Poly (ADP-ribose) polymerase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000011102 RLG00000030025 |
| rosa_multiflora | Rmu_sc0001839.1_g000014 Rmu_sc0004514.1_g000021 Rmu_sc0008320.1_g000002 Rmu_sc0014034.1_g000002 |
| rosa_samantha | Rh2DG358600 Rh5BG080300 Rh5DG526300 |
| rosa_wichuraiana | Rw0G009170 Rw7G028350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 60, 168 |
| AclWI | GGATC | 1 cut(s) | 58 |
| AcoI | YGGCCR | 1 cut(s) | 117 |
| AfaI | GTAC | 1 cut(s) | 14 |
| AjnI | CCWGG | 1 cut(s) | 119 |
| AluBI | AGCT | 1 cut(s) | 33 |
| AluI | AGCT | 1 cut(s) | 33 |
| Alw21I | GWGCWC | 1 cut(s) | 87 |
| Alw44I | GTGCAC | 1 cut(s) | 83 |
| AlwI | GGATC | 1 cut(s) | 58 |
| AoxI | GGCC | 1 cut(s) | 117 |
| ApaLI | GTGCAC | 1 cut(s) | 83 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 132 |
| AsuC2I | CCSGG | 1 cut(s) | 112 |
| AsuHPI | GGTGA | 1 cut(s) | 182 |
| AsuII | TTCGAA | 1 cut(s) | 126 |
| BaeGI | GKGCMC | 1 cut(s) | 87 |
| BalI | TGGCCA | 1 cut(s) | 119 |
| Bbv12I | GWGCWC | 1 cut(s) | 87 |
| BciT130I | CCWGG | 1 cut(s) | 121 |
| BcnI | CCSGG | 1 cut(s) | 112 |
| Bme1390I | CCNGG | 2 cut(s) | 112, 121 |
| BmrFI | CCNGG | 2 cut(s) | 112, 121 |
| Bpu14I | TTCGAA | 1 cut(s) | 126 |
| BpuMI | CCSGG | 1 cut(s) | 112 |
| Bsa29I | ATCGAT | 1 cut(s) | 95 |
| BseBI | CCWGG | 1 cut(s) | 121 |
| BseCI | ATCGAT | 1 cut(s) | 95 |
| BseRI | GAGGAG | 1 cut(s) | 23 |
| BseSI | GKGCMC | 1 cut(s) | 87 |
| BshFI | GGCC | 1 cut(s) | 119 |
| BshVI | ATCGAT | 1 cut(s) | 95 |
| BsiHKAI | GWGCWC | 1 cut(s) | 87 |
| BsiSI | CCGG | 1 cut(s) | 111 |
| BsnI | GGCC | 1 cut(s) | 119 |
| Bsp119I | TTCGAA | 1 cut(s) | 126 |
| Bsp1286I | GDGCHC | 1 cut(s) | 87 |
| Bsp143I | GATC | 1 cut(s) | 50 |
| BspACI | CCGC | 2 cut(s) | 60, 168 |
| BspANI | GGCC | 1 cut(s) | 119 |
| BspDI | ATCGAT | 1 cut(s) | 95 |
| BspPI | GGATC | 1 cut(s) | 58 |
| BspT104I | TTCGAA | 1 cut(s) | 126 |
| BssMI | GATC | 1 cut(s) | 50 |
| Bst2UI | CCWGG | 1 cut(s) | 121 |
| BstBI | TTCGAA | 1 cut(s) | 126 |
| BstC8I | GCNNGC | 2 cut(s) | 117, 150 |
| BstKTI | GATC | 1 cut(s) | 53 |
| BstMBI | GATC | 1 cut(s) | 50 |
| BstNI | CCWGG | 1 cut(s) | 121 |
| BstSCI | CCNGG | 2 cut(s) | 110, 119 |
| BstSLI | GKGCMC | 1 cut(s) | 87 |
| Bsu15I | ATCGAT | 1 cut(s) | 95 |
| BsuRI | GGCC | 1 cut(s) | 119 |
