Rh5DG000900

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0016277
Physical Location & Seq
Reverse (-)
90557 .. 92995
2439 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG000900.1

Sequence Viewer

Length: 1767 bp
ATGTCATCCTTTGCTTTCCGTCCCCGTCTTTGGAAGCTTCCCGCCATAGTTCAAACCCTAAGACAGTTGAATGCTTCTGCTCAGGTGGAGCCAAACTTGAATTCGATTGAAGCCGGTCGTCGTCGTCGTCAAAAGCCAAACCTGAGTCTTTGGTATAAAAGTGATACATATAGCTGTAACTGTGAGATTATAAATCTCGGGCGCTGTGGCAAAGTGAAAGATGCAAGGAAGCTGTTCGACGATATGCCTCAACGAGATGCTGTCTCTTATGCGTCCATGATCAATGTTTACTTGAAGAACGATGATCTTCCCAATGCACAGAGGCTCTTTCAGGCCATGCCCACCAGTAATATTGTTGCTGAATCTGAATCTGCAATGGTTAGTGGTTATGTCAAGGCAGGCCGTATAGCTGAGGCTCGTCAAGTTTTTGATCGCATGGAGAACAGAAATGTGTATTCTTGGACCAGTTTGATATCCGGGTATCTCAGTTGCGGACAAGTTGACGAGGCCCGTCGGCTTTTTGGTCGTATGCCTGTCAAAAATGTGGTGTCCTGGACTACTATGATCCTGGGTTACGCTCGCAACAACATGATTGACGAAGCGCGCCGTGTGTTTAACCTTATGCCTGAAAGGAACACAGTCTCATGGACAGTTATGATCAAGGCTCTTATTGAGAATGATCAATTTGATGACGCACTTAGCCTCTTCAATGATATGCCACAACGGAACCTATATTCTTGGAACATCATAATCTTGGGTCTTCTTAATGCAAATAGAGTAAGTGAAGCCATCAAACTCTTCAGTTCAATGCCTCAGAGGAATGCAATTTCTTGGACTATTATGGTTACGGGGTTGGCACATAACAAGATGACTAAACTTGCAAGAGAGTACTTCGATCCAATGCCTAACAAAGATGTAGCTGCCTGGAATGCTATGATTGCATCATATGTTGACGAAGGCCTCATGGCAGAAGCCGGTGAGCTATTCAGTTTCATGCACGAAAGAAATGTTGTTACTTGGAATCTGATGATTGATGGTTATACTAAAAATGGGCCAAAGGAACAAGCCTTAAAGCACCTAATTCTGATGCTTCGGTTTTGCTTTAGACCTAATAGGACTACCATCGCTCGCGTATTGAGCTCATGCGAGGACATGATGGAGCTAATGCAAGCTCATGCACTGGTCCTATCACATGGGTTTGAGCATGACACAGTCGTTGTGAATACACTAGTCACTATGTATTCCAGAAATGGAGATGTTACTTCTGCTAGGTTTGTTTTTGATCATCTTGGGGCTAAGGATGTGGCATCATGGAATGCAATGATATTAGCATATTCAAATCATGGATATGGTCACCATGCATTTCAGGTCTTCGCACACATGTTGAGATCAGGAGCCAAGCCAGATGAAATTACTTTTGTTGGAGTCTTATCAGTTTGTAGTCATGCTGGTCTTGTCAACAAAGGTCAAAGGCTTTTCAATTCAATGAACCATGTTTATGATATAGAACCAAAGGCCCAGCACTATTCCTGCCTTGTGGACATCTTAGGCCGAGCAGGACTAGTGGATGAGGCTACGAAGGTAGTACGCATGATGCCTGCTTCTGAGAAGGATGCTGCTGTTCTAGGAGCATTGCTTGGTGCTTATAGGTTCCATGGAAATATTACAATGGCAAGTCTTATTGGAGAGGCACTTCAAGAGCTAGAGCCAGGTAGCTCTGGGGGGTATGTACTCTTAGCTATAATTTATGCTGCACGTGGAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR

Protein Analysis

588

Amino Acids

66.14

Weight (kDa)

8.83

Isoelectric Point (pI)

