Rh5BG491700

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0011193
Physical Location & Seq
Reverse (-)
78269858 .. 78275363
5506 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG491700.1

Sequence Viewer

Length: 2343 bp
ATGGGGAAGCAGAAGGGAGACGGAGCTAGGAGCAAGGCCCGCCCTTCAAGTAGCAGTTTGGCGGCGTCGCTGTTGCCGTCGGGTTCTACTGCGGCGGTGGGCTTCGGTGGCTACGTCGGAGGCTCTCGCCTGGATGCTCCTCCTTCCGGCGATGATTCAAGGCCCTTTTTGGAAGTAGATAGTGATTTGGCTCTACATTTGAAGAGGCTTGCAAGGAAAGATCCCACCACCAAGCTTAAAGCTTTGGCATCTCTATCCACACTGTTGAAGGAAAAGTCCACGAAGGACATAGTAGCGGCCATTCCACAATGGGGATTTGAATACAAAAGGCTTGTGGTGGACTATAATAGGGATGTGCGGCGAGCAACTCATGACACAATGACCATTCTTGTCACCACCGTTGGGAGAGATTTAGCGCCACAGCTGAAATCTTTGATGGGACCGTGGTGGTTTTCTCAATTTGACCCAGTCTCTGAAGTTTCTCAAGCTGCAAAGCGATCATTTCAGGCAGTCTTTTCAGCTCCAGAAAAGAGACTAGATGCTTTAATTTTATGCACGGCAGAGGTTTTTATTTATTTGGAAGAAAATCTGAGGCTTACACCGCAAAATATGTCCGATAAAGGAACTGCTCTGGATGAATTGCAAGAGATGCATCAGCAGGTGATATCTTCATCATTGCTGGCATTGGCCACACTTCTTGATGTCTTGGTTTGCTTACAACTAGAAAGACCAGGCACCGAAAGCATAGCTGCTCAACCAAAACATGCTTTGAAGGCTAGGGAAACTGCTATTTCTTGTGCCGACAAGTTGTTCACTGCTCATAAATATTTCTTAGACTTCTTGAAATCCCCAAGTCCTGCTATCCGTTCAGCCACATATTCTGTATTGAGTAGTTTTATAAAAAACGTCCCTCAAGCCTTTAATGAAGGAAATATGAAAACTCTTGCTGCTGCACTATTAGGTGGATTTCAGGAGAAGGATCCTGCTTGTCATTCATCAATGTGGGATGCAATTTTACTGTTTTCTAAAAAATTTCCTGAAAGTTGGACTTCTGTCAATGTACAGAAAACTGTACTGAATCGGTTTTGGGATTTCCTTAGAAATAGGTGCTTTGGATCTCAACAGGTTTCTTATCCATCTTTGGTTCTATTCTTACACACCGTGCCATCTAAAGCAGTCGTTGCAGAAACTTTTTTTCTTGAATTCTTCAAGAACCTCTGGGCAGGAAGGAATCCATCGCATTCCTTAAATGCAGATAGAGTGGCATTTTTTCGAGCATTACAAGAATGCTTTCTTTGGGCATTGCATAATGCCTCAAGATATTGCAATGGAGTGGATTCCATCAGTGATTTTCGAGCAACTCTTGTTAAAAATGTTCTGGTAAAGCTTTTGTGGCAAGACTACATTTTCTCTAGTAGCTCAAGAAAGGAGGAGAAAACATCCCCCGGATTATCAGTAGATTCATGTGAAAGTGATTTAGCTTCCAACAAGAAGACAGTTGAAACATTGAATATCACGTACCCAATGAGCTACTTTAGAGAGTTGGCAAATTGCATTGTTGGGGTTCTTTCAGGCATTGATTTGCTGGAGCATGATTTGCTCTCAGTTTTTGCTGCAGAATTTCAGGAGAATTGTCAGAGTTTCTTTCAGCATGCTAGTAACTTGGAAAGAGAAAGTGAGTTTGCGGAGCGAGTTATACAGTTTATATCATTACTTGGAGAACATGCAATGCAGAATGGTCGAGGTTGGCCTTTGGCTTCTCTAGTTGGACCAATGTTGGCTAATTCCTTTACATTGATGAGATCACATGATTCACCAAGTTGTGTGAAGATTCTAGCAGCGGCTGTTTCTGTATTTGGACCTCACAAGATAGTCCACGAACTTCTTATTCACAATACGTCTCCACATAGTTATTCTCCTGATGAGGGTGACAGAGCATTAGAGGAAGATAGATTCCTGCAAATGTTCAATGGAACTTTTGTTCCATGGTGTCTTAGTGGGAATAGTTACTCTTTAAGTGCTCGTGTTGACCTGTTACTTGCATTGCTTGATGATGAATATTTCACTGAGCAGTGGGATAGTGTTATCAGATATGCCACTAACCTGGAGCATTCTGGATCTGCACCCTGCTCTTTAGATTCTGACCGGATAACTATCTTAGCACTGCTTTTACAGAAAGTAAGAAACAGAATCACAAACACAAAGGTAGGAGTTTCCATCAGCACAAAAATGGGCAACCCAGATCATTGGCATCATGAGCTTCTAGAATCAACTGCTGTTGCTGTTGCTCGATGCTCTCCTCCTCTCGGAGCTTCTAATTCTCAATTCTTGTGGTATGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

780

Amino Acids

86.67

Weight (kDa)

6.51

Isoelectric Point (pI)

44.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ltn1_1st PF22958 59 - 386 3.6e-91 E3 ubiquitin-protein ligase listerin, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011193)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G58410 AT5G58410
fragaria_vesca FvH4_3g39950 FvH4_3g39950 FvH4_3g39950
malus_domestica MD03G1058100.v1.1
prunus_persica Prupe.6G045900_v2.0.a1 Prupe.6G045900_v2.0.a1 Prupe.6G045900_v2.0.a1
pyrus_communis pycom03g04640
rosa_chinensis RchiOBHm_Chr5g0071961
rosa_laevigata RLG00000036266
rosa_multiflora Rmu_sc0012806.1_g000004
rosa_roxburghii Rroxscaffold_1G00009240
rosa_rugosa Rorug05G0415700
rosa_samantha Rh5AG471700 Rh5BG491700 Rh5CG515500 Rh5DG503100
rosa_wichuraiana Rw5G043850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 899
AarI CACCTGC 1 cut(s) 649
Acc36I ACCTGC 1 cut(s) 649
AccB1I GGYRCC 1 cut(s) 734
AciI CCGC 9 cut(s) 40, 62, 92, 95, 296, 358, 602, 1685, 1841
AclWI GGATC 5 cut(s) 215, 974, 987, 1123, 2125
AcoI YGGCCR 2 cut(s) 297, 687
AcsI RAATTY 3 cut(s) 1031, 1202, 1619
AcuI CTGAAG 1 cut(s) 495
AcyI GRCGYC 1 cut(s) 65
AdeI CACNNNGTG 1 cut(s) 1162
AfaI GTAC 3 cut(s) 1062, 1074, 1520
AfiI CCNNNNNNNGG 5 cut(s) 146, 311, 402, 1925, 2306
AjnI CCWGG 3 cut(s) 129, 730, 2103
AloI GAACNNNNNNTCC 4 cut(s) 1965, 1966, 1997, 1998
Alw21I GWGCWC 1 cut(s) 2023
Alw26I GTCTC 4 cut(s) 12, 475, 526, 1905
AlwI GGATC 5 cut(s) 215, 974, 987, 1123, 2125
AlwNI CAGNNNCTG 2 cut(s) 473, 1844
AoxI GGCC 5 cut(s) 36, 161, 297, 687, 1748
ApeKI GCWGC 6 cut(s) 488, 749, 947, 950, 1613, 1838
ApoI RAATTY 3 cut(s) 1031, 1202, 1619
Asp700I GAANNNNTTC 1 cut(s) 1290
AspLEI GCGC 1 cut(s) 418
