Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0005676

Physical Location & Seq

Genomic Coordinates Reverse (-)

86505595 .. 86510329

Gene Structure 4735 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG560200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGGATGAGTTTAATCTGCACTTAACAGGAGATATTCATGCAATAACAGCTGCAAACAATCTTCTAGCTGCTGCCATTGATACTCGAATGTTCCATGAAGCAACCCAATCAGATAAGGCTCTAATGAACCGATTATGCCCACCAAACAAAGAAGGAAAAAAGAGCTTTAATGATATCATGTTTAGACGTCTAAAGAAGCTGGGTATCTCCAAGACGCAGCCTGAGGACCTTACACCAGAAGAAGTTAAGAAATTTGCTAGGCTTGATATTGATCCAGATTCTATCACCTGGAGAAGAGTAATGGATATAAATGACCGGCTGTTGAGAAAAATAACAGTTGGCCAGGGCCCTGAAGAGAAAGGGATGGTGAGAGAAACAGGATTTGATATTTCAGTTGCCAGTGAGATAATGGCAGTTTTGGCCCTTACGACATCTCTAGCAGATATGAGGGAGAGGCTTGGCAAAATGGTAATCGGAAACAGCAGGGCTGGTGACCCAGTTACTGCCGACGATCTTGGTGTCGGAGGTGCATTAACGGTTCTAATGAAGGATGCTATTAACCCTACATTAATGCAGACTCTTGAGGGGACCCCAGTTCTTGTTCATGCTGGTCCTTTTGCAAATATTGCGCATGGAAATTCCTCCATTGTGGCTGATAAGATTGCGCTAAAGCTGGTGGGACCAGGTGGGTTTGTAGTCACAGAAGCTGGTTTTGGTGCTGATATTGGCACTGAGAAATTCATGAATATAAAATGCCGGTATAGTGGTTTAACACCGCAGTGCGCAATTATAGTTGCCACCATAAGGGCCTTGAAAATGCATGGTGGTGGCCCGGATGTTGTTGCTGGGAAGCCTCTTAATAGTGCCTACATAACTGAGAATGTGGCTCTGGTTGAGGCTGGCTGTGTGAATTTGGCCAGGCATATTGCAAATACAAAAGCCTATGGTGTGAATGTTGTTGTTGCCGTGAACAAGTTCTCAACTGACTCTGACGCAGAATTGAATGCAGTTCGAAATGCAGCACTGGCTGCTGGGGCGTATGATGCTGTGATATGTACTCACCATGCCCATGGTGGAAAAGGAGCGGTAGACCTAGGGATTGCGGTTCAGAAAGCCTGTGAGAATGTTACACAACCATTAAAGTTTTTATATCCTTTGGACTTCAGTATTAAAGAAAAGATAGAGGCAATAGCCAGGTCATATGGTGCAAGCGGTGTTGAATACTCGGAGCAGGCTGAAAAGCAGATTGCAATGTACAGCAGGCAAGGGTTTTCTGGTCTGCCAATATGCATGGCAAAGACCCAGTATTCATTTTCTGATAAAGCTACTGCGAAAGGAGCACCATCCAATTTTGTCTTACCGATAAGGGATGTGAGGGCAAGCATTGGAGCTGGATTTATATATCCTTTGGTAGGAACCATGAGCACAATGCCAGGACTTCCAACTAGGCCTTGCTTTTATGATATTGATCTTGACACCACCACTGGAAGGGTTATTGGTCTTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004329 GO:0004477 GO:0004488 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006082 GO:0006139 GO:0006144 GO:0006575 GO:0006725 GO:0006732 GO:0006760 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009112 GO:0009113 GO:0009256 GO:0009257 GO:0009396 GO:0009507 GO:0009536 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016053 GO:0016491 GO:0016645 GO:0016646 GO:0016787 GO:0016810 GO:0016814 GO:0016874 GO:0016879 GO:0018130 GO:0019238 GO:0019438 GO:0019752 GO:0034641 GO:0042221 GO:0042398 GO:0042440 GO:0042558 GO:0042559 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0043648 GO:0043650 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046112 GO:0046148 GO:0046394 GO:0046483 GO:0046653 GO:0046654 GO:0046686 GO:0046872 GO:0046914 GO:0048046 GO:0050896 GO:0051186 GO:0051188 GO:0055086 GO:0055114 GO:0071704 GO:0071944 GO:0072521 GO:0072522 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00670 ko00720 ko01100 ko01120 ko01200 map00670 map00720 map01100 map01120 map01200