| BsuTUI | ATCGAT | 1 cut(s) | 95 |
| Cac8I | GCNNGC | 2 cut(s) | 117, 150 |
| ClaI | ATCGAT | 1 cut(s) | 95 |
| Csp6I | GTAC | 1 cut(s) | 13 |
| CviJI | RGCY | 4 cut(s) | 33, 115, 119, 152 |
| CviKI_1 | RGCY | 4 cut(s) | 33, 115, 119, 152 |
| CviQI | GTAC | 1 cut(s) | 13 |
| DpnI | GATC | 1 cut(s) | 52 |
| DpnII | GATC | 1 cut(s) | 50 |
| EaeI | YGGCCR | 1 cut(s) | 117 |
| EciI | GGCGGA | 1 cut(s) | 75 |
| EcoRII | CCWGG | 1 cut(s) | 119 |
| FaiI | YATR | 1 cut(s) | 47 |
| HaeIII | GGCC | 1 cut(s) | 119 |
| HapII | CCGG | 1 cut(s) | 111 |
| HinfI | GANTC | 1 cut(s) | 184 |
| HpaII | CCGG | 1 cut(s) | 111 |
| HphI | GGTGA | 1 cut(s) | 182 |
| Hpy166II | GTNNAC | 1 cut(s) | 85 |
| Hpy188I | TCNGA | 1 cut(s) | 189 |
| Hpy188III | TCNNGA | 2 cut(s) | 28, 102 |
| Hpy8I | GTNNAC | 1 cut(s) | 85 |
| Hpy99I | CGWCG | 1 cut(s) | 58 |
| HpyCH4V | TGCA | 1 cut(s) | 85 |
| Kzo9I | GATC | 1 cut(s) | 50 |
| LpnPI | CCDG | 6 cut(s) | 87, 101, 106, 124, 133, 134 |
| MaeIII | GTNAC | 1 cut(s) | 64 |
| MalI | GATC | 1 cut(s) | 52 |
| MboI | GATC | 1 cut(s) | 50 |
| MhlI | GDGCHC | 1 cut(s) | 87 |
| MlsI | TGGCCA | 1 cut(s) | 119 |
| MluNI | TGGCCA | 1 cut(s) | 119 |
| MlyI | GAGTC | 1 cut(s) | 178 |
| MnlI | CCTC | 4 cut(s) | 64, 73, 174, 183 |
| Mox20I | TGGCCA | 1 cut(s) | 119 |
| MroXI | GAANNNNTTC | 1 cut(s) | 132 |
| MscI | TGGCCA | 1 cut(s) | 119 |
| Msp20I | TGGCCA | 1 cut(s) | 119 |
| MspI | CCGG | 1 cut(s) | 111 |
| MspR9I | CCNGG | 2 cut(s) | 112, 121 |
| MvaI | CCWGG | 1 cut(s) | 121 |
| NciI | CCSGG | 1 cut(s) | 112 |
| NdeII | GATC | 1 cut(s) | 50 |
| NspV | TTCGAA | 1 cut(s) | 126 |
| PdmI | GAANNNNTTC | 1 cut(s) | 132 |
| PleI | GAGTC | 1 cut(s) | 178 |
| PpsI | GAGTC | 1 cut(s) | 178 |
| Psp6I | CCWGG | 1 cut(s) | 119 |
| PspGI | CCWGG | 1 cut(s) | 119 |
| RsaI | GTAC | 1 cut(s) | 14 |
| RsaNI | GTAC | 1 cut(s) | 13 |
| Sau3AI | GATC | 1 cut(s) | 50 |
| SchI | GAGTC | 1 cut(s) | 178 |
| ScrFI | CCNGG | 2 cut(s) | 112, 121 |
| SduI | GDGCHC | 1 cut(s) | 87 |
| SetI | ASST | 4 cut(s) | 35, 75, 84, 125 |
| SfuI | TTCGAA | 1 cut(s) | 126 |
| SsiI | CCGC | 2 cut(s) | 60, 168 |
| StyD4I | CCNGG | 2 cut(s) | 110, 119 |
| TaqI | TCGA | 3 cut(s) | 53, 95, 126 |
| TspGWI | ACGGA | 1 cut(s) | 83 |
| VneI | GTGCAC | 1 cut(s) | 83 |
| XmnI | GAANNNNTTC | 1 cut(s) | 132 |