Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0008625

Physical Location & Seq

Genomic Coordinates Forward (+)

27809554 .. 27813265

Gene Structure 3712 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG243000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1332 bp

ATGCAATCCCAAGTGCTCGTTCTCAAGGACTCTTTGAAGCGGGAGTCTGGGAGTAAAGTGCACCATGCTAATATCCAGGCTTCAAAGGCTGTTGCTGACATCATCCGTACAACCTTGGGACCGAGGTCCATGTTAAAGATGCTACTGGATGCTAGTGGAGGTATTGTAGTAACCAATGACGGGAATGCCATTCTGCGAGAATTGGATCTTGCGCACCCAGCAGCAAAGTCGATGATTGAATTAAGCCGCACACAAGATGAAGAAGTCGGTGATGGAACAACATCTGTCATTATTCTTGCTGGTGAGATGTTACACGTTGTCGAAGCATTTATTGACCAGCATTTTCATCCTACTGTCATTTGCCGAGCTTACAATAAAGCCCTGAAAGATGAAAGTTATGATTTAGCCCTTGATGCCACTAGAATAGTTGGAGTGGACCTCGGCCAGGGTTTACGAGAAGTGGATATTAAAAAGTACATCAAGGTTGAGAAGGTTCCTGGTGGCCAGTTGGAAGATTCAGTGGTTCTGAAAGGAGTAATGATTAACAAAGATGTCATTGCTCCTGGAAAAATGAGAAGAAAGATTGTCAATCCGCGGATCATGCTTCTTGATTGTCCTCTTGAGTATAAGAAAGGCGAGAACCAAACAAATGCTGAGTTGCTTAAAGAGGAAGATTGGGGACTCCTCCTGAAGTTAGAAGAAGAATACATTGAGGGCCTCTGTGTGCAGATATTAAAGTTCAAACCAGATGTTGTGATTACAGAAAAGGGGCTCAGTGACCTGGCATGCCATTATCTGAGCAAGGCCGGTGTTACTGCAATTAGGCGGTTGAGAAAAACAGATAATAACAGAATTGCCAAGGCTTGTGGGGCAGTTATTGTCAACAGACCCGATGAACTGCAAGAATCTGAGATTGGTACTGGGGCTGGATTATTTGAGGTTAAAAAAATTGGAGATGAGTTCTTTACATTCATCGTTGATTGCAAAGATCCCAAGGCATGTACAGTACTCTTAAGAGGTCCGAGTAAGGATATGTTAAACGAAGTGGAAAGAAATTTACAGGATGCCATGGCAGTAGCAAGAAATATCCTGAAGAATCCAAAACTTGTTCCTGGTGGTGGTGCTGCAGAGTTAACTGTTTCTGCTACACTGAAGCAAAAGAGCTCATCTATTGAAGGTATAGAAAAGTGGCCATACGAAGCTGCTGCTGTAGCTTTTGAGGCTATACCACGAACATTGGCTCAGAACTGTGGGGTTAATGTCATTAGAACGATGACAGCGCTGCAAGGAAAGGTAGGAGATATTGAAGGTGATGCCCCATCAGCTAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005832 GO:0005975 GO:0006457 GO:0006458 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006884 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0008361 GO:0009311 GO:0009653 GO:0009719 GO:0009725 GO:0009751 GO:0009826 GO:0009987 GO:0009992 GO:0010033 GO:0014070 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019725 GO:0023052 GO:0030104 GO:0032502 GO:0032535 GO:0032989 GO:0032991 GO:0036211 GO:0040007 GO:0042221 GO:0042493 GO:0042592 GO:0043170 GO:0043412 GO:0044183 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0046677 GO:0048589 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051082 GO:0051716 GO:0055082 GO:0060560 GO:0061077 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090066 GO:0101031 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cpn60_TCP1

Protein Analysis

443

Amino Acids

48.33

Weight (kDa)

6.25

Isoelectric Point (pI)