Pfam Domains

Protein Families

FTHFS

Protein Analysis

502

Amino Acids

53.65

Weight (kDa)

7.13

Isoelectric Point (pI)

30.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FTHFS	PF01268	1 - 502	8.7e-198	Formate--tetrahydrofolate ligase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005676)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50480
fragaria_vesca	FvH4_3g44470 FvH4_3g44470 FvH4_3g44470 FvH4_3g44470 FvH4_3g44470 FvH4_3g44470 FvH4_3g44470
malus_domestica	MD03G1012400.v1.1 MD11G1015100.v1.1
prunus_persica	Prupe.6G013000_v2.0.a1 Prupe.6G013000_v2.0.a1 Prupe.6G013000_v2.0.a1
pyrus_communis	pycom03g01100 pycom11g01040
rosa_chinensis	RchiOBHm_Chr5g0081161
rosa_laevigata	RLG00000036914
rosa_multiflora	Rmu_sc0016124.1_g000001 Rmu_ssc0000432.1_g000078
rosa_roxburghii	Rroxscaffold_1G00002300
rosa_rugosa	Rorug05G0473600
rosa_samantha	Rh1DG124300 Rh5AG526200 Rh5BG550500 Rh5CG573400 Rh5DG560200
rosa_wichuraiana	Rw1G009600 Rw5G048890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	190
Acc16I	TGCGCA	2 cut(s)	630, 784
AccBSI	CCGCTC	1 cut(s)	1085
AccI	GTMKAC	1 cut(s)	1089
AciI	CCGC	4 cut(s)	776, 1085, 1103, 1212
AclWI	GGATC	1 cut(s)	266
AcoI	YGGCCR	2 cut(s)	340, 915
AcsI	RAATTY	4 cut(s)	251, 637, 737, 910
AcuI	CTGAAG	2 cut(s)	372, 1147
AcyI	GRCGYC	1 cut(s)	187
AfaI	GTAC	2 cut(s)	1057, 1256
AfiI	CCNNNNNNNGG	3 cut(s)	804, 1412, 1488
AgsI	TTSAA	3 cut(s)	814, 1003, 1220
AjnI	CCWGG	6 cut(s)	287, 342, 682, 917, 1193, 1432
AjuI	GAANNNNNNNTTGG	2 cut(s)	696, 728
AleI	CACNNNNGTG	1 cut(s)	778
AluBI	AGCT	8 cut(s)	50, 68, 165, 199, 673, 707, 1325, 1391
AluI	AGCT	8 cut(s)	50, 68, 165, 199, 673, 707, 1325, 1391
Alw21I	GWGCWC	2 cut(s)	1342, 1427
AlwI	GGATC	1 cut(s)	266
AlwNI	CAGNNNCTG	2 cut(s)	503, 707
AoxI	GGCC	7 cut(s)	340, 346, 420, 807, 829, 915, 1448
ApaI	GGGCCC	1 cut(s)	350
ApeKI	GCWGC	6 cut(s)	50, 68, 71, 217, 1019, 1028
ApoI	RAATTY	4 cut(s)	251, 637, 737, 910
AseI	ATTAAT	1 cut(s)	569
Asp700I	GAANNNNTTC	1 cut(s)	974
AspA2I	CCTAGG	1 cut(s)	1093
AspLEI	GCGC	3 cut(s)	631, 667, 785
AspS9I	GGNCC	9 cut(s)	226, 346, 347, 421, 588, 611, 680, 807, 830
