Zinc finger HIT domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G28820 AT4G28820 AT4G28820 AT4G28820 AT4G28820 AT4G28820 |
| fragaria_vesca | FvH4_2g19780 |
| malus_domestica | MD05G1182200.v1.1 MD10G1170500.v1.1 |
| prunus_persica | Prupe.8G209000_v2.0.a1 |
| pyrus_communis | pycom05g16760 |
| rosa_chinensis | RchiOBHm_Chr6g0285481 |
| rosa_laevigata | RLG00000012636 |
| rosa_multiflora | Rmu_sc0000284.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00183110 |
| rosa_rugosa | Rorug06G0174800 |
| rosa_samantha | Rh6AG286400 Rh6BG287600 Rh6CG288700 Rh6DG281500 |
| rosa_wichuraiana | Rw6G024600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 20 |
| AcsI | RAATTY | 1 cut(s) | 162 |
| AcuI | CTGAAG | 2 cut(s) | 42, 126 |
| AflII | CTTAAG | 1 cut(s) | 305 |
| AgsI | TTSAA | 2 cut(s) | 178, 194 |
| AluBI | AGCT | 4 cut(s) | 62, 149, 251, 310 |
| AluI | AGCT | 4 cut(s) | 62, 149, 251, 310 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 65 |
| AoxI | GGCC | 1 cut(s) | 89 |
| ApeKI | GCWGC | 3 cut(s) | 62, 65, 130 |
| ApoI | RAATTY | 1 cut(s) | 162 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 189 |
| AsuII | TTCGAA | 1 cut(s) | 271 |
| BbsI | GAAGAC | 1 cut(s) | 182 |
| BbvI | GCAGC | 3 cut(s) | 49, 52, 142 |
| BccI | CCATC | 1 cut(s) | 306 |
| BceAI | ACGGC | 1 cut(s) | 101 |
| BfaI | CTAG | 2 cut(s) | 137, 156 |
| BfmI | CTRYAG | 1 cut(s) | 144 |
| BfrI | CTTAAG | 1 cut(s) | 305 |
| BisI | GCNGC | 3 cut(s) | 63, 66, 131 |
| BlsI | GCNGC | 3 cut(s) | 64, 67, 132 |
| BmsI | GCATC | 2 cut(s) | 160, 217 |
| BpiI | GAAGAC | 1 cut(s) | 182 |
| BpmI | CTGGAG | 2 cut(s) | 54, 207 |
| Bpu14I | TTCGAA | 1 cut(s) | 271 |
| BseGI | GGATG | 1 cut(s) | 262 |
| BseXI | GCAGC | 3 cut(s) | 49, 52, 142 |
| BshFI | GGCC | 1 cut(s) | 91 |
| BslFI | GGGAC | 1 cut(s) | 18 |
| BsmFI | GGGAC | 1 cut(s) | 18 |
| BsnI | GGCC | 1 cut(s) | 91 |
| Bsp119I | TTCGAA | 1 cut(s) | 271 |
| BspACI | CCGC | 1 cut(s) | 20 |
| BspANI | GGCC | 1 cut(s) | 91 |
| BspT104I | TTCGAA | 1 cut(s) | 271 |
| BspTI | CTTAAG | 1 cut(s) | 305 |
| Bst4CI | ACNGT | 2 cut(s) | 32, 100 |
| BstAFI | CTTAAG | 1 cut(s) | 305 |
| BstBI | TTCGAA | 1 cut(s) | 271 |
| BstF5I | GGATG | 1 cut(s) | 262 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 127 |
| BstSFI | CTRYAG | 1 cut(s) | 144 |
| BstV1I | GCAGC | 3 cut(s) | 49, 52, 142 |
| BstV2I | GAAGAC | 1 cut(s) | 182 |
| BsuRI | GGCC | 1 cut(s) | 91 |
| BtgZI | GCGATG | 1 cut(s) | 183 |
| BtsCI | GGATG | 1 cut(s) | 262 |
| BtsIMutI | CAGTG | 1 cut(s) | 84 |
| CaiI | CAGNNNCTG | 1 cut(s) | 65 |
| CviJI | RGCY | 6 cut(s) | 62, 91, 143, 149, 251, 310 |
| CviKI_1 | RGCY | 6 cut(s) | 62, 91, 143, 149, 251, 310 |