38.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cpn60_TCP1	PF00118	31 - 130	7.9e-40	TCP-1/cpn60 chaperonin family
Cpn60_TCP1	PF00118	135 - 430	4.5e-82	TCP-1/cpn60 chaperonin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008625)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G26360
fragaria_vesca	FvH4_3g15890 FvH4_3g15890
malus_domestica	MD05G1219100.v1.1 MD10G1201400.v1.1
prunus_persica	Prupe.2G068500_v2.0.a1 Prupe.2G068500_v2.0.a1 Prupe.4G141000_v2.0.a1 Prupe.6G064200_v2.0.a1
pyrus_communis	pycom05g20030 pycom10g17240
rosa_chinensis	RchiOBHm_Chr5g0026711
rosa_laevigata	RLG00000032949
rosa_multiflora	Rmu_sc0027336.1_g000001
rosa_roxburghii	Rroxscaffold_1G00052760
rosa_rugosa	Rorug05G0095000
rosa_samantha	Rh4CG005800 Rh5BG185000 Rh5CG204800 Rh5DG187200 Rh5DG243000
rosa_wichuraiana	Rw1G016630 Rw5G017080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	213
AccII	CGCG	1 cut(s)	595
AciI	CCGC	5 cut(s)	40, 247, 593, 595, 826
AclWI	GGATC	3 cut(s)	213, 605, 983
AcoI	YGGCCR	3 cut(s)	442, 502, 1190
AcsI	RAATTY	1 cut(s)	1054
AcuI	CTGAAG	3 cut(s)	710, 1112, 1172
AfaI	GTAC	5 cut(s)	109, 476, 919, 1003, 1008
AfeI	AGCGCT	1 cut(s)	1281
AfiI	CCNNNNNNNGG	3 cut(s)	180, 445, 1118
AflII	CTTAAG	1 cut(s)	1012
AflIII	ACRYGT	1 cut(s)	313
AgsI	TTSAA	6 cut(s)	37, 84, 239, 742, 1175, 1307
AjnI	CCWGG	6 cut(s)	75, 444, 496, 562, 780, 1111
AjuI	GAANNNNNNNTTGG	3 cut(s)	35, 897, 929
AluBI	AGCT	5 cut(s)	368, 1164, 1202, 1214, 1325
AluI	AGCT	5 cut(s)	368, 1164, 1202, 1214, 1325
Alw21I	GWGCWC	3 cut(s)	18, 63, 1166
Alw44I	GTGCAC	1 cut(s)	59
AlwI	GGATC	3 cut(s)	213, 605, 983
Aor51HI	AGCGCT	1 cut(s)	1281
AoxI	GGCC	5 cut(s)	442, 502, 715, 804, 1190
ApaLI	GTGCAC	1 cut(s)	59
ApeKI	GCWGC	5 cut(s)	221, 1124, 1202, 1205, 1282
ApoI	RAATTY	1 cut(s)	1054
AspLEI	GCGC	2 cut(s)	214, 1282
AspS9I	GGNCC	5 cut(s)	119, 126, 436, 715, 1019
AsuHPI	GGTGA	3 cut(s)	281, 314, 1322
AvaII	GGWCC	4 cut(s)	119, 126, 436, 1019
BaeGI	GKGCMC	1 cut(s)	63
BalI	TGGCCA	2 cut(s)	504, 1192
BanII	GRGCYC	2 cut(s)	774, 1166
Bbv12I	GWGCWC	3 cut(s)	18, 63, 1166
BbvI	GCAGC	5 cut(s)	233, 1111, 1189, 1192, 1269
BccI	CCATC	2 cut(s)	266, 1327
BcgI	CGANNNNNNTGC	4 cut(s)	210, 244, 1187, 1221
BciT130I	CCWGG	6 cut(s)	77, 446, 498, 564, 782, 1113
BfaI	CTAG	2 cut(s)	153, 420
BfmI	CTRYAG	2 cut(s)	1125, 1209
BfoI	RGCGCY	1 cut(s)	1283
BfrI	CTTAAG	1 cut(s)	1012
