Rh6BG282800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
50565887 .. 50566048
162 bp
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UTR
Exon/CDS
Intron
Rh6BG282800.1

Sequence Viewer

Length: 162 bp
ATGGCAGTGGGTGATGAAGGAGAGGCAGGGGGTGAACTTGAGCCAGAGGCGGCGGAGCAAGTGTGGGCCGCAAGTGGAGGACACGGACTGGAGATAGGCCCAGGCGACCCGCTTGACGAGGCGGCTACGGATGGATATCTCGTAGCCGGAGTTGGTGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

53

Amino Acids

5.08

Weight (kDa)

4.05

Isoelectric Point (pI)

19.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 5 cut(s) 50, 53, 69, 110, 122
AjnI CCWGG 1 cut(s) 100
AoxI GGCC 2 cut(s) 66, 97
AspS9I GGNCC 2 cut(s) 66, 98
AsuHPI GGTGA 2 cut(s) 23, 44
BccI CCATC 1 cut(s) 125
BciT130I CCWGG 1 cut(s) 102
BisI GCNGC 3 cut(s) 51, 69, 123
BlsI GCNGC 3 cut(s) 52, 70, 124
Bme1390I CCNGG 1 cut(s) 102
BmgT120I GGNCC 2 cut(s) 66, 98
BmrFI CCNGG 1 cut(s) 102
BpmI CTGGAG 1 cut(s) 110
BpuEI CTTGAG 1 cut(s) 59
BsaBI GATNNNNATC 1 cut(s) 135
BsaJI CCNNGG 1 cut(s) 100
BsaXI ACNNNNNCTCC 2 cut(s) 47, 77
Bse1I ACTGG 1 cut(s) 93
Bse8I GATNNNNATC 1 cut(s) 135
BseBI CCWGG 1 cut(s) 102
BseDI CCNNGG 1 cut(s) 100
BseGI GGATG 1 cut(s) 136
BseJI GATNNNNATC 1 cut(s) 135
BseNI ACTGG 1 cut(s) 93
BshFI GGCC 2 cut(s) 68, 99
BsiSI CCGG 1 cut(s) 147
BsnI GGCC 2 cut(s) 68, 99
BspACI CCGC 5 cut(s) 50, 53, 69, 110, 122
BspANI GGCC 2 cut(s) 68, 99
BsrI ACTGG 1 cut(s) 93
BssECI CCNNGG 1 cut(s) 100
Bst2UI CCWGG 1 cut(s) 102
BstF5I GGATG 1 cut(s) 136
BstNI CCWGG 1 cut(s) 102
BstSCI CCNGG 1 cut(s) 100
BsuRI GGCC 2 cut(s) 68, 99
BtsCI GGATG 1 cut(s) 136
BtsI GCAGTG 1 cut(s) 12
BtsIMutI CAGTG 1 cut(s) 12
Cfr13I GGNCC 2 cut(s) 66, 98
CviJI RGCY 5 cut(s) 43, 68, 99, 125, 146
CviKI_1 RGCY 5 cut(s) 43, 68, 99, 125, 146
EciI GGCGGA 1 cut(s) 68
Eco32I GATATC 1 cut(s) 137
EcoRII CCWGG 1 cut(s) 100
EcoRV GATATC 1 cut(s) 137
FauI CCCGC 1 cut(s) 117
Fnu4HI GCNGC 3 cut(s) 51, 69, 123
FokI GGATG 1 cut(s) 143
Fsp4HI GCNGC 3 cut(s) 51, 69, 123
GluI GCNGC 3 cut(s) 51, 69, 123
GsuI CTGGAG 1 cut(s) 110
HaeIII GGCC 2 cut(s) 68, 99
HapII CCGG 1 cut(s) 147
HpaII CCGG 1 cut(s) 147
HphI GGTGA 2 cut(s) 23, 44
Hpy166II GTNNAC 1 cut(s) 35
Hpy8I GTNNAC 1 cut(s) 35
HpyAV CCTTC 1 cut(s) 11
LmnI GCTCC 1 cut(s) 55
LpnPI CCDG 5 cut(s) 12, 57, 74, 87, 114
MnlI CCTC 4 cut(s) 16, 40, 71, 112
MseI TTAA 1 cut(s) 160
MspI CCGG 1 cut(s) 147
MspR9I CCNGG 1 cut(s) 102
MvaI CCWGG 1 cut(s) 102
PkrI GCNGC 3 cut(s) 52, 70, 124
Psp6I CCWGG 1 cut(s) 100
PspGI CCWGG 1 cut(s) 100
PspPI GGNCC 2 cut(s) 66, 98
SaqAI TTAA 1 cut(s) 160
SatI GCNGC 3 cut(s) 51, 69, 123
Sau96I GGNCC 2 cut(s) 66, 98
ScrFI CCNGG 1 cut(s) 102
SmlI CTYRAG 1 cut(s) 38
SmoI CTYRAG 1 cut(s) 38
SsiI CCGC 5 cut(s) 50, 53, 69, 110, 122
StyD4I CCNGG 1 cut(s) 100
TauI GCSGC 3 cut(s) 53, 71, 125
Tru1I TTAA 1 cut(s) 160
Tru9I TTAA 1 cut(s) 160
TscAI CASTG 1 cut(s) 12
TspDTI ATGAA 1 cut(s) 30
TspGWI ACGGA 2 cut(s) 99, 143
TspRI CASTG 1 cut(s) 12
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.