41.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 149 - 182 9.9e-06 PPR repeat family
PPR PF01535 152 - 181 3.8e-07 PPR repeat
PPR_2 PF13041 180 - 212 5.3e-07 PPR repeat family
PPR PF01535 183 - 212 2.6e-07 PPR repeat
PPR_2 PF13041 211 - 244 2.3e-07 PPR repeat family
PPR PF01535 214 - 243 8.4e-06 PPR repeat
PPR_2 PF13041 243 - 287 4.1e-07 PPR repeat family
PPR_long PF17177 412 - 536 3.9e-07 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 433 - 481 2.5e-10 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016277)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g00100
malus_domestica MD05G1364000.v1.1
prunus_persica Prupe.4G001100_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0000131
rosa_laevigata RLG00000030844
rosa_multiflora Rmu_co8477805.1_g000001 Rmu_sc0003125.1_g000003 Rmu_ssc0000243.1_g000018
rosa_roxburghii Rroxscaffold_1G00075970
rosa_rugosa Rorug04G0381800
rosa_samantha Rh5AG000900 Rh5BG002100 Rh5CG001000 Rh5DG000900
rosa_wichuraiana Rw5G000120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 191
AccII CGCG 2 cut(s) 604, 1131
AciI CCGC 2 cut(s) 42, 492
AclWI GGATC 2 cut(s) 559, 890
AcsI RAATTY 1 cut(s) 100
AcuI CTGAAG 1 cut(s) 784
AcvI CACGTG 1 cut(s) 1757
AfaI GTAC 3 cut(s) 890, 1587, 1731
AfiI CCNNNNNNNGG 1 cut(s) 30
AflIII ACRYGT 1 cut(s) 1380
AhlI ACTAGT 2 cut(s) 1228, 1561
AjnI CCWGG 4 cut(s) 551, 567, 923, 1708
AjuI GAANNNNNNNTTGG 2 cut(s) 85, 117
Alw21I GWGCWC 1 cut(s) 1142
Alw26I GTCTC 2 cut(s) 268, 646
AlwI GGATC 2 cut(s) 559, 890
Ama87I CYCGRG 1 cut(s) 197
AoxI GGCC 7 cut(s) 333, 400, 507, 958, 1052, 1515, 1549
ApeKI GCWGC 3 cut(s) 920, 1616, 1751
ApoI RAATTY 1 cut(s) 100
Asp700I GAANNNNTTC 1 cut(s) 233
AspLEI GCGC 3 cut(s) 204, 604, 606
AspS9I GGNCC 5 cut(s) 462, 508, 1052, 1183, 1516
AsuC2I CCSGG 1 cut(s) 478
AsuHPI GGTGA 2 cut(s) 989, 1346
AvaI CYCGRG 1 cut(s) 197
AvaII GGWCC 2 cut(s) 462, 1183
BanII GRGCYC 1 cut(s) 1142
BbrPI CACGTG 1 cut(s) 1757
BbsI GAAGAC 2 cut(s) 752, 1363
Bbv12I GWGCWC 1 cut(s) 1142
BbvCI CCTCAGC 1 cut(s) 411
BbvI GCAGC 3 cut(s) 907, 1603, 1738
BccI CCATC 4 cut(s) 797, 1028, 1130, 1150
BceAI ACGGC 2 cut(s) 387, 591
BciT130I CCWGG 4 cut(s) 553, 569, 925, 1710
BclI TGATCA 4 cut(s) 279, 657, 679, 1282
BcnI CCSGG 1 cut(s) 478
BcoDI GTCTC 2 cut(s) 268, 646
BcuI ACTAGT 2 cut(s) 1228, 1561
BfaI CTAG 5 cut(s) 1229, 1269, 1562, 1625, 1703
BfoI RGCGCY 1 cut(s) 205