AspS9I GGNCC 5 cut(s) 37, 162, 440, 1769, 1859
AsuC2I CCSGG 1 cut(s) 1446
AsuHPI GGTGA 4 cut(s) 385, 673, 1806, 1940
AvaII GGWCC 3 cut(s) 440, 1769, 1859
BalI TGGCCA 1 cut(s) 689
BamHI GGATCC 1 cut(s) 979
BanI GGYRCC 1 cut(s) 734
BauI CACGAG 1 cut(s) 2022
BbsI GAAGAC 1 cut(s) 1499
Bbv12I GWGCWC 1 cut(s) 2023
BbvI GCAGC 6 cut(s) 475, 736, 934, 937, 1600, 1850
BccI CCATC 6 cut(s) 430, 1144, 1174, 1243, 1349, 2225
BceAI ACGGC 2 cut(s) 61, 573
BcgI CGANNNNNNTGC 2 cut(s) 1721, 1755
BciT130I CCWGG 3 cut(s) 131, 732, 2105
BcnI CCSGG 1 cut(s) 1446
BcoDI GTCTC 4 cut(s) 12, 475, 526, 1905
BfaI CTAG 9 cut(s) 27, 536, 722, 777, 1413, 1656, 1763, 1835, 2264
BfmI CTRYAG 1 cut(s) 1614
BfoI RGCGCY 1 cut(s) 419
BfuAI ACCTGC 1 cut(s) 649
Bme1390I CCNGG 4 cut(s) 131, 732, 1446, 2105
Bme18I GGWCC 3 cut(s) 440, 1769, 1859
BmgT120I GGNCC 5 cut(s) 37, 162, 440, 1769, 1859
BmiI GGNNCC 3 cut(s) 441, 736, 981
BmrFI CCNGG 4 cut(s) 131, 732, 1446, 2105
BmrI ACTGGG 1 cut(s) 461
BmsI GCATC 8 cut(s) 124, 257, 529, 639, 661, 997, 2260, 2282
BmuI ACTGGG 1 cut(s) 461
BoxI GACNNNNGTC 1 cut(s) 1052
BpiI GAAGAC 1 cut(s) 1499
BpmI CTGGAG 3 cut(s) 507, 1607, 2126
BpuEI CTTGAG 4 cut(s) 468, 897, 1300, 1405
BpuMI CCSGG 1 cut(s) 1446
BsaAI YACGTR 1 cut(s) 1518
BsaBI GATNNNNATC 1 cut(s) 2153
BsaHI GRCGYC 1 cut(s) 65
BsaJI CCNNGG 3 cut(s) 443, 1444, 1985
BsaWI WCCGGW 1 cut(s) 2145
Bsc4I CCNNNNNNNGG 5 cut(s) 146, 311, 402, 1925, 2306
Bse1I ACTGG 1 cut(s) 467
Bse3DI GCAATG 5 cut(s) 674, 1301, 1333, 1734, 2042
Bse8I GATNNNNATC 1 cut(s) 2153
BseBI CCWGG 3 cut(s) 131, 732, 2105
BseDI CCNNGG 3 cut(s) 443, 1444, 1985
BseGI GGATG 5 cut(s) 139, 358, 640, 1012, 1439
BseJI GATNNNNATC 1 cut(s) 2153
BseLI CCNNNNNNNGG 5 cut(s) 146, 311, 402, 1925, 2306
BseMI GCAATG 5 cut(s) 674, 1301, 1333, 1734, 2042
BseMII CTCAG 3 cut(s) 581, 1617, 2058
BseNI ACTGG 1 cut(s) 467
BseRI GAGGAG 4 cut(s) 129, 1445, 2289, 2292
BseXI GCAGC 6 cut(s) 475, 736, 934, 937, 1600, 1850
BsgI GTGCAG 2 cut(s) 936, 2106
BshFI GGCC 5 cut(s) 38, 163, 299, 689, 1750
BshNI GGYRCC 1 cut(s) 734
BsiHKAI GWGCWC 1 cut(s) 2023
BsiSI CCGG 3 cut(s) 147, 1446, 2146
BslFI GGGAC 2 cut(s) 453, 893
BslI CCNNNNNNNGG 5 cut(s) 146, 311, 402, 1925, 2306
