XapI | RAATTY | 1 cut(s) | 306 |
| XmaJI | CCTAGG | 1 cut(s) | 139 |
| XspI | CTAG | 1 cut(s) | 140 |