BisI GCNGC 3 cut(s) 921, 1617, 1752
BlsI GCNGC 3 cut(s) 922, 1618, 1753
BmcAI AGTACT 1 cut(s) 890
Bme1390I CCNGG 5 cut(s) 478, 553, 569, 925, 1710
Bme18I GGWCC 2 cut(s) 462, 1183
BmeT110I CYCGRG 1 cut(s) 197
BmgT120I GGNCC 5 cut(s) 462, 508, 1052, 1183, 1516
BmiI GGNNCC 4 cut(s) 90, 728, 1396, 1652
BmrFI CCNGG 5 cut(s) 478, 553, 569, 925, 1710
BmsI GCATC 7 cut(s) 211, 247, 950, 1077, 1316, 1584, 1603
BpiI GAAGAC 2 cut(s) 752, 1363
Bpu10I CCTNAGC 3 cut(s) 81, 411, 1296
BpuMI CCSGG 1 cut(s) 478
BsaAI YACGTR 1 cut(s) 1757
BsaJI CCNNGG 2 cut(s) 568, 1654
Bsc4I CCNNNNNNNGG 1 cut(s) 30
Bse118I RCCGGY 2 cut(s) 113, 974
Bse1I ACTGG 3 cut(s) 345, 465, 1185
Bse3DI GCAATG 3 cut(s) 381, 1326, 1631
BseBI CCWGG 4 cut(s) 553, 569, 925, 1710
BseDI CCNNGG 2 cut(s) 568, 1654
BseGI GGATG 4 cut(s) 5, 1306, 1573, 1618
BseLI CCNNNNNNNGG 1 cut(s) 30
BseMI GCAATG 3 cut(s) 381, 1326, 1631
BseMII CTCAG 6 cut(s) 95, 134, 402, 499, 827, 1596
BseNI ACTGG 3 cut(s) 345, 465, 1185
BsePI GCGCGC 1 cut(s) 602
BseXI GCAGC 3 cut(s) 907, 1603, 1738
BseYI CCCAGC 1 cut(s) 1518
BsgI GTGCAG 1 cut(s) 1737
Bsh1236I CGCG 2 cut(s) 604, 1131
Bsh1285I CGRYCG 1 cut(s) 118
BshFI GGCC 7 cut(s) 335, 402, 509, 960, 1054, 1517, 1551
BsiEI CGRYCG 1 cut(s) 118
BsiHKAI GWGCWC 1 cut(s) 1142
BsiHKCI CYCGRG 1 cut(s) 197
BsiSI CCGG 3 cut(s) 114, 477, 975
BslFI GGGAC 1 cut(s) 6
BslI CCNNNNNNNGG 1 cut(s) 30
BsmAI GTCTC 2 cut(s) 268, 646
BsmFI GGGAC 1 cut(s) 6
BsmI GAATGC 4 cut(s) 76, 826, 934, 1321
BsnI GGCC 7 cut(s) 335, 402, 509, 960, 1054, 1517, 1551
BsoBI CYCGRG 1 cut(s) 197
Bsp1286I GDGCHC 1 cut(s) 1142
Bsp143I GATC 9 cut(s) 279, 304, 430, 564, 657, 679, 895, 1282, 1388
Bsp19I CCATGG 1 cut(s) 1654
BspACI CCGC 2 cut(s) 42, 492
BspANI GGCC 7 cut(s) 335, 402, 509, 960, 1054, 1517, 1551
BspCNI CTCAG 6 cut(s) 94, 135, 403, 498, 826, 1597
BspFNI CGCG 2 cut(s) 604, 1131
BspLI GGNNCC 4 cut(s) 90, 728, 1396, 1652
BspPI GGATC 2 cut(s) 559, 890
BsrDI GCAATG 3 cut(s) 381, 1326, 1631
BsrFI RCCGGY 2 cut(s) 113, 974
BsrI ACTGG 3 cut(s) 345, 465, 1185
BssAI RCCGGY 2 cut(s) 113, 974
BssECI CCNNGG 2 cut(s) 568, 1654
BssHII GCGCGC 1 cut(s) 602
BssMI GATC 9 cut(s) 279, 304, 430, 564, 657, 679, 895, 1282, 1388
BssT1I CCWWGG 1 cut(s) 1654
Bst2UI CCWGG 4 cut(s) 553, 569, 925, 1710
Bst4CI ACNGT 5 cut(s) 66, 182, 640, 652, 1213
Bst6I CTCTTC 2 cut(s) 710, 803
BstBAI YACGTR 1 cut(s) 1757
BstC8I GCNNGC 6 cut(s) 400, 580, 604, 1129, 1170, 1599