AsuC2I	CCSGG	1 cut(s)	833
AsuHPI	GGTGA	4 cut(s)	277, 379, 503, 1052
AsuII	TTCGAA	1 cut(s)	1012
AvaII	GGWCC	4 cut(s)	226, 588, 611, 680
AvrII	CCTAGG	1 cut(s)	1093
AxyI	CCTNAGG	1 cut(s)	222
BaeGI	GKGCMC	1 cut(s)	350
BalI	TGGCCA	2 cut(s)	342, 917
BanII	GRGCYC	1 cut(s)	350
Bbv12I	GWGCWC	2 cut(s)	1342, 1427
BbvI	GCAGC	6 cut(s)	37, 55, 58, 229, 1015, 1031
BccI	CCATC	2 cut(s)	358, 1351
BceAI	ACGGC	1 cut(s)	950
BciT130I	CCWGG	6 cut(s)	289, 344, 684, 919, 1195, 1434
BcnI	CCSGG	1 cut(s)	833
BfaI	CTAG	5 cut(s)	65, 258, 437, 1094, 1446
BisI	GCNGC	6 cut(s)	51, 69, 72, 218, 1020, 1029
BlnI	CCTAGG	1 cut(s)	1093
BlsI	GCNGC	6 cut(s)	52, 70, 73, 219, 1021, 1030
Bme1390I	CCNGG	7 cut(s)	289, 344, 684, 833, 919, 1195, 1434
Bme18I	GGWCC	4 cut(s)	226, 588, 611, 680
BmgT120I	GGNCC	9 cut(s)	226, 346, 347, 421, 588, 611, 680, 807, 830
BmiI	GGNNCC	5 cut(s)	348, 589, 590, 681, 1417
BmrFI	CCNGG	7 cut(s)	289, 344, 684, 833, 919, 1195, 1434
BmrI	ACTGGG	3 cut(s)	491, 587, 1297
BmsI	GCATC	2 cut(s)	541, 1033
BmuI	ACTGGG	3 cut(s)	491, 587, 1297
BpmI	CTGGAG	1 cut(s)	310
Bpu14I	TTCGAA	1 cut(s)	1012
BpuEI	CTTGAG	1 cut(s)	602
BpuMI	CCSGG	1 cut(s)	833
BsaBI	GATNNNNATC	2 cut(s)	270, 1467
BsaHI	GRCGYC	1 cut(s)	187
BsaJI	CCNNGG	3 cut(s)	343, 1069, 1093
Bsc4I	CCNNNNNNNGG	3 cut(s)	804, 1412, 1488
Bse118I	RCCGGY	2 cut(s)	315, 756
Bse1I	ACTGG	6 cut(s)	399, 497, 593, 1029, 1303, 1489
Bse21I	CCTNAGG	1 cut(s)	222
Bse3DI	GCAATG	1 cut(s)	1257
Bse8I	GATNNNNATC	2 cut(s)	270, 1467
BseBI	CCWGG	6 cut(s)	289, 344, 684, 919, 1195, 1434
BseDI	CCNNGG	3 cut(s)	343, 1069, 1093
BseGI	GGATG	6 cut(s)	10, 369, 556, 841, 1343, 1375
BseJI	GATNNNNATC	2 cut(s)	270, 1467
BseLI	CCNNNNNNNGG	3 cut(s)	804, 1412, 1488
BseMI	GCAATG	1 cut(s)	1257
BseMII	CTCAG	3 cut(s)	213, 723, 867
BseNI	ACTGG	6 cut(s)	399, 497, 593, 1029, 1303, 1489
BseSI	GKGCMC	1 cut(s)	350
BseXI	GCAGC	6 cut(s)	37, 55, 58, 229, 1015, 1031
BseYI	CCCAGC	3 cut(s)	199, 845, 1031
BshFI	GGCC	7 cut(s)	342, 348, 422, 809, 831, 917, 1450
BsiHKAI	GWGCWC	2 cut(s)	1342, 1427
BsiSI	CCGG	3 cut(s)	316, 757, 833
BslFI	GGGAC	2 cut(s)	601, 693
BslI	CCNNNNNNNGG	3 cut(s)	804, 1412, 1488