BsmAI GTCTC 4 cut(s) 12, 475, 526, 1905
BsmBI CGTCTC 2 cut(s) 12, 1905
BsmFI GGGAC 2 cut(s) 453, 893
BsmI GAATGC 3 cut(s) 1240, 1292, 2110
BsnI GGCC 5 cut(s) 38, 163, 299, 689, 1750
Bsp1286I GDGCHC 1 cut(s) 2023
Bsp1407I TGTACA 1 cut(s) 1060
Bsp143I GATC 7 cut(s) 220, 497, 979, 1115, 1802, 2117, 2242
Bsp19I CCATGG 1 cut(s) 1985
BspACI CCGC 9 cut(s) 40, 62, 92, 95, 296, 358, 602, 1685, 1841
BspANI GGCC 5 cut(s) 38, 163, 299, 689, 1750
BspCNI CTCAG 3 cut(s) 582, 1616, 2059
BspHI TCATGA 2 cut(s) 370, 2254
BspLI GGNNCC 3 cut(s) 441, 736, 981
BspMAI CTGCAG 1 cut(s) 1618
BspMI ACCTGC 1 cut(s) 649
BspPI GGATC 5 cut(s) 215, 974, 987, 1123, 2125
BspT107I GGYRCC 1 cut(s) 734
BsrDI GCAATG 5 cut(s) 674, 1301, 1333, 1734, 2042
BsrGI TGTACA 1 cut(s) 1060
BsrI ACTGG 1 cut(s) 467
BssECI CCNNGG 3 cut(s) 443, 1444, 1985
BssMI GATC 7 cut(s) 220, 497, 979, 1115, 1802, 2117, 2242
BssNI GRCGYC 1 cut(s) 65
BssSI CACGAG 1 cut(s) 2022
BssT1I CCWWGG 1 cut(s) 1985
Bst2BI CACGAG 1 cut(s) 2022
Bst2UI CCWGG 3 cut(s) 131, 732, 2105
Bst4CI ACNGT 8 cut(s) 264, 400, 444, 1020, 1072, 1162, 1498, 1701
Bst6I CTCTTC 1 cut(s) 197
BstACI GRCGYC 1 cut(s) 65
BstAPI GCANNNNNTGC 3 cut(s) 649, 1181, 1597
BstAUI TGTACA 1 cut(s) 1060
BstBAI YACGTR 1 cut(s) 1518
BstC8I GCNNGC 5 cut(s) 40, 210, 363, 681, 1653
BstDEI CTNAG 7 cut(s) 590, 832, 1097, 1603, 1994, 2067, 2158
BstDSI CCRYGG 2 cut(s) 443, 1985
BstF5I GGATG 5 cut(s) 139, 358, 640, 1012, 1439
BstH2I RGCGCY 1 cut(s) 419
BstHHI GCGC 1 cut(s) 418
BstKTI GATC 7 cut(s) 223, 500, 982, 1118, 1805, 2120, 2245
BstMAI GTCTC 4 cut(s) 12, 475, 526, 1905
BstMBI GATC 7 cut(s) 220, 497, 979, 1115, 1802, 2117, 2242
BstNI CCWGG 3 cut(s) 131, 732, 2105
BstNSI RCATGY 3 cut(s) 767, 1655, 1727
BstPAI GACNNNNGTC 1 cut(s) 1052
BstSCI CCNGG 4 cut(s) 129, 730, 1444, 2103
BstSFI CTRYAG 1 cut(s) 1614
BstV1I GCAGC 6 cut(s) 475, 736, 934, 937, 1600, 1850
BstV2I GAAGAC 1 cut(s) 1499
BstX2I RGATCY 4 cut(s) 220, 979, 1115, 2117
BstXI CCANNNNNNTGG 2 cut(s) 2104, 2247
BstYI RGATCY 4 cut(s) 220, 979, 1115, 2117
BsuRI GGCC 5 cut(s) 38, 163, 299, 689, 1750
BtgI CCRYGG 2 cut(s) 443, 1985
BtgZI GCGATG 2 cut(s) 165, 1221
BtsCI GGATG 5 cut(s) 139, 358, 640, 1012, 1439