BstDSI CCRYGG 1 cut(s) 1654
BstEII GGTNACC 1 cut(s) 1352
BstF5I GGATG 4 cut(s) 5, 1306, 1573, 1618
BstFNI CGCG 2 cut(s) 604, 1131
BstH2I RGCGCY 1 cut(s) 205
BstHHI GCGC 3 cut(s) 204, 604, 606
BstKTI GATC 9 cut(s) 282, 307, 433, 567, 660, 682, 898, 1285, 1391
BstMAI GTCTC 2 cut(s) 268, 646
BstMBI GATC 9 cut(s) 279, 304, 430, 564, 657, 679, 895, 1282, 1388
BstMCI CGRYCG 1 cut(s) 118
BstMWI GCNNNNNNNGC 3 cut(s) 929, 938, 1137
BstNI CCWGG 4 cut(s) 553, 569, 925, 1710
BstNSI RCATGY 1 cut(s) 1384
BstPI GGTNACC 1 cut(s) 1352
BstSCI CCNGG 5 cut(s) 476, 551, 567, 923, 1708
BstUI CGCG 2 cut(s) 604, 1131
BstV1I GCAGC 3 cut(s) 907, 1603, 1738
BstV2I GAAGAC 2 cut(s) 752, 1363
BsuRI GGCC 7 cut(s) 335, 402, 509, 960, 1054, 1517, 1551
BtgI CCRYGG 1 cut(s) 1654
BtgZI GCGATG 1 cut(s) 1108
BtsCI GGATG 4 cut(s) 5, 1306, 1573, 1618
BtsIMutI CAGTG 1 cut(s) 1178
Cac8I GCNNGC 6 cut(s) 400, 580, 604, 1129, 1170, 1599
CfoI GCGC 3 cut(s) 204, 604, 606
Cfr10I RCCGGY 2 cut(s) 113, 974
Cfr13I GGNCC 5 cut(s) 462, 508, 1052, 1183, 1516
CseI GACGC 2 cut(s) 261, 701
Csp6I GTAC 3 cut(s) 889, 1586, 1730
CviQI GTAC 3 cut(s) 889, 1586, 1730
DpnI GATC 9 cut(s) 281, 306, 432, 566, 659, 681, 897, 1284, 1390
DpnII GATC 9 cut(s) 279, 304, 430, 564, 657, 679, 895, 1282, 1388
Eam1104I CTCTTC 2 cut(s) 710, 803
EarI CTCTTC 2 cut(s) 710, 803
Ecl136II GAGCTC 1 cut(s) 1140
Eco130I CCWWGG 1 cut(s) 1654
Eco147I AGGCCT 1 cut(s) 960
Eco24I GRGCYC 1 cut(s) 1142
Eco32I GATATC 1 cut(s) 474
Eco47I GGWCC 2 cut(s) 462, 1183
Eco53kI GAGCTC 1 cut(s) 1140
Eco57I CTGAAG 1 cut(s) 784
Eco72I CACGTG 1 cut(s) 1757
Eco88I CYCGRG 1 cut(s) 197
Eco91I GGTNACC 1 cut(s) 1352
EcoICRI GAGCTC 1 cut(s) 1140
EcoO65I GGTNACC 1 cut(s) 1352
EcoRI GAATTC 1 cut(s) 100
EcoRII CCWGG 4 cut(s) 551, 567, 923, 1708
EcoRV GATATC 1 cut(s) 474
EcoT14I CCWWGG 1 cut(s) 1654
EcoT22I ATGCAT 1 cut(s) 1363
EcoT38I GRGCYC 1 cut(s) 1142
ErhI CCWWGG 1 cut(s) 1654
FaqI GGGAC 1 cut(s) 6
FauI CCCGC 1 cut(s) 49
FauNDI CATATG 1 cut(s) 946
FbaI TGATCA 4 cut(s) 279, 657, 679, 1282
Fnu4HI GCNGC 3 cut(s) 921, 1617, 1752
FokI GGATG 3 cut(s) 1313, 1580, 1625
FriOI GRGCYC 1 cut(s) 1142
Fsp4HI GCNGC 3 cut(s) 921, 1617, 1752
FspBI CTAG 5 cut(s) 1229, 1269, 1562, 1625, 1703
GlaI GCGC 3 cut(s) 203, 603, 605
GluI GCNGC 3 cut(s) 921, 1617, 1752
GsaI CCCAGC 1 cut(s) 1522
HaeII RGCGCY 1 cut(s) 205
HaeIII GGCC 7 cut(s) 335, 402, 509, 960, 1054, 1517, 1551