BsmFI	GGGAC	2 cut(s)	601, 693
BsmI	GAATGC	1 cut(s)	1009
BsnI	GGCC	7 cut(s)	342, 348, 422, 809, 831, 917, 1450
Bsp119I	TTCGAA	1 cut(s)	1012
Bsp120I	GGGCCC	1 cut(s)	346
Bsp1286I	GDGCHC	3 cut(s)	350, 1342, 1427
Bsp1407I	TGTACA	1 cut(s)	1254
Bsp143I	GATC	3 cut(s)	271, 511, 1468
Bsp19I	CCATGG	1 cut(s)	1069
BspACI	CCGC	4 cut(s)	776, 1085, 1103, 1212
BspANI	GGCC	7 cut(s)	342, 348, 422, 809, 831, 917, 1450
BspCNI	CTCAG	3 cut(s)	214, 724, 868
BspHI	TCATGA	1 cut(s)	741
BspLI	GGNNCC	5 cut(s)	348, 589, 590, 681, 1417
BspPI	GGATC	1 cut(s)	266
BspT104I	TTCGAA	1 cut(s)	1012
BsrBI	CCGCTC	1 cut(s)	1085
BsrDI	GCAATG	1 cut(s)	1257
BsrFI	RCCGGY	2 cut(s)	315, 756
BsrGI	TGTACA	1 cut(s)	1254
BsrI	ACTGG	6 cut(s)	399, 497, 593, 1029, 1303, 1489
BssAI	RCCGGY	2 cut(s)	315, 756
BssECI	CCNNGG	3 cut(s)	343, 1069, 1093
BssMI	GATC	3 cut(s)	271, 511, 1468
BssNI	GRCGYC	1 cut(s)	187
BssT1I	CCWWGG	2 cut(s)	1069, 1093
Bst2UI	CCWGG	6 cut(s)	289, 344, 684, 919, 1195, 1434
Bst4CI	ACNGT	2 cut(s)	337, 538
Bst6I	CTCTTC	2 cut(s)	289, 348
BstACI	GRCGYC	1 cut(s)	187
BstAPI	GCANNNNNTGC	2 cut(s)	626, 1028
BstAUI	TGTACA	1 cut(s)	1254
BstBI	TTCGAA	1 cut(s)	1012
BstC8I	GCNNGC	5 cut(s)	901, 1210, 1233, 1262, 1381
BstDEI	CTNAG	3 cut(s)	222, 732, 876
BstDSI	CCRYGG	1 cut(s)	1069
BstEII	GGTNACC	1 cut(s)	491
BstENI	CCTNNNNNAGG	1 cut(s)	1410
BstF5I	GGATG	6 cut(s)	10, 369, 556, 841, 1343, 1375
BstHHI	GCGC	3 cut(s)	631, 667, 785
BstKTI	GATC	3 cut(s)	274, 514, 1471
BstMBI	GATC	3 cut(s)	271, 511, 1468
BstMWI	GCNNNNNNNGC	8 cut(s)	47, 419, 626, 1025, 1028, 1034, 1043, 1337
BstNI	CCWGG	6 cut(s)	289, 344, 684, 919, 1195, 1434
BstPI	GGTNACC	1 cut(s)	491
BstSCI	CCNGG	7 cut(s)	287, 342, 682, 831, 917, 1193, 1432
BstSLI	GKGCMC	1 cut(s)	350
BstV1I	GCAGC	6 cut(s)	37, 55, 58, 229, 1015, 1031
BstXI	CCANNNNNNTGG	1 cut(s)	1070
Bsu36I	CCTNAGG	1 cut(s)	222
BsuRI	GGCC	7 cut(s)	342, 348, 422, 809, 831, 917, 1450
BtgI	CCRYGG	1 cut(s)	1069
BtsCI	GGATG	6 cut(s)	10, 369, 556, 841, 1343, 1375
BtsI	GCAGTG	1 cut(s)	785
BtsIMutI	CAGTG	5 cut(s)	406, 729, 785, 1022, 1482
Cac8I	GCNNGC	5 cut(s)	901, 1210, 1233, 1262, 1381
CaiI	CAGNNNCTG	2 cut(s)	503, 707