BtsI GCAGTG 3 cut(s) 813, 2078, 2162
BtsIMutI CAGTG 6 cut(s) 260, 813, 1351, 2064, 2078, 2162
BveI ACCTGC 1 cut(s) 649
Cac8I GCNNGC 5 cut(s) 40, 210, 363, 681, 1653
CaiI CAGNNNCTG 2 cut(s) 473, 1844
CciI TCATGA 2 cut(s) 370, 2254
CfoI GCGC 1 cut(s) 418
Cfr13I GGNCC 5 cut(s) 37, 162, 440, 1769, 1859
CseI GACGC 1 cut(s) 54
Csp6I GTAC 3 cut(s) 1061, 1073, 1519
CspCI CAANNNNNGTGG 3 cut(s) 679, 714, 2312
CviAII CATG 9 cut(s) 371, 764, 1464, 1592, 1652, 1724, 1808, 1986, 2255
CviQI GTAC 3 cut(s) 1061, 1073, 1519
DdeI CTNAG 7 cut(s) 590, 832, 1097, 1603, 1994, 2067, 2158
DpnI GATC 7 cut(s) 222, 499, 981, 1117, 1804, 2119, 2244
DpnII GATC 7 cut(s) 220, 497, 979, 1115, 1802, 2117, 2242
DraIII CACNNNGTG 1 cut(s) 1162
EaeI YGGCCR 2 cut(s) 297, 687
Eam1104I CTCTTC 1 cut(s) 197
EarI CTCTTC 1 cut(s) 197
Eco130I CCWWGG 1 cut(s) 1985
Eco32I GATATC 1 cut(s) 666
Eco47I GGWCC 3 cut(s) 440, 1769, 1859
Eco57I CTGAAG 1 cut(s) 495
EcoO109I RGGNCCY 1 cut(s) 162
EcoRI GAATTC 1 cut(s) 1202
EcoRII CCWGG 3 cut(s) 129, 730, 2103
EcoRV GATATC 1 cut(s) 666
EcoT14I CCWWGG 1 cut(s) 1985
EcoT22I ATGCAT 1 cut(s) 654
ErhI CCWWGG 1 cut(s) 1985
Esp3I CGTCTC 2 cut(s) 12, 1905
FaeI CATG 9 cut(s) 374, 767, 1467, 1595, 1655, 1727, 1811, 1989, 2258
FalI AAGNNNNNCTT 2 cut(s) 1033, 1065
FaqI GGGAC 2 cut(s) 453, 893
FatI CATG 9 cut(s) 370, 763, 1463, 1591, 1651, 1723, 1807, 1985, 2254
FauI CCCGC 1 cut(s) 47
FokI GGATG 5 cut(s) 146, 365, 647, 1019, 1426
FspBI CTAG 9 cut(s) 27, 536, 722, 777, 1413, 1656, 1763, 1835, 2264
GlaI GCGC 1 cut(s) 417
GsuI CTGGAG 3 cut(s) 507, 1607, 2126
HaeII RGCGCY 1 cut(s) 419
HaeIII GGCC 5 cut(s) 38, 163, 299, 689, 1750
HapII CCGG 3 cut(s) 147, 1446, 2146
HgaI GACGC 1 cut(s) 54
HhaI GCGC 1 cut(s) 418
Hin1I GRCGYC 1 cut(s) 65
Hin1II CATG 9 cut(s) 374, 767, 1467, 1595, 1655, 1727, 1811, 1989, 2258
Hin6I GCGC 1 cut(s) 416
HinP1I GCGC 1 cut(s) 416
HincII GTYRAC 1 cut(s) 2029
HindII GTYRAC 1 cut(s) 2029
HindIII AAGCTT 3 cut(s) 233, 240, 1385
HpaII CCGG 3 cut(s) 147, 1446, 2146
HphI GGTGA 4 cut(s) 385, 673, 1806, 1940
Hpy166II GTNNAC 5 cut(s) 279, 340, 813, 1876, 2029
Hpy188I TCNGA 8 cut(s) 119, 475, 591, 616, 1638, 2090, 2143, 2309
Hpy8I GTNNAC 5 cut(s) 279, 340, 813, 1876, 2029