| Eco57I | CTGAAG | 2 cut(s) | 42, 126 |
| FaiI | YATR | 5 cut(s) | 9, 41, 146, 212, 254 |
| FaqI | GGGAC | 1 cut(s) | 18 |
| FauI | CCCGC | 1 cut(s) | 13 |
| Fnu4HI | GCNGC | 3 cut(s) | 63, 66, 131 |
| FokI | GGATG | 1 cut(s) | 269 |
| Fsp4HI | GCNGC | 3 cut(s) | 63, 66, 131 |
| FspBI | CTAG | 2 cut(s) | 137, 156 |
| GluI | GCNGC | 3 cut(s) | 63, 66, 131 |
| GsuI | CTGGAG | 2 cut(s) | 54, 207 |
| HaeIII | GGCC | 1 cut(s) | 91 |
| HindIII | AAGCTT | 1 cut(s) | 308 |
| HinfI | GANTC | 2 cut(s) | 74, 198 |
| Hpy188III | TCNNGA | 2 cut(s) | 71, 224 |
| HpyCH4III | ACNGT | 2 cut(s) | 32, 100 |
| HpyCH4V | TGCA | 1 cut(s) | 230 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 127 |
| LmnI | GCTCC | 1 cut(s) | 73 |
| LpnPI | CCDG | 3 cut(s) | 84, 107, 237 |
| Lsp1109I | GCAGC | 3 cut(s) | 49, 52, 142 |
| LweI | GCATC | 2 cut(s) | 160, 217 |
| MaeI | CTAG | 2 cut(s) | 137, 156 |
| MaeIII | GTNAC | 1 cut(s) | 100 |
| MboII | GAAGA | 4 cut(s) | 48, 144, 182, 293 |
| MluCI | AATT | 1 cut(s) | 162 |
| MlyI | GAGTC | 1 cut(s) | 192 |
| MnlI | CCTC | 1 cut(s) | 133 |
| MroXI | GAANNNNTTC | 1 cut(s) | 189 |
| MseI | TTAA | 1 cut(s) | 306 |
| MspA1I | CMGCKG | 1 cut(s) | 62 |
| MspCI | CTTAAG | 1 cut(s) | 305 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 127 |
| NspV | TTCGAA | 1 cut(s) | 271 |
| PdmI | GAANNNNTTC | 1 cut(s) | 189 |
| PfeI | GAWTC | 1 cut(s) | 74 |
| PkrI | GCNGC | 3 cut(s) | 64, 67, 132 |
| PleI | GAGTC | 1 cut(s) | 192 |
| PpsI | GAGTC | 1 cut(s) | 192 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 202, 234 |
| PstNI | CAGNNNCTG | 1 cut(s) | 65 |
| PvuII | CAGCTG | 1 cut(s) | 62 |
| SaqAI | TTAA | 1 cut(s) | 306 |
| SatI | GCNGC | 3 cut(s) | 63, 66, 131 |
| SchI | GAGTC | 1 cut(s) | 192 |
| SetI | ASST | 5 cut(s) | 64, 151, 253, 291, 312 |
| SfaNI | GCATC | 2 cut(s) | 160, 217 |
| SfcI | CTRYAG | 1 cut(s) | 144 |
| SfuI | TTCGAA | 1 cut(s) | 271 |
| SmlI | CTYRAG | 1 cut(s) | 305 |
| SmoI | CTYRAG | 1 cut(s) | 305 |
| Sse9I | AATT | 1 cut(s) | 162 |
| SsiI | CCGC | 1 cut(s) | 20 |
| SspI | AATATT | 1 cut(s) | 276 |
| SspMI | CTAG | 2 cut(s) | 137, 156 |
| TaaI | ACNGT | 2 cut(s) | 32, 100 |
| TaqI | TCGA | 2 cut(s) | 84, 271 |
| TasI | AATT | 1 cut(s) | 162 |
| TfiI | GAWTC | 1 cut(s) | 74 |
| Tru1I | TTAA | 1 cut(s) | 306 |
| Tru9I | TTAA | 1 cut(s) | 306 |
| TscAI | CASTG | 1 cut(s) | 84 |
| TseI | GCWGC | 3 cut(s) | 62, 65, 130 |
| TspDTI | ATGAA | 2 cut(s) | 198, 252 |
| TspRI | CASTG | 1 cut(s) | 84 |
| Vha464I | CTTAAG | 1 cut(s) | 305 |
| XapI | RAATTY | 1 cut(s) | 162 |
| XmnI | GAANNNNTTC | 1 cut(s) | 189 |
| XspI | CTAG | 2 cut(s) | 137, 156 |