Rh5AG287500

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
38957588 .. 38957975
388 bp
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UTR
Exon/CDS
Intron
Rh5AG287500.1

Sequence Viewer

Length: 186 bp
ATGGAGGAGTTAGAGCAAGCTACCAAGCATTTTGATGAAAGCAGTCTTCTGGGATATGGAAGCTTTGGACTTGTTTATAAAGGTTTGCTCCGTGATGGGATGGTTGTGGCTATCAAAAGACGCCCCGGTGCTCCTAGACAGGAATTTATCTCAGAGGTAATGTACTTGTCGCAGATTCATCACTGA

Protein Analysis

61

Amino Acids

6.97

Weight (kDa)

6.25

Isoelectric Point (pI)

58.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 78
AcsI RAATTY 1 cut(s) 143
AcyI GRCGYC 1 cut(s) 121
AfaI GTAC 1 cut(s) 164
AluBI AGCT 2 cut(s) 20, 63
AluI AGCT 2 cut(s) 20, 63
Alw21I GWGCWC 1 cut(s) 133
ApoI RAATTY 1 cut(s) 143
AsuC2I CCSGG 1 cut(s) 126
BbsI GAAGAC 1 cut(s) 38
Bbv12I GWGCWC 1 cut(s) 133
BccI CCATC 2 cut(s) 89, 94
BcnI CCSGG 1 cut(s) 126
BfaI CTAG 1 cut(s) 135
Bme1390I CCNGG 1 cut(s) 126
BmrFI CCNGG 1 cut(s) 126
BpiI GAAGAC 1 cut(s) 38
BpuMI CCSGG 1 cut(s) 126
BsaHI GRCGYC 1 cut(s) 121
BsaJI CCNNGG 1 cut(s) 124
BseDI CCNNGG 1 cut(s) 124
BseGI GGATG 1 cut(s) 105
BseMII CTCAG 1 cut(s) 165
BseRI GAGGAG 1 cut(s) 20
BsiHKAI GWGCWC 1 cut(s) 133
BsiSI CCGG 1 cut(s) 126
Bsp1286I GDGCHC 1 cut(s) 133
BspCNI CTCAG 1 cut(s) 164
BssECI CCNNGG 1 cut(s) 124
BssNI GRCGYC 1 cut(s) 121
BstACI GRCGYC 1 cut(s) 121
BstC8I GCNNGC 1 cut(s) 18
BstDEI CTNAG 1 cut(s) 151
BstF5I GGATG 1 cut(s) 105
BstSCI CCNGG 1 cut(s) 124
BstV2I GAAGAC 1 cut(s) 38
BtsCI GGATG 1 cut(s) 105
BtsIMutI CAGTG 1 cut(s) 181
Cac8I GCNNGC 1 cut(s) 18
CseI GACGC 1 cut(s) 129
Csp6I GTAC 1 cut(s) 163
CviJI RGCY 3 cut(s) 20, 63, 110
CviKI_1 RGCY 3 cut(s) 20, 63, 110
CviQI GTAC 1 cut(s) 163
DdeI CTNAG 1 cut(s) 151
FaiI YATR 2 cut(s) 57, 78
FokI GGATG 1 cut(s) 112
FspBI CTAG 1 cut(s) 135
HapII CCGG 1 cut(s) 126
HgaI GACGC 1 cut(s) 129
Hin1I GRCGYC 1 cut(s) 121
HindIII AAGCTT 1 cut(s) 61
HinfI GANTC 1 cut(s) 175
HpaII CCGG 1 cut(s) 126
Hpy188I TCNGA 1 cut(s) 154
HpyF3I CTNAG 1 cut(s) 151
Hsp92I GRCGYC 1 cut(s) 121
LmnI GCTCC 2 cut(s) 93, 136
LpnPI CCDG 3 cut(s) 35, 125, 139
MaeI CTAG 1 cut(s) 135
MboII GAAGA 1 cut(s) 38
MhlI GDGCHC 1 cut(s) 133
MluCI AATT 1 cut(s) 143
MnlI CCTC 1 cut(s) 148
MslI CAYNNNNRTG 1 cut(s) 33
MspI CCGG 1 cut(s) 126
MspR9I CCNGG 1 cut(s) 126
NciI CCSGG 1 cut(s) 126
PfeI GAWTC 1 cut(s) 175
PsiI TTATAA 1 cut(s) 78
RsaI GTAC 1 cut(s) 164
RsaNI GTAC 1 cut(s) 163
RseI CAYNNNNRTG 1 cut(s) 33
ScrFI CCNGG 1 cut(s) 126
SduI GDGCHC 1 cut(s) 133
SetI ASST 4 cut(s) 22, 65, 85, 159
SmiMI CAYNNNNRTG 1 cut(s) 33
Sse9I AATT 1 cut(s) 143
SspMI CTAG 1 cut(s) 135
StyD4I CCNGG 1 cut(s) 124
TasI AATT 1 cut(s) 143
TatI WGTACW 1 cut(s) 162
TfiI GAWTC 1 cut(s) 175
TspDTI ATGAA 2 cut(s) 51, 167
TspGWI ACGGA 1 cut(s) 80
XapI RAATTY 1 cut(s) 143
XspI CTAG 1 cut(s) 135
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.