Hpy99I CGWCG 3 cut(s) 70, 82, 119
HpyAV CCTTC 9 cut(s) 7, 54, 153, 262, 277, 766, 920, 970, 1221
HpyCH4III ACNGT 8 cut(s) 264, 400, 444, 1020, 1072, 1162, 1498, 1701
HpyCH4IV ACGT 4 cut(s) 114, 906, 1517, 1898
HpyF3I CTNAG 7 cut(s) 590, 832, 1097, 1603, 1994, 2067, 2158
HpySE526I ACGT 4 cut(s) 114, 906, 1517, 1898
Hsp92I GRCGYC 1 cut(s) 65
Hsp92II CATG 9 cut(s) 374, 767, 1467, 1595, 1655, 1727, 1811, 1989, 2258
HspAI GCGC 1 cut(s) 416
Kzo9I GATC 7 cut(s) 220, 497, 979, 1115, 1802, 2117, 2242
LmnI GCTCC 8 cut(s) 23, 30, 142, 526, 1588, 1687, 2107, 2309
Lsp1109I GCAGC 6 cut(s) 475, 736, 934, 937, 1600, 1850
LweI GCATC 8 cut(s) 124, 257, 529, 639, 661, 997, 2260, 2282
MaeI CTAG 9 cut(s) 27, 536, 722, 777, 1413, 1656, 1763, 1835, 2264
MaeII ACGT 4 cut(s) 114, 906, 1517, 1898
MaeIII GTNAC 5 cut(s) 391, 1658, 1928, 2006, 2034
MalI GATC 7 cut(s) 222, 499, 981, 1117, 1804, 2119, 2244
MboI GATC 7 cut(s) 220, 497, 979, 1115, 1802, 2117, 2242
MboII GAAGA 7 cut(s) 214, 593, 660, 1198, 1504, 1840, 1958
MflI RGATCY 4 cut(s) 220, 979, 1115, 2117
MhlI GDGCHC 1 cut(s) 2023
MlsI TGGCCA 1 cut(s) 689
MluNI TGGCCA 1 cut(s) 689
MmeI TCCRAC 4 cut(s) 97, 1025, 1509, 1747
Mox20I TGGCCA 1 cut(s) 689
Mph1103I ATGCAT 1 cut(s) 654
MroXI GAANNNNTTC 1 cut(s) 1290
MscI TGGCCA 1 cut(s) 689
MseI TTAA 6 cut(s) 237, 545, 921, 1247, 1368, 2015
MslI CAYNNNNRTG 2 cut(s) 1000, 2228
Msp20I TGGCCA 1 cut(s) 689
MspA1I CMGCKG 2 cut(s) 424, 1841
MspI CCGG 3 cut(s) 147, 1446, 2146
MspR9I CCNGG 4 cut(s) 131, 732, 1446, 2105
Mva1269I GAATGC 3 cut(s) 1240, 1292, 2110
MvaI CCWGG 3 cut(s) 131, 732, 2105
NciI CCSGG 1 cut(s) 1446
NcoI CCATGG 1 cut(s) 1985
NdeII GATC 7 cut(s) 220, 497, 979, 1115, 1802, 2117, 2242
NlaIII CATG 9 cut(s) 374, 767, 1467, 1595, 1655, 1727, 1811, 1989, 2258
NlaIV GGNNCC 3 cut(s) 441, 736, 981
NmuCI GTSAC 2 cut(s) 391, 1928
NsiI ATGCAT 1 cut(s) 654
NspI RCATGY 3 cut(s) 767, 1655, 1727
PaeI GCATGC 1 cut(s) 1655
PagI TCATGA 2 cut(s) 370, 2254
PaqCI CACCTGC 1 cut(s) 649
PcsI WCGNNNNNNNCGW 2 cut(s) 74, 111
PctI GAATGC 3 cut(s) 1240, 1292, 2110
PdmI GAANNNNTTC 1 cut(s) 1290
PflFI GACNNNGTC 1 cut(s) 467
Ppu21I YACGTR 1 cut(s) 1518
PshAI GACNNNNGTC 1 cut(s) 1052
PsiI TTATAA 1 cut(s) 899
Psp6I CCWGG 3 cut(s) 129, 730, 2103
PspGI CCWGG 3 cut(s) 129, 730, 2103
PspN4I GGNNCC 3 cut(s) 441, 736, 981
PspPI GGNCC 5 cut(s) 37, 162, 440, 1769, 1859
PstI CTGCAG 1 cut(s) 1618
PstNI CAGNNNCTG 2 cut(s) 473, 1844
PsuI RGATCY 4 cut(s) 220, 979, 1115, 2117
PsyI GACNNNGTC 1 cut(s) 467
PvuII CAGCTG 1 cut(s) 424
RsaI GTAC 3 cut(s) 1062, 1074, 1520
RsaNI GTAC 3 cut(s) 1061, 1073, 1519
RseI CAYNNNNRTG 2 cut(s) 1000, 2228
SaqAI TTAA 6 cut(s) 237, 545, 921, 1247, 1368, 2015
Sau3AI GATC 7 cut(s) 220, 497, 979, 1115, 1802, 2117, 2242
Sau96I GGNCC 5 cut(s) 37, 162, 440, 1769, 1859
ScrFI CCNGG 4 cut(s) 131, 732, 1446, 2105
SduI GDGCHC 1 cut(s) 2023
SfaNI GCATC 8 cut(s) 124, 257, 529, 639, 661, 997, 2260, 2282
SfcI CTRYAG 1 cut(s) 1614
SinI GGWCC 3 cut(s) 440, 1769, 1859
SmiMI CAYNNNNRTG 2 cut(s) 1000, 2228
SmlI CTYRAG 4 cut(s) 483, 912, 1315, 1420
SmoI CTYRAG 4 cut(s) 483, 912, 1315, 1420
SphI GCATGC 1 cut(s) 1655
SsiI CCGC 9 cut(s) 40, 62, 92, 95, 296, 358, 602, 1685, 1841
SspI AATATT 2 cut(s) 827, 2060
SspMI CTAG 9 cut(s) 27, 536, 722, 777, 1413, 1656, 1763, 1835, 2264
StyD4I CCNGG 4 cut(s) 129, 730, 1444, 2103
StyI CCWWGG 1 cut(s) 1985
TaaI ACNGT 8 cut(s) 264, 400, 444, 1020, 1072, 1162, 1498, 1701
TaiI ACGT 4 cut(s) 117, 909, 1520, 1901
TaqI TCGA 4 cut(s) 1273, 1354, 1741, 2290
TatI WGTACW 2 cut(s) 1060, 1072
TauI GCSGC 5 cut(s) 65, 95, 299, 361, 1844
Tru1I TTAA 6 cut(s) 237, 545, 921, 1247, 1368, 2015
Tru9I TTAA 6 cut(s) 237, 545, 921, 1247, 1368, 2015
TscAI CASTG 6 cut(s) 267, 820, 1351, 2071, 2078, 2169
TseFI GTSAC 2 cut(s) 391, 1928
TseI GCWGC 6 cut(s) 488, 749, 947, 950, 1613, 1838
Tsp45I GTSAC 2 cut(s) 391, 1928
TspDTI ATGAA 7 cut(s) 651, 660, 939, 950, 984, 1452, 2070
TspGWI ACGGA 2 cut(s) 36, 854
TspRI CASTG 6 cut(s) 267, 820, 1351, 2071, 2078, 2169
Tth111I GACNNNGTC 1 cut(s) 467
VpaK11BI GGWCC 3 cut(s) 440, 1769, 1859
XapI RAATTY 3 cut(s) 1031, 1202, 1619
XbaI TCTAGA 1 cut(s) 2263
XceI RCATGY 3 cut(s) 767, 1655, 1727
XmnI GAANNNNTTC 1 cut(s) 1290
XspI CTAG 9 cut(s) 27, 536, 722, 777, 1413, 1656, 1763, 1835, 2264
Zsp2I ATGCAT 1 cut(s) 654
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.