HapII CCGG 3 cut(s) 114, 477, 975
HgaI GACGC 2 cut(s) 261, 701
HhaI GCGC 3 cut(s) 204, 604, 606
Hin6I GCGC 3 cut(s) 202, 602, 604
HinP1I GCGC 3 cut(s) 202, 602, 604
HincII GTYRAC 3 cut(s) 502, 952, 1459
HindII GTYRAC 3 cut(s) 502, 952, 1459
HindIII AAGCTT 1 cut(s) 35
HinfI GANTC 5 cut(s) 145, 362, 368, 1021, 1425
HpaII CCGG 3 cut(s) 114, 477, 975
HphI GGTGA 2 cut(s) 989, 1346
Hpy166II GTNNAC 5 cut(s) 289, 502, 952, 1459, 1540
Hpy188I TCNGA 5 cut(s) 367, 816, 1026, 1086, 1606
Hpy188III TCNNGA 3 cut(s) 1245, 1392, 1697
Hpy8I GTNNAC 5 cut(s) 289, 502, 952, 1459, 1540
Hpy99I CGWCG 5 cut(s) 123, 126, 129, 242, 516
HpyAV CCTTC 3 cut(s) 950, 1573, 1603
HpyCH4III ACNGT 5 cut(s) 66, 182, 640, 652, 1213
HpyCH4IV ACGT 1 cut(s) 1756
HpyF10VI GCNNNNNNNGC 3 cut(s) 929, 938, 1137
HpySE526I ACGT 1 cut(s) 1756
HspAI GCGC 3 cut(s) 202, 602, 604
Ksp22I TGATCA 4 cut(s) 279, 657, 679, 1282
Kzo9I GATC 9 cut(s) 279, 304, 430, 564, 657, 679, 895, 1282, 1388
LmnI GCTCC 4 cut(s) 88, 1159, 1394, 1628
Lsp1109I GCAGC 3 cut(s) 907, 1603, 1738
LweI GCATC 7 cut(s) 211, 247, 950, 1077, 1316, 1584, 1603
MaeI CTAG 5 cut(s) 1229, 1269, 1562, 1625, 1703
MaeII ACGT 1 cut(s) 1756
MaeIII GTNAC 7 cut(s) 176, 572, 844, 1012, 1231, 1258, 1352
MalI GATC 9 cut(s) 281, 306, 432, 566, 659, 681, 897, 1284, 1390
MboI GATC 9 cut(s) 279, 304, 430, 564, 657, 679, 895, 1282, 1388
MboII GAAGA 6 cut(s) 299, 307, 697, 752, 790, 1363
MhlI GDGCHC 1 cut(s) 1142
MluCI AATT 7 cut(s) 100, 683, 825, 1080, 1410, 1480, 1743
MlyI GAGTC 2 cut(s) 154, 1434
MmeI TCCRAC 1 cut(s) 1402
Mph1103I ATGCAT 1 cut(s) 1363
MroXI GAANNNNTTC 1 cut(s) 233
MseI TTAA 3 cut(s) 615, 765, 1070
MslI CAYNNNNRTG 2 cut(s) 1347, 1497
MspI CCGG 3 cut(s) 114, 477, 975
MspR9I CCNGG 5 cut(s) 478, 553, 569, 925, 1710
Mva1269I GAATGC 4 cut(s) 76, 826, 934, 1321
MvaI CCWGG 4 cut(s) 553, 569, 925, 1710
MvnI CGCG 2 cut(s) 604, 1131
MwoI GCNNNNNNNGC 3 cut(s) 929, 938, 1137
NciI CCSGG 1 cut(s) 478
NcoI CCATGG 1 cut(s) 1654
NdeI CATATG 1 cut(s) 946
NdeII GATC 9 cut(s) 279, 304, 430, 564, 657, 679, 895, 1282, 1388
NlaIV GGNNCC 4 cut(s) 90, 728, 1396, 1652
NmeAIII GCCGAG 1 cut(s) 1577
NmuCI GTSAC 2 cut(s) 1231, 1352
NsiI ATGCAT 1 cut(s) 1363
NspI RCATGY 1 cut(s) 1384
PauI GCGCGC 1 cut(s) 602
PceI AGGCCT 1 cut(s) 960
PciI ACATGT 1 cut(s) 1380
PcsI WCGNNNNNNNCGW 1 cut(s) 124
PctI GAATGC 4 cut(s) 76, 826, 934, 1321
PdmI GAANNNNTTC 1 cut(s) 233