CciI	TCATGA	1 cut(s)	741
CfoI	GCGC	3 cut(s)	631, 667, 785
Cfr10I	RCCGGY	2 cut(s)	315, 756
Cfr13I	GGNCC	9 cut(s)	226, 346, 347, 421, 588, 611, 680, 807, 830
CseI	GACGC	2 cut(s)	223, 1001
CsiI	ACCWGGT	1 cut(s)	682
Csp6I	GTAC	2 cut(s)	1056, 1255
CviQI	GTAC	2 cut(s)	1056, 1255
DdeI	CTNAG	3 cut(s)	222, 732, 876
DpnI	GATC	3 cut(s)	273, 513, 1470
DpnII	GATC	3 cut(s)	271, 511, 1468
EaeI	YGGCCR	2 cut(s)	340, 915
Eam1104I	CTCTTC	2 cut(s)	289, 348
EarI	CTCTTC	2 cut(s)	289, 348
Eco130I	CCWWGG	2 cut(s)	1069, 1093
Eco147I	AGGCCT	1 cut(s)	1450
Eco24I	GRGCYC	1 cut(s)	350
Eco32I	GATATC	1 cut(s)	175
Eco47I	GGWCC	4 cut(s)	226, 588, 611, 680
Eco57I	CTGAAG	2 cut(s)	372, 1147
Eco81I	CCTNAGG	1 cut(s)	222
Eco91I	GGTNACC	1 cut(s)	491
EcoNI	CCTNNNNNAGG	1 cut(s)	1410
EcoO109I	RGGNCCY	5 cut(s)	226, 346, 347, 588, 807
EcoO65I	GGTNACC	1 cut(s)	491
EcoRII	CCWGG	6 cut(s)	287, 342, 682, 917, 1193, 1432
EcoRV	GATATC	1 cut(s)	175
EcoT14I	CCWWGG	2 cut(s)	1069, 1093
EcoT22I	ATGCAT	2 cut(s)	822, 1292
EcoT38I	GRGCYC	1 cut(s)	350
ErhI	CCWWGG	2 cut(s)	1069, 1093
FaqI	GGGAC	2 cut(s)	601, 693
FauNDI	CATATG	1 cut(s)	1201
FblI	GTMKAC	1 cut(s)	1089
Fnu4HI	GCNGC	6 cut(s)	51, 69, 72, 218, 1020, 1029
FokI	GGATG	6 cut(s)	17, 376, 563, 848, 1330, 1382
FriOI	GRGCYC	1 cut(s)	350
Fsp4HI	GCNGC	6 cut(s)	51, 69, 72, 218, 1020, 1029
FspBI	CTAG	5 cut(s)	65, 258, 437, 1094, 1446
FspI	TGCGCA	2 cut(s)	630, 784
GlaI	GCGC	3 cut(s)	630, 666, 784
GluI	GCNGC	6 cut(s)	51, 69, 72, 218, 1020, 1029
GsaI	CCCAGC	3 cut(s)	203, 849, 1035
GsuI	CTGGAG	1 cut(s)	310
HaeIII	GGCC	7 cut(s)	342, 348, 422, 809, 831, 917, 1450
HapII	CCGG	3 cut(s)	316, 757, 833
HgaI	GACGC	2 cut(s)	223, 1001
HhaI	GCGC	3 cut(s)	631, 667, 785
Hin1I	GRCGYC	1 cut(s)	187
Hin6I	GCGC	3 cut(s)	629, 665, 783
HinP1I	GCGC	3 cut(s)	629, 665, 783
HinfI	GANTC	3 cut(s)	278, 577, 986
HpaII	CCGG	3 cut(s)	316, 757, 833
HphI	GGTGA	4 cut(s)	277, 379, 503, 1052
Hpy166II	GTNNAC	2 cut(s)	970, 1090
Hpy188I	TCNGA	7 cut(s)	112, 476, 524, 991, 1110, 1228, 1318
Hpy188III	TCNNGA	5 cut(s)	275, 581, 742, 1472, 1506
Hpy8I	GTNNAC	2 cut(s)	970, 1090
Hpy99I	CGWCG	1 cut(s)	512
HpyAV	CCTTC	3 cut(s)	146, 541, 1482