BisI	GCNGC	6 cut(s)	222, 247, 1125, 1203, 1206, 1283
BlsI	GCNGC	6 cut(s)	223, 248, 1126, 1204, 1207, 1284
BmcAI	AGTACT	1 cut(s)	1008
Bme1390I	CCNGG	6 cut(s)	77, 446, 498, 564, 782, 1113
Bme18I	GGWCC	4 cut(s)	119, 126, 436, 1019
BmgT120I	GGNCC	5 cut(s)	119, 126, 436, 715, 1019
BmiI	GGNNCC	2 cut(s)	120, 495
BmrFI	CCNGG	6 cut(s)	77, 446, 498, 564, 782, 1113
BmrI	ACTGGG	1 cut(s)	930
BmsI	GCATC	5 cut(s)	129, 139, 403, 1054, 1303
BmuI	ACTGGG	1 cut(s)	930
BoxI	GACNNNNGTC	1 cut(s)	124
BplI	GAGNNNNNCTC	2 cut(s)	423, 455
BpuEI	CTTGAG	2 cut(s)	8, 641
BsaJI	CCNNGG	8 cut(s)	114, 122, 439, 445, 593, 858, 993, 1068
BsaXI	ACNNNNNCTCC	2 cut(s)	150, 180
Bsc4I	CCNNNNNNNGG	3 cut(s)	180, 445, 1118
Bse118I	RCCGGY	1 cut(s)	806
Bse1I	ACTGG	3 cut(s)	150, 505, 925
Bse3DI	GCAATG	1 cut(s)	555
BseBI	CCWGG	6 cut(s)	77, 446, 498, 564, 782, 1113
BseDI	CCNNGG	8 cut(s)	114, 122, 439, 445, 593, 858, 993, 1068
BseGI	GGATG	4 cut(s)	102, 154, 346, 1069
BseLI	CCNNNNNNNGG	3 cut(s)	180, 445, 1118
BseMI	GCAATG	1 cut(s)	555
BseMII	CTCAG	5 cut(s)	645, 787, 788, 900, 1256
BseNI	ACTGG	3 cut(s)	150, 505, 925
BseRI	GAGGAG	1 cut(s)	674
BseSI	GKGCMC	1 cut(s)	63
BseXI	GCAGC	5 cut(s)	233, 1111, 1189, 1192, 1269
BseYI	CCCAGC	1 cut(s)	217
BsgI	GTGCAG	1 cut(s)	746
Bsh1236I	CGCG	1 cut(s)	595
BshFI	GGCC	5 cut(s)	444, 504, 717, 806, 1192
BsiHKAI	GWGCWC	3 cut(s)	18, 63, 1166
BsiSI	CCGG	1 cut(s)	807
BslFI	GGGAC	2 cut(s)	132, 693
BslI	CCNNNNNNNGG	3 cut(s)	180, 445, 1118
BsmFI	GGGAC	2 cut(s)	132, 693
BsmI	GAATGC	1 cut(s)	190
BsnI	GGCC	5 cut(s)	444, 504, 717, 806, 1192
Bsp1286I	GDGCHC	4 cut(s)	18, 63, 774, 1166
Bsp1407I	TGTACA	1 cut(s)	1001
Bsp143I	GATC	3 cut(s)	205, 597, 988
Bsp19I	CCATGG	1 cut(s)	1068
BspACI	CCGC	5 cut(s)	40, 247, 593, 595, 826
BspANI	GGCC	5 cut(s)	444, 504, 717, 806, 1192
BspCNI	CTCAG	5 cut(s)	646, 786, 789, 901, 1255
BspFNI	CGCG	1 cut(s)	595
BspLI	GGNNCC	2 cut(s)	120, 495
BspMAI	CTGCAG	1 cut(s)	1129
BspPI	GGATC	3 cut(s)	213, 605, 983
BspTI	CTTAAG	1 cut(s)	1012
BsrDI	GCAATG	1 cut(s)	555
BsrFI	RCCGGY	1 cut(s)	806
BsrGI	TGTACA	1 cut(s)	1001
BsrI	ACTGG	3 cut(s)	150, 505, 925
BssAI	RCCGGY	1 cut(s)	806
BssECI	CCNNGG	8 cut(s)	114, 122, 439, 445, 593, 858, 993, 1068
BssMI	GATC	3 cut(s)	205, 597, 988
BssT1I	CCWWGG	4 cut(s)	114, 858, 993, 1068
Bst2UI	CCWGG	6 cut(s)	77, 446, 498, 564, 782, 1113
Bst4CI	ACNGT	4 cut(s)	355, 1006, 1138, 1250
BstAFI	CTTAAG	1 cut(s)	1012
BstAUI	TGTACA	1 cut(s)	1001
