Rw4G012700
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Forward (+)
29888774 .. 29889605
832 bp
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UTR
Exon/CDS
Intron
Rw4G012700.1

Sequence Viewer

Length: 297 bp
ATGGGCAATGCTGAAGAAAGTGAGCAGCAAAGTCGTGCCAAACGTCCTGATGAGAGACTAAGTTTCAGAGAACAGAATGGAATGATTTGCAGGCAGTACCCTGTGAAGGAAACCCACAAAGTTGTTCGCACAGAGGATGATGATGGGAATAAGATGGTCAATGAGTATGTTCGGGAGTGTAAGATTGGTTCTGGCAGTTATGGGAAAGTGGTTTTGTATCGAAGCCTTGTAGATGGAAAGCATTATGCACTAAAGGTACTGTTTGTTTTTCTTAAATTTCTAGCTTGGATGTTTTGA

Protein Analysis

98

Amino Acids

11.48

Weight (kDa)

8.93

Isoelectric Point (pI)

54.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 275
AcuI CTGAAG 1 cut(s) 33
AfaI GTAC 2 cut(s) 98, 258
AfiI CCNNNNNNNGG 1 cut(s) 106
AluBI AGCT 1 cut(s) 284
AluI AGCT 1 cut(s) 284
Alw26I GTCTC 1 cut(s) 49
ApeKI GCWGC 1 cut(s) 25
ApoI RAATTY 1 cut(s) 275
BbvI GCAGC 1 cut(s) 37
BccI CCATC 3 cut(s) 137, 148, 227
BcgI CGANNNNNNTGC 2 cut(s) 14, 48
BcoDI GTCTC 1 cut(s) 49
BfaI CTAG 1 cut(s) 281
BisI GCNGC 1 cut(s) 26
BlsI GCNGC 1 cut(s) 27
Bsc4I CCNNNNNNNGG 1 cut(s) 106
Bse3DI GCAATG 1 cut(s) 13
BseGI GGATG 2 cut(s) 142, 294
BseLI CCNNNNNNNGG 1 cut(s) 106
BseMI GCAATG 1 cut(s) 13
BseXI GCAGC 1 cut(s) 37
BslI CCNNNNNNNGG 1 cut(s) 106
BsmAI GTCTC 1 cut(s) 49
BsrDI GCAATG 1 cut(s) 13
Bst4CI ACNGT 1 cut(s) 261
BstC8I GCNNGC 1 cut(s) 92
BstDEI CTNAG 1 cut(s) 59
BstF5I GGATG 2 cut(s) 142, 294
BstMAI GTCTC 1 cut(s) 49
BstV1I GCAGC 1 cut(s) 37
BtsCI GGATG 2 cut(s) 142, 294
Cac8I GCNNGC 1 cut(s) 92
Csp6I GTAC 2 cut(s) 97, 257
CviJI RGCY 2 cut(s) 225, 284
CviKI_1 RGCY 2 cut(s) 225, 284
CviQI GTAC 2 cut(s) 97, 257
DdeI CTNAG 1 cut(s) 59
Eco57I CTGAAG 1 cut(s) 33
FaiI YATR 3 cut(s) 168, 201, 246
Fnu4HI GCNGC 1 cut(s) 26
FokI GGATG 1 cut(s) 149
Fsp4HI GCNGC 1 cut(s) 26
FspBI CTAG 1 cut(s) 281
GluI GCNGC 1 cut(s) 26
Hpy188I TCNGA 1 cut(s) 68
Hpy188III TCNNGA 2 cut(s) 47, 173
HpyAV CCTTC 1 cut(s) 100
HpyCH4III ACNGT 1 cut(s) 261
HpyCH4IV ACGT 1 cut(s) 43
HpyCH4V TGCA 2 cut(s) 90, 248
HpyF3I CTNAG 1 cut(s) 59
HpySE526I ACGT 1 cut(s) 43
LpnPI CCDG 4 cut(s) 60, 76, 114, 177
Lsp1109I GCAGC 1 cut(s) 37
MaeI CTAG 1 cut(s) 281
MaeII ACGT 1 cut(s) 43
MboII GAAGA 1 cut(s) 26
MluCI AATT 1 cut(s) 275
MnlI CCTC 1 cut(s) 127
MseI TTAA 1 cut(s) 273
PcsI WCGNNNNNNNCGW 1 cut(s) 40
PkrI GCNGC 1 cut(s) 27
PsrI GAACNNNNNNTAC 2 cut(s) 172, 204
RsaI GTAC 2 cut(s) 98, 258
RsaNI GTAC 2 cut(s) 97, 257
SaqAI TTAA 1 cut(s) 273
SatI GCNGC 1 cut(s) 26
SetI ASST 3 cut(s) 46, 258, 286
SgeI CNNG 8 cut(s) 47, 59, 103, 113, 185, 204, 239, 293
Sse9I AATT 1 cut(s) 275
SspMI CTAG 1 cut(s) 281
TaaI ACNGT 1 cut(s) 261
TaiI ACGT 1 cut(s) 46
TaqI TCGA 1 cut(s) 220
TasI AATT 1 cut(s) 275
Tru1I TTAA 1 cut(s) 273
Tru9I TTAA 1 cut(s) 273
TseI GCWGC 1 cut(s) 25
XapI RAATTY 1 cut(s) 275
XspI CTAG 1 cut(s) 281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.