HpyCH4III	ACNGT	2 cut(s)	337, 538
HpyCH4IV	ACGT	1 cut(s)	187
HpyF10VI	GCNNNNNNNGC	8 cut(s)	47, 419, 626, 1025, 1028, 1034, 1043, 1337
HpyF3I	CTNAG	3 cut(s)	222, 732, 876
HpySE526I	ACGT	1 cut(s)	187
Hsp92I	GRCGYC	1 cut(s)	187
HspAI	GCGC	3 cut(s)	629, 665, 783
KflI	GGGWCCC	1 cut(s)	588
Kzo9I	GATC	3 cut(s)	271, 511, 1468
LmnI	GCTCC	4 cut(s)	1082, 1228, 1337, 1388
Lsp1109I	GCAGC	6 cut(s)	37, 55, 58, 229, 1015, 1031
LweI	GCATC	2 cut(s)	541, 1033
MabI	ACCWGGT	1 cut(s)	682
MaeI	CTAG	5 cut(s)	65, 258, 437, 1094, 1446
MaeII	ACGT	1 cut(s)	187
MaeIII	GTNAC	4 cut(s)	491, 499, 697, 1126
MalI	GATC	3 cut(s)	273, 513, 1470
MbiI	CCGCTC	1 cut(s)	1085
MboI	GATC	3 cut(s)	271, 511, 1468
MboII	GAAGA	4 cut(s)	53, 251, 306, 365
MhlI	GDGCHC	3 cut(s)	350, 1342, 1427
MlsI	TGGCCA	2 cut(s)	342, 917
MluCI	AATT	7 cut(s)	251, 637, 737, 786, 910, 998, 1348
MluNI	TGGCCA	2 cut(s)	342, 917
MlyI	GAGTC	2 cut(s)	571, 980
MmeI	TCCRAC	2 cut(s)	502, 1466
Mox20I	TGGCCA	2 cut(s)	342, 917
Mph1103I	ATGCAT	2 cut(s)	822, 1292
MroXI	GAANNNNTTC	1 cut(s)	974
MscI	TGGCCA	2 cut(s)	342, 917
MslI	CAYNNNNRTG	3 cut(s)	778, 825, 1068
Msp20I	TGGCCA	2 cut(s)	342, 917
MspA1I	CMGCKG	1 cut(s)	50
MspI	CCGG	3 cut(s)	316, 757, 833
MspR9I	CCNGG	7 cut(s)	289, 344, 684, 833, 919, 1195, 1434
Mva1269I	GAATGC	1 cut(s)	1009
MvaI	CCWGG	6 cut(s)	289, 344, 684, 919, 1195, 1434
MwoI	GCNNNNNNNGC	8 cut(s)	47, 419, 626, 1025, 1028, 1034, 1043, 1337
NciI	CCSGG	1 cut(s)	833
NcoI	CCATGG	1 cut(s)	1069
NdeI	CATATG	1 cut(s)	1201
NdeII	GATC	3 cut(s)	271, 511, 1468
NlaIV	GGNNCC	5 cut(s)	348, 589, 590, 681, 1417
NmuCI	GTSAC	2 cut(s)	491, 697
NsbI	TGCGCA	2 cut(s)	630, 784
NsiI	ATGCAT	2 cut(s)	822, 1292
NspV	TTCGAA	1 cut(s)	1012
OliI	CACNNNNGTG	1 cut(s)	778
PagI	TCATGA	1 cut(s)	741
PceI	AGGCCT	1 cut(s)	1450
PctI	GAATGC	1 cut(s)	1009
PdmI	GAANNNNTTC	1 cut(s)	974
PfeI	GAWTC	1 cut(s)	278
PkrI	GCNGC	6 cut(s)	52, 70, 73, 219, 1021, 1030
PleI	GAGTC	2 cut(s)	571, 980
PpsI	GAGTC	2 cut(s)	571, 980
PpuMI	RGGWCCY	2 cut(s)	226, 588
PshBI	ATTAAT	1 cut(s)	569
Psp5II	RGGWCCY	2 cut(s)	226, 588
Psp6I	CCWGG	6 cut(s)	287, 342, 682, 917, 1193, 1432
PspEI	GGTNACC	1 cut(s)	491