BstC8I	GCNNGC	1 cut(s)	787
BstDEI	CTNAG	6 cut(s)	654, 773, 797, 909, 1242, 1326
BstDSI	CCRYGG	2 cut(s)	593, 1068
BstENI	CCTNNNNNAGG	1 cut(s)	443
BstF5I	GGATG	4 cut(s)	102, 154, 346, 1069
BstFNI	CGCG	1 cut(s)	595
BstH2I	RGCGCY	1 cut(s)	1283
BstHHI	GCGC	2 cut(s)	214, 1282
BstKTI	GATC	3 cut(s)	208, 600, 991
BstMBI	GATC	3 cut(s)	205, 597, 988
BstMWI	GCNNNNNNNGC	8 cut(s)	86, 218, 413, 601, 869, 1211, 1220, 1322
BstNI	CCWGG	6 cut(s)	77, 446, 498, 564, 782, 1113
BstNSI	RCATGY	2 cut(s)	789, 1002
BstPAI	GACNNNNGTC	1 cut(s)	124
BstSCI	CCNGG	6 cut(s)	75, 444, 496, 562, 780, 1111
BstSFI	CTRYAG	2 cut(s)	1125, 1209
BstSLI	GKGCMC	1 cut(s)	63
BstUI	CGCG	1 cut(s)	595
BstV1I	GCAGC	5 cut(s)	233, 1111, 1189, 1192, 1269
BstX2I	RGATCY	2 cut(s)	205, 988
BstYI	RGATCY	2 cut(s)	205, 988
BsuRI	GGCC	5 cut(s)	444, 504, 717, 806, 1192
BtgI	CCRYGG	2 cut(s)	593, 1068
BtsCI	GGATG	4 cut(s)	102, 154, 346, 1069
BtsIMutI	CAGTG	3 cut(s)	525, 781, 1148
Cac8I	GCNNGC	1 cut(s)	787
CfoI	GCGC	2 cut(s)	214, 1282
Cfr10I	RCCGGY	1 cut(s)	806
Cfr13I	GGNCC	5 cut(s)	119, 126, 436, 715, 1019
Cfr42I	CCGCGG	1 cut(s)	596
Csp6I	GTAC	5 cut(s)	108, 475, 918, 1002, 1007
CspCI	CAANNNNNGTGG	4 cut(s)	847, 882, 1218, 1253
CviAII	CATG	6 cut(s)	65, 130, 601, 786, 999, 1069
CviQI	GTAC	5 cut(s)	108, 475, 918, 1002, 1007
DdeI	CTNAG	6 cut(s)	654, 773, 797, 909, 1242, 1326
DpnI	GATC	3 cut(s)	207, 599, 990
DpnII	GATC	3 cut(s)	205, 597, 988
EaeI	YGGCCR	3 cut(s)	442, 502, 1190
Ecl136II	GAGCTC	1 cut(s)	1164
Eco130I	CCWWGG	4 cut(s)	114, 858, 993, 1068
Eco24I	GRGCYC	2 cut(s)	774, 1166
Eco47I	GGWCC	4 cut(s)	119, 126, 436, 1019
Eco47III	AGCGCT	1 cut(s)	1281
Eco53kI	GAGCTC	1 cut(s)	1164
Eco57I	CTGAAG	3 cut(s)	710, 1112, 1172
EcoICRI	GAGCTC	1 cut(s)	1164
EcoNI	CCTNNNNNAGG	1 cut(s)	443
EcoO109I	RGGNCCY	1 cut(s)	715
EcoRII	CCWGG	6 cut(s)	75, 444, 496, 562, 780, 1111
EcoT14I	CCWWGG	4 cut(s)	114, 858, 993, 1068
EcoT38I	GRGCYC	2 cut(s)	774, 1166
ErhI	CCWWGG	4 cut(s)	114, 858, 993, 1068
FaeI	CATG	6 cut(s)	68, 133, 604, 789, 1002, 1072
FaqI	GGGAC	2 cut(s)	132, 693
FatI	CATG	6 cut(s)	64, 129, 600, 785, 998, 1068
FauI	CCCGC	1 cut(s)	33
Fnu4HI	GCNGC	6 cut(s)	222, 247, 1125, 1203, 1206, 1283
FokI	GGATG	4 cut(s)	89, 161, 333, 1076
FriOI	GRGCYC	2 cut(s)	774, 1166
Fsp4HI	GCNGC	6 cut(s)	222, 247, 1125, 1203, 1206, 1283
FspBI	CTAG	2 cut(s)	153, 420
FspI	TGCGCA	1 cut(s)	213
GlaI	GCGC	2 cut(s)	213, 1281