PfeI GAWTC 3 cut(s) 362, 368, 1021
PflFI GACNNNGTC 1 cut(s) 1211
PfoI TCCNGGA 1 cut(s) 551
PkrI GCNGC 3 cut(s) 922, 1618, 1753
PleI GAGTC 2 cut(s) 153, 1433
PmaCI CACGTG 1 cut(s) 1757
PmlI CACGTG 1 cut(s) 1757
PpsI GAGTC 2 cut(s) 153, 1433
Ppu21I YACGTR 1 cut(s) 1757
PscI ACATGT 1 cut(s) 1380
PsiI TTATAA 1 cut(s) 191
Psp124BI GAGCTC 1 cut(s) 1142
Psp6I CCWGG 4 cut(s) 551, 567, 923, 1708
PspCI CACGTG 1 cut(s) 1757
PspEI GGTNACC 1 cut(s) 1352
PspFI CCCAGC 1 cut(s) 1518
PspGI CCWGG 4 cut(s) 551, 567, 923, 1708
PspN4I GGNNCC 4 cut(s) 90, 728, 1396, 1652
PspPI GGNCC 5 cut(s) 462, 508, 1052, 1183, 1516
PsyI GACNNNGTC 1 cut(s) 1211
PteI GCGCGC 1 cut(s) 602
RsaI GTAC 3 cut(s) 890, 1587, 1731
RsaNI GTAC 3 cut(s) 889, 1586, 1730
RseI CAYNNNNRTG 2 cut(s) 1347, 1497
SacI GAGCTC 1 cut(s) 1142
SaqAI TTAA 3 cut(s) 615, 765, 1070
SatI GCNGC 3 cut(s) 921, 1617, 1752
Sau3AI GATC 9 cut(s) 279, 304, 430, 564, 657, 679, 895, 1282, 1388
Sau96I GGNCC 5 cut(s) 462, 508, 1052, 1183, 1516
ScaI AGTACT 1 cut(s) 890
SchI GAGTC 2 cut(s) 154, 1434
ScrFI CCNGG 5 cut(s) 478, 553, 569, 925, 1710
SduI GDGCHC 1 cut(s) 1142
SfaNI GCATC 7 cut(s) 211, 247, 950, 1077, 1316, 1584, 1603
SinI GGWCC 2 cut(s) 462, 1183
SmiMI CAYNNNNRTG 2 cut(s) 1347, 1497
SpeI ACTAGT 2 cut(s) 1228, 1561
Sse9I AATT 7 cut(s) 100, 683, 825, 1080, 1410, 1480, 1743
SseBI AGGCCT 1 cut(s) 960
SsiI CCGC 2 cut(s) 42, 492
SspI AATATT 2 cut(s) 352, 1663
SspMI CTAG 5 cut(s) 1229, 1269, 1562, 1625, 1703
SstI GAGCTC 1 cut(s) 1142
StuI AGGCCT 1 cut(s) 960
StyD4I CCNGG 5 cut(s) 476, 551, 567, 923, 1708
StyI CCWWGG 1 cut(s) 1654
TaaI ACNGT 5 cut(s) 66, 182, 640, 652, 1213
TaiI ACGT 1 cut(s) 1759
TaqI TCGA 3 cut(s) 104, 237, 894
TasI AATT 7 cut(s) 100, 683, 825, 1080, 1410, 1480, 1743
TatI WGTACW 2 cut(s) 888, 1729
TfiI GAWTC 3 cut(s) 362, 368, 1021
Tru1I TTAA 3 cut(s) 615, 765, 1070
Tru9I TTAA 3 cut(s) 615, 765, 1070
TscAI CASTG 1 cut(s) 1185
TseFI GTSAC 2 cut(s) 1231, 1352
TseI GCWGC 3 cut(s) 920, 1616, 1751
Tsp45I GTSAC 2 cut(s) 1231, 1352
TspDTI ATGAA 3 cut(s) 982, 1422, 1502
TspGWI ACGGA 2 cut(s) 8, 739
TspRI CASTG 1 cut(s) 1185
Tth111I GACNNNGTC 1 cut(s) 1211
VpaK11BI GGWCC 2 cut(s) 462, 1183
XapI RAATTY 1 cut(s) 100
XceI RCATGY 1 cut(s) 1384
XmnI GAANNNNTTC 1 cut(s) 233
XspI CTAG 5 cut(s) 1229, 1269, 1562, 1625, 1703
ZrmI AGTACT 1 cut(s) 890
Zsp2I ATGCAT 1 cut(s) 1363
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.