PspFI	CCCAGC	3 cut(s)	199, 845, 1031
PspGI	CCWGG	6 cut(s)	287, 342, 682, 917, 1193, 1432
PspN4I	GGNNCC	5 cut(s)	348, 589, 590, 681, 1417
PspOMI	GGGCCC	1 cut(s)	346
PspPI	GGNCC	9 cut(s)	226, 346, 347, 421, 588, 611, 680, 807, 830
PspPPI	RGGWCCY	2 cut(s)	226, 588
PstNI	CAGNNNCTG	2 cut(s)	503, 707
PvuII	CAGCTG	1 cut(s)	50
RsaI	GTAC	2 cut(s)	1057, 1256
RsaNI	GTAC	2 cut(s)	1056, 1255
RseI	CAYNNNNRTG	3 cut(s)	778, 825, 1068
SatI	GCNGC	6 cut(s)	51, 69, 72, 218, 1020, 1029
Sau3AI	GATC	3 cut(s)	271, 511, 1468
Sau96I	GGNCC	9 cut(s)	226, 346, 347, 421, 588, 611, 680, 807, 830
SchI	GAGTC	2 cut(s)	571, 980
ScrFI	CCNGG	7 cut(s)	289, 344, 684, 833, 919, 1195, 1434
SduI	GDGCHC	3 cut(s)	350, 1342, 1427
SexAI	ACCWGGT	1 cut(s)	682
SfaNI	GCATC	2 cut(s)	541, 1033
SfuI	TTCGAA	1 cut(s)	1012
SinI	GGWCC	4 cut(s)	226, 588, 611, 680
SmiMI	CAYNNNNRTG	3 cut(s)	778, 825, 1068
SmlI	CTYRAG	1 cut(s)	581
SmoI	CTYRAG	1 cut(s)	581
Sse9I	AATT	7 cut(s)	251, 637, 737, 786, 910, 998, 1348
SseBI	AGGCCT	1 cut(s)	1450
SsiI	CCGC	4 cut(s)	776, 1085, 1103, 1212
SspI	AATATT	1 cut(s)	625
SspMI	CTAG	5 cut(s)	65, 258, 437, 1094, 1446
StuI	AGGCCT	1 cut(s)	1450
StyD4I	CCNGG	7 cut(s)	287, 342, 682, 831, 917, 1193, 1432
StyI	CCWWGG	2 cut(s)	1069, 1093
TaaI	ACNGT	2 cut(s)	337, 538
TaiI	ACGT	1 cut(s)	190
TaqI	TCGA	2 cut(s)	85, 1012
TasI	AATT	7 cut(s)	251, 637, 737, 786, 910, 998, 1348
TatI	WGTACW	2 cut(s)	1055, 1254
TfiI	GAWTC	1 cut(s)	278
TscAI	CASTG	5 cut(s)	406, 736, 785, 1029, 1489
TseFI	GTSAC	2 cut(s)	491, 697
TseI	GCWGC	6 cut(s)	50, 68, 71, 217, 1019, 1028
Tsp45I	GTSAC	2 cut(s)	491, 697
TspDTI	ATGAA	8 cut(s)	26, 111, 140, 560, 593, 730, 758, 1299
TspRI	CASTG	5 cut(s)	406, 736, 785, 1029, 1489
VpaK11BI	GGWCC	4 cut(s)	226, 588, 611, 680
VspI	ATTAAT	1 cut(s)	569
XagI	CCTNNNNNAGG	1 cut(s)	1410
XapI	RAATTY	4 cut(s)	251, 637, 737, 910
XcmI	CCANNNNNNNNNTGG	2 cut(s)	406, 1070
XmaJI	CCTAGG	1 cut(s)	1093
XmiI	GTMKAC	1 cut(s)	1089
XmnI	GAANNNNTTC	1 cut(s)	974
XspI	CTAG	5 cut(s)	65, 258, 437, 1094, 1446
ZraI	GACGTC	1 cut(s)	188
Zsp2I	ATGCAT	2 cut(s)	822, 1292

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.