GluI	GCNGC	6 cut(s)	222, 247, 1125, 1203, 1206, 1283
GsaI	CCCAGC	1 cut(s)	221
HaeII	RGCGCY	1 cut(s)	1283
HaeIII	GGCC	5 cut(s)	444, 504, 717, 806, 1192
HapII	CCGG	1 cut(s)	807
HhaI	GCGC	2 cut(s)	214, 1282
Hin1II	CATG	6 cut(s)	68, 133, 604, 789, 1002, 1072
Hin6I	GCGC	2 cut(s)	212, 1280
HinP1I	GCGC	2 cut(s)	212, 1280
HincII	GTYRAC	2 cut(s)	883, 1134
HindII	GTYRAC	2 cut(s)	883, 1134
HinfI	GANTC	6 cut(s)	29, 44, 515, 681, 905, 1096
HpaI	GTTAAC	1 cut(s)	1134
HpaII	CCGG	1 cut(s)	807
HphI	GGTGA	3 cut(s)	281, 314, 1322
Hpy166II	GTNNAC	5 cut(s)	61, 436, 452, 883, 1134
Hpy188I	TCNGA	5 cut(s)	528, 798, 910, 1023, 1245
Hpy188III	TCNNGA	4 cut(s)	608, 620, 688, 1090
Hpy8I	GTNNAC	5 cut(s)	61, 436, 452, 883, 1134
HpyAV	CCTTC	3 cut(s)	484, 1169, 1301
HpyCH4III	ACNGT	4 cut(s)	355, 1006, 1138, 1250
HpyCH4IV	ACGT	1 cut(s)	315
HpyCH4V	TGCA	8 cut(s)	4, 61, 727, 818, 901, 984, 1127, 1285
HpyF10VI	GCNNNNNNNGC	8 cut(s)	86, 218, 413, 601, 869, 1211, 1220, 1322
HpyF3I	CTNAG	6 cut(s)	654, 773, 797, 909, 1242, 1326
HpySE526I	ACGT	1 cut(s)	315
Hsp92II	CATG	6 cut(s)	68, 133, 604, 789, 1002, 1072
HspAI	GCGC	2 cut(s)	212, 1280
KspAI	GTTAAC	1 cut(s)	1134
KspI	CCGCGG	1 cut(s)	596
Kzo9I	GATC	3 cut(s)	205, 597, 988
LmnI	GCTCC	1 cut(s)	565
Lsp1109I	GCAGC	5 cut(s)	233, 1111, 1189, 1192, 1269
LweI	GCATC	5 cut(s)	129, 139, 403, 1054, 1303
MaeI	CTAG	2 cut(s)	153, 420
MaeII	ACGT	1 cut(s)	315
MaeIII	GTNAC	4 cut(s)	169, 309, 776, 811
MalI	GATC	3 cut(s)	207, 599, 990
MboI	GATC	3 cut(s)	205, 597, 988
MboII	GAAGA	7 cut(s)	272, 524, 588, 683, 710, 713, 1105
MflI	RGATCY	2 cut(s)	205, 988
MhlI	GDGCHC	4 cut(s)	18, 63, 774, 1166
MlsI	TGGCCA	2 cut(s)	504, 1192
MluCI	AATT	6 cut(s)	200, 239, 819, 852, 948, 1054
MluNI	TGGCCA	2 cut(s)	504, 1192
MlyI	GAGTC	3 cut(s)	23, 53, 675
MmeI	TCCRAC	2 cut(s)	409, 489
Mox20I	TGGCCA	2 cut(s)	504, 1192
MscI	TGGCCA	2 cut(s)	504, 1192
Msp20I	TGGCCA	2 cut(s)	504, 1192
MspA1I	CMGCKG	1 cut(s)	595
MspCI	CTTAAG	1 cut(s)	1012
MspI	CCGG	1 cut(s)	807
MspR9I	CCNGG	6 cut(s)	77, 446, 498, 564, 782, 1113
Mva1269I	GAATGC	1 cut(s)	190
MvaI	CCWGG	6 cut(s)	77, 446, 498, 564, 782, 1113
MvnI	CGCG	1 cut(s)	595
MwoI	GCNNNNNNNGC	8 cut(s)	86, 218, 413, 601, 869, 1211, 1220, 1322
NcoI	CCATGG	1 cut(s)	1068
NdeII	GATC	3 cut(s)	205, 597, 988
NlaIII	CATG	6 cut(s)	68, 133, 604, 789, 1002, 1072
NlaIV	GGNNCC	2 cut(s)	120, 495
NmeAIII	GCCGAG	2 cut(s)	389, 420
NmuCI	GTSAC	1 cut(s)	776
NsbI	TGCGCA	1 cut(s)	213
NspI	RCATGY	2 cut(s)	789, 1002
PaeI	GCATGC	1 cut(s)	789
PctI	GAATGC	1 cut(s)	190
PfeI	GAWTC	3 cut(s)	515, 905, 1096
PfoI	TCCNGGA	1 cut(s)	562
PkrI	GCNGC	6 cut(s)	223, 248, 1126, 1204, 1207, 1284
PleI	GAGTC	3 cut(s)	23, 52, 675
PpsI	GAGTC	3 cut(s)	23, 52, 675
PshAI	GACNNNNGTC	1 cut(s)	124
Psp124BI	GAGCTC	1 cut(s)	1166
Psp6I	CCWGG	6 cut(s)	75, 444, 496, 562, 780, 1111
PspFI	CCCAGC	1 cut(s)	217
PspGI	CCWGG	6 cut(s)	75, 444, 496, 562, 780, 1111
PspN4I	GGNNCC	2 cut(s)	120, 495
PspPI	GGNCC	5 cut(s)	119, 126, 436, 715, 1019
PstI	CTGCAG	1 cut(s)	1129
PsuI	RGATCY	2 cut(s)	205, 988
RsaI	GTAC	5 cut(s)	109, 476, 919, 1003, 1008
RsaNI	GTAC	5 cut(s)	108, 475, 918, 1002, 1007
SacI	GAGCTC	1 cut(s)	1166
SacII	CCGCGG	1 cut(s)	596
SatI	GCNGC	6 cut(s)	222, 247, 1125, 1203, 1206, 1283
Sau3AI	GATC	3 cut(s)	205, 597, 988
Sau96I	GGNCC	5 cut(s)	119, 126, 436, 715, 1019
ScaI	AGTACT	1 cut(s)	1008
SchI	GAGTC	3 cut(s)	23, 53, 675
ScrFI	CCNGG	6 cut(s)	77, 446, 498, 564, 782, 1113
SduI	GDGCHC	4 cut(s)	18, 63, 774, 1166
SfaNI	GCATC	5 cut(s)	129, 139, 403, 1054, 1303
SfcI	CTRYAG	2 cut(s)	1125, 1209
Sfr303I	CCGCGG	1 cut(s)	596
SgrBI	CCGCGG	1 cut(s)	596
SinI	GGWCC	4 cut(s)	119, 126, 436, 1019
SmlI	CTYRAG	3 cut(s)	23, 620, 1012
SmoI	CTYRAG	3 cut(s)	23, 620, 1012
SphI	GCATGC	1 cut(s)	789
Sse9I	AATT	6 cut(s)	200, 239, 819, 852, 948, 1054
SsiI	CCGC	5 cut(s)	40, 247, 593, 595, 826
SspMI	CTAG	2 cut(s)	153, 420
SstI	GAGCTC	1 cut(s)	1166
StyD4I	CCNGG	6 cut(s)	75, 444, 496, 562, 780, 1111
StyI	CCWWGG	4 cut(s)	114, 858, 993, 1068
TaaI	ACNGT	4 cut(s)	355, 1006, 1138, 1250
TaiI	ACGT	1 cut(s)	318
TaqI	TCGA	2 cut(s)	230, 321
TaqII	GACCGA	1 cut(s)	136
TasI	AATT	6 cut(s)	200, 239, 819, 852, 948, 1054
TatI	WGTACW	3 cut(s)	474, 1001, 1006
TauI	GCSGC	1 cut(s)	249
TfiI	GAWTC	3 cut(s)	515, 905, 1096
TscAI	CASTG	3 cut(s)	525, 781, 1155
TseFI	GTSAC	1 cut(s)	776
TseI	GCWGC	5 cut(s)	221, 1124, 1202, 1205, 1282
Tsp45I	GTSAC	1 cut(s)	776
TspDTI	ATGAA	5 cut(s)	273, 335, 405, 909, 961
TspGWI	ACGGA	1 cut(s)	95
TspRI	CASTG	3 cut(s)	525, 781, 1155
Vha464I	CTTAAG	1 cut(s)	1012
VneI	GTGCAC	1 cut(s)	59
VpaK11BI	GGWCC	4 cut(s)	119, 126, 436, 1019
XagI	CCTNNNNNAGG	1 cut(s)	443
XapI	RAATTY	1 cut(s)	1054
XceI	RCATGY	2 cut(s)	789, 1002
XspI	CTAG	2 cut(s)	153, 420
ZrmI	AGTACT	1 cut(s